RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 ARHGEF1Q92888 912 aaKnown RBP22.52■■□□□ 1.2
CTSB-229ENST00000533572 ZNF496Q96IT1 587 aaPredicted RBP22.52■■□□□ 1.2
CTSB-229ENST00000533572 MYH14Q7Z406 1995 aaKnown RBP22.52■■□□□ 1.2
CTSB-229ENST00000533572 CYP19A1P11511 503 aaPredicted RBP22.51■■□□□ 1.19
CTSB-229ENST00000533572 CCDC27Q2M243 656 aa22.51■■□□□ 1.19
CTSB-229ENST00000533572 TEX13AQ9BXU3 409 aaPredicted RBP22.51■■□□□ 1.19
CTSB-229ENST00000533572 HEG1Q9ULI3 1381 aa22.5■■□□□ 1.19
CTSB-229ENST00000533572 YY1P25490 414 aa22.5■■□□□ 1.19
CTSB-229ENST00000533572 INTS5Q6P9B9 1019 aaKnown RBP22.49■■□□□ 1.19
CTSB-229ENST00000533572 NLGN1Q8N2Q7 840 aa22.49■■□□□ 1.19
CTSB-229ENST00000533572 CALD1Q05682 793 aaKnown RBP22.48■■□□□ 1.19
CTSB-229ENST00000533572 TAF7Q15545 349 aaPredicted RBP22.48■■□□□ 1.19
CTSB-229ENST00000533572 NEUROD2Q15784 382 aa22.48■■□□□ 1.19
CTSB-229ENST00000533572 DLG5Q8TDM6 1919 aa22.48■■□□□ 1.19
CTSB-229ENST00000533572 ZBTB1Q9Y2K1 713 aa22.47■■□□□ 1.19
CTSB-229ENST00000533572 KCNQ3O43525 872 aa22.46■■□□□ 1.19
CTSB-229ENST00000533572 MMP10P09238 476 aa22.46■■□□□ 1.19
CTSB-229ENST00000533572 NPM2Q86SE8 214 aaKnown RBP22.46■■□□□ 1.19
CTSB-229ENST00000533572 RRP7AQ9Y3A4 280 aaKnown RBP22.46■■□□□ 1.19
CTSB-229ENST00000533572 SOS1Q07889 1333 aaPredicted RBP22.46■■□□□ 1.19
CTSB-229ENST00000533572 ZPR1O75312 459 aa22.45■■□□□ 1.18
CTSB-229ENST00000533572 GYS1P13807 737 aa22.45■■□□□ 1.18
CTSB-229ENST00000533572 CANXP27824 592 aaKnown RBP22.45■■□□□ 1.18
CTSB-229ENST00000533572 C4AP0C0L4 1744 aa22.45■■□□□ 1.18
CTSB-229ENST00000533572 COL15A1P39059 1388 aa22.44■■□□□ 1.18
CTSB-229ENST00000533572 USP42Q9H9J4 1324 aaKnown RBP22.44■■□□□ 1.18
CTSB-229ENST00000533572 CD2APQ9Y5K6 639 aa22.44■■□□□ 1.18
CTSB-229ENST00000533572 SRP68Q9UHB9 627 aaKnown RBP22.43■■□□□ 1.18
CTSB-229ENST00000533572 TRIM35Q9UPQ4 493 aa22.43■■□□□ 1.18
CTSB-229ENST00000533572 A0A087WZG4 1122 aa22.42■■□□□ 1.18
CTSB-229ENST00000533572 SNRPA1P09661 255 aaKnown RBP22.42■■□□□ 1.18
CTSB-229ENST00000533572 PELP1Q8IZL8 1130 aaKnown RBP22.42■■□□□ 1.18
CTSB-229ENST00000533572 NLGN2Q8NFZ4 835 aa22.42■■□□□ 1.18
CTSB-229ENST00000533572 THUMPD2Q9BTF0 503 aaKnown RBP22.42■■□□□ 1.18
CTSB-229ENST00000533572 ZNF330Q9Y3S2 320 aaPredicted RBP22.42■■□□□ 1.18
CTSB-229ENST00000533572 PARP3Q9Y6F1 533 aa22.42■■□□□ 1.18
CTSB-229ENST00000533572 HNRNPUQ00839 825 aaKnown RBP eCLIP22.41■■□□□ 1.18
CTSB-229ENST00000533572 GPR162Q16538 588 aa22.41■■□□□ 1.18
CTSB-229ENST00000533572 WDR63Q8IWG1 891 aa22.41■■□□□ 1.18
CTSB-229ENST00000533572 WWC1Q8IX03 1113 aa22.41■■□□□ 1.18
CTSB-229ENST00000533572 MIS18AQ9NYP9 233 aa22.41■■□□□ 1.18
CTSB-229ENST00000533572 USPL1Q5W0Q7 1092 aa22.4■■□□□ 1.18
CTSB-229ENST00000533572 BABAM1Q9NWV8 329 aa22.4■■□□□ 1.18
CTSB-229ENST00000533572 NARFQ9UHQ1 456 aa22.39■■□□□ 1.17
CTSB-229ENST00000533572 IL16Q14005 1332 aa22.38■■□□□ 1.17
CTSB-229ENST00000533572 FKBP8Q14318 412 aa22.38■■□□□ 1.17
CTSB-229ENST00000533572 A1BGP04217 495 aa22.37■■□□□ 1.17
CTSB-229ENST00000533572 IL6STP40189 918 aaPredicted RBP22.37■■□□□ 1.17
CTSB-229ENST00000533572 EIF5P55010 431 aaKnown RBP22.37■■□□□ 1.17
CTSB-229ENST00000533572 TSPYL4Q9UJ04 414 aa22.37■■□□□ 1.17
CTSB-229ENST00000533572 SALL2Q9Y467 1007 aaPredicted RBP22.37■■□□□ 1.17
CTSB-229ENST00000533572 USP16Q9Y5T5 823 aa22.37■■□□□ 1.17
CTSB-229ENST00000533572 PRAMEF22A3QJZ6 481 aa22.35■■□□□ 1.17
CTSB-229ENST00000533572 GNAI1P63096 354 aa22.35■■□□□ 1.17
CTSB-229ENST00000533572 KDM3BQ7LBC6 1761 aa22.35■■□□□ 1.17
CTSB-229ENST00000533572 ZBED9Q6R2W3 1325 aa22.34■■□□□ 1.17
CTSB-229ENST00000533572 ZNF521Q96K83 1311 aa22.34■■□□□ 1.17
CTSB-229ENST00000533572 CFAP44Q96MT7 982 aa22.34■■□□□ 1.17
CTSB-229ENST00000533572 IFT57Q9NWB7 429 aa22.34■■□□□ 1.17
CTSB-229ENST00000533572 EIF4A1P60842 406 aaKnown RBP22.32■■□□□ 1.16
CTSB-229ENST00000533572 GOLGA2Q08379 1002 aa22.32■■□□□ 1.16
CTSB-229ENST00000533572 TBC1D2BQ9UPU7 963 aa22.32■■□□□ 1.16
CTSB-229ENST00000533572 C10orf71Q711Q0 1435 aa22.31■■□□□ 1.16
CTSB-229ENST00000533572 PIP4K2AP48426 406 aaPredicted RBP22.31■■□□□ 1.16
CTSB-229ENST00000533572 UTRNP46939 3433 aa22.3■■□□□ 1.16
CTSB-229ENST00000533572 CHL1O00533 1208 aa22.3■■□□□ 1.16
CTSB-229ENST00000533572 GRIN3BO60391 1043 aa22.3■■□□□ 1.16
CTSB-229ENST00000533572 GIGYF1O75420 1035 aaPredicted RBP22.3■■□□□ 1.16
CTSB-229ENST00000533572 DDR1Q08345 913 aa22.3■■□□□ 1.16
CTSB-229ENST00000533572 DZIP3Q86Y13 1208 aaKnown RBP22.3■■□□□ 1.16
CTSB-229ENST00000533572 LAS1LQ9Y4W2 734 aaKnown RBP22.3■■□□□ 1.16
CTSB-229ENST00000533572 LAMB4A4D0S4 1761 aa22.3■■□□□ 1.16
CTSB-229ENST00000533572 SENP3-EIF4A1A0A087X0R7 540 aa22.29■■□□□ 1.16
CTSB-229ENST00000533572 POLRMTO00411 1230 aaKnown RBP22.29■■□□□ 1.16
CTSB-229ENST00000533572 ZNF853P0CG23 659 aa22.29■■□□□ 1.16
CTSB-229ENST00000533572 TM4SF1P30408 202 aa22.29■■□□□ 1.16
CTSB-229ENST00000533572 TGFB2P61812 414 aa22.29■■□□□ 1.16
CTSB-229ENST00000533572 NFIXQ14938 502 aa22.29■■□□□ 1.16
CTSB-229ENST00000533572 MYH16Q9H6N6 1097 aa22.29■■□□□ 1.16
CTSB-229ENST00000533572 E9PSI1 815 aa22.28■■□□□ 1.16
CTSB-229ENST00000533572 BICDL1Q6ZP65 573 aa22.28■■□□□ 1.16
CTSB-229ENST00000533572 BCL2L12Q9HB09 334 aa22.28■■□□□ 1.16
CTSB-229ENST00000533572 SCN7AQ01118 1682 aa22.27■■□□□ 1.16
CTSB-229ENST00000533572 WWC3Q9ULE0 1092 aa22.26■■□□□ 1.15
CTSB-229ENST00000533572 ZNF652Q9Y2D9 606 aa22.26■■□□□ 1.15
CTSB-229ENST00000533572 KIF13BQ9NQT8 1826 aa22.26■■□□□ 1.15
CTSB-229ENST00000533572 NBPF26B4DH59 902 aa22.25■■□□□ 1.15
CTSB-229ENST00000533572 CAMTA2O94983 1202 aa22.25■■□□□ 1.15
CTSB-229ENST00000533572 SERPINB2P05120 415 aa22.25■■□□□ 1.15
CTSB-229ENST00000533572 YBX3P16989 372 aaKnown RBP eCLIP22.25■■□□□ 1.15
CTSB-229ENST00000533572 NBPF10Q6P3W6 841 aaKnown RBP22.25■■□□□ 1.15
CTSB-229ENST00000533572 NBPF15Q8N660 670 aa22.25■■□□□ 1.15
CTSB-229ENST00000533572 PXDNLA1KZ92 1463 aa22.25■■□□□ 1.15
CTSB-229ENST00000533572 NPHP1O15259 732 aa22.24■■□□□ 1.15
CTSB-229ENST00000533572 TBC1D9BQ66K14 1250 aa22.24■■□□□ 1.15
CTSB-229ENST00000533572 A0A0G2JLW4 131 aa22.23■■□□□ 1.15
CTSB-229ENST00000533572 SETDB2Q96T68 719 aa22.23■■□□□ 1.15
CTSB-229ENST00000533572 MBIPQ9NS73 344 aa22.23■■□□□ 1.15
CTSB-229ENST00000533572 ERBB4Q15303 1308 aa22.23■■□□□ 1.15
CTSB-229ENST00000533572 CARMIL3Q8ND23 1372 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms