RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 CRACR2AQ9BSW2 395 aa8.15□□□□□ -1.1
CTNND1-236ENST00000533667 RAB34Q9BZG1 259 aa8.15□□□□□ -1.1
CTNND1-236ENST00000533667 CGNQ9P2M7 1197 aaKnown RBP8.15□□□□□ -1.1
CTNND1-236ENST00000533667 ARHGEF11O15085 1522 aa8.15□□□□□ -1.1
CTNND1-236ENST00000533667 TNPO1Q92973 898 aaKnown RBP8.15□□□□□ -1.1
CTNND1-236ENST00000533667 DDX11Q96FC9 970 aa8.15□□□□□ -1.1
CTNND1-236ENST00000533667 NESP48681 1621 aa8.15□□□□□ -1.11
CTNND1-236ENST00000533667 POTEJP0CG39 1038 aa8.15□□□□□ -1.11
CTNND1-236ENST00000533667 CCDC102AQ96A19 550 aa8.15□□□□□ -1.11
CTNND1-236ENST00000533667 TSG101Q99816 390 aa8.15□□□□□ -1.11
CTNND1-236ENST00000533667 HMG20BQ9P0W2 317 aa8.15□□□□□ -1.11
CTNND1-236ENST00000533667 DBF4Q9UBU7 674 aaPredicted RBP8.15□□□□□ -1.11
CTNND1-236ENST00000533667 RALGAPBQ86X10 1494 aa8.15□□□□□ -1.11
CTNND1-236ENST00000533667 UNC13AQ9UPW8 1703 aa8.15□□□□□ -1.11
CTNND1-236ENST00000533667 TOP1P11387 765 aaKnown RBP8.14□□□□□ -1.11
CTNND1-236ENST00000533667 SKIDA1Q1XH10 827 aa8.14□□□□□ -1.11
CTNND1-236ENST00000533667 VPS36Q86VN1 386 aa8.14□□□□□ -1.11
CTNND1-236ENST00000533667 SMAP1Q8IYB5 467 aaPredicted RBP8.14□□□□□ -1.11
CTNND1-236ENST00000533667 LRRFIP2Q9Y608 721 aaKnown RBP8.14□□□□□ -1.11
CTNND1-236ENST00000533667 ANKRD36BQ8N2N9 1353 aa8.14□□□□□ -1.11
CTNND1-236ENST00000533667 CC2D2AQ9P2K1 1620 aa8.14□□□□□ -1.11
CTNND1-236ENST00000533667 MAP3K12Q12852 859 aa8.14□□□□□ -1.11
CTNND1-236ENST00000533667 GIMAP7Q8NHV1 300 aa8.14□□□□□ -1.11
CTNND1-236ENST00000533667 TRIM27P14373 513 aa8.14□□□□□ -1.11
CTNND1-236ENST00000533667 MCM10Q7L590 875 aa8.14□□□□□ -1.11
CTNND1-236ENST00000533667 CTCFLQ8NI51 663 aaPredicted RBP8.14□□□□□ -1.11
CTNND1-236ENST00000533667 SEC63Q9UGP8 760 aaKnown RBP8.14□□□□□ -1.11
CTNND1-236ENST00000533667 SSBP05455 408 aaKnown RBP eCLIP8.14□□□□□ -1.111e-7■■■■■ 26.8
CTNND1-236ENST00000533667 HDAC1Q13547 482 aaPredicted RBP8.14□□□□□ -1.11
CTNND1-236ENST00000533667 ENOX2Q16206 610 aaKnown RBP8.14□□□□□ -1.11
CTNND1-236ENST00000533667 CAVIN4Q5BKX8 364 aa8.14□□□□□ -1.11
CTNND1-236ENST00000533667 NAPBQ9H115 298 aa8.14□□□□□ -1.11
CTNND1-236ENST00000533667 ECHDC1Q9NTX5 307 aa8.14□□□□□ -1.11
CTNND1-236ENST00000533667 CLIP2Q9UDT6 1046 aa8.14□□□□□ -1.11
CTNND1-236ENST00000533667 CASQ1P31415 396 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 GBP2P32456 591 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-236ENST00000533667 KLHL40Q2TBA0 621 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 FERMT3Q86UX7 667 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 TBC1D32Q96NH3 1257 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 INCENPQ9NQS7 918 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 ZNF76P36508 570 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 CAMK4Q16566 473 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 STX1AQ16623 288 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 C20orf194Q5TEA3 1177 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 SHTN1A0MZ66 631 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 USO1O60763 962 aaKnown RBP8.13□□□□□ -1.11
CTNND1-236ENST00000533667 SSFA2P28290 1259 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 GTF2A1P52655 376 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-236ENST00000533667 IQCA1Q86XH1 822 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 SLC26A8Q96RN1 970 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 FAM107BQ9H098 131 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 BOLA2Q9H3K6 86 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 ZNF213O14771 459 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 SMARCA5O60264 1052 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-236ENST00000533667 TNIP1Q15025 636 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 TTF1Q15361 905 aaPredicted RBP8.13□□□□□ -1.11
CTNND1-236ENST00000533667 KANK3Q6NY19 840 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 DNAI2Q9GZS0 605 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 PIK3R4Q99570 1358 aa8.13□□□□□ -1.11
CTNND1-236ENST00000533667 UBE2HP62256 183 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 MPNDQ8N594 471 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 TIGD1Q96MW7 591 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 SLC12A7Q9Y666 1083 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 C11orf95C9JLR9 678 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-236ENST00000533667 WASLO00401 505 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-236ENST00000533667 STX6O43752 255 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 RAPGEF3O95398 923 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 YEATS4O95619 227 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 SLC5A1P13866 664 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 FLIIQ13045 1269 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 IFIT5Q13325 482 aaKnown RBP8.12□□□□□ -1.11
CTNND1-236ENST00000533667 TMEM266Q2M3C6 531 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 ZSCAN16Q9H4T2 348 aaPredicted RBP8.12□□□□□ -1.11
CTNND1-236ENST00000533667 TRIM21P19474 475 aaKnown RBP8.12□□□□□ -1.11
CTNND1-236ENST00000533667 SSRP1Q08945 709 aaKnown RBP8.12□□□□□ -1.11
CTNND1-236ENST00000533667 TBC1D9Q6ZT07 1266 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 THUMPD2Q9BTF0 503 aaKnown RBP8.12□□□□□ -1.11
CTNND1-236ENST00000533667 CENPHQ9H3R5 247 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 SEPT11Q9NVA2 429 aaKnown RBP8.12□□□□□ -1.11
CTNND1-236ENST00000533667 TMOD2Q9NZR1 351 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 SETSIPP0DME0 302 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 KIF4BQ2VIQ3 1234 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 TTC22Q5TAA0 569 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 PRIMPOLQ96LW4 560 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 MYD88Q99836 296 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 LAMC3Q9Y6N6 1575 aa8.12□□□□□ -1.11
CTNND1-236ENST00000533667 ADGRL1O94910 1474 aa8.11□□□□□ -1.11
CTNND1-236ENST00000533667 PAFAH1B1P43034 410 aa8.11□□□□□ -1.11
CTNND1-236ENST00000533667 ANAPC15P60006 121 aa8.11□□□□□ -1.11
CTNND1-236ENST00000533667 TAX1BP1Q86VP1 789 aa8.11□□□□□ -1.11
CTNND1-236ENST00000533667 SLF2Q8IX21 1173 aa8.11□□□□□ -1.11
CTNND1-236ENST00000533667 TEX13AQ9BXU3 409 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-236ENST00000533667 TMOD3Q9NYL9 352 aa8.11□□□□□ -1.11
CTNND1-236ENST00000533667 NUP160Q12769 1436 aa8.11□□□□□ -1.11
CTNND1-236ENST00000533667 BAG4O95429 457 aaKnown RBP8.11□□□□□ -1.11
CTNND1-236ENST00000533667 DHX37Q8IY37 1157 aaKnown RBP8.11□□□□□ -1.11
CTNND1-236ENST00000533667 CCDC150Q8NCX0 1101 aa8.11□□□□□ -1.11
CTNND1-236ENST00000533667 CNNM3Q8NE01 707 aa8.11□□□□□ -1.11
CTNND1-236ENST00000533667 CCDC12Q8WUD4 166 aaPredicted RBP8.11□□□□□ -1.11
CTNND1-236ENST00000533667 ZHX1Q9UKY1 873 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms