RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-215ENST00000533408 DBF4Q9UBU7 674 aaPredicted RBP27.14■■□□□ 1.94
PTP4A2-215ENST00000533408 KRT24Q2M2I5 525 aa27.13■■□□□ 1.93
PTP4A2-215ENST00000533408 TSPYL6Q8N831 410 aa27.13■■□□□ 1.93
PTP4A2-215ENST00000533408 LRRC4BQ9NT99 713 aa27.13■■□□□ 1.93
PTP4A2-215ENST00000533408 CCDC87Q9NVE4 849 aa27.13■■□□□ 1.93
PTP4A2-215ENST00000533408 CNTNAP4Q9C0A0 1308 aa27.13■■□□□ 1.93
PTP4A2-215ENST00000533408 AK7Q96M32 723 aa27.12■■□□□ 1.93
PTP4A2-215ENST00000533408 CICQ96RK0 1608 aaPredicted RBP27.12■■□□□ 1.93
PTP4A2-215ENST00000533408 CRKLP46109 303 aaKnown RBP27.1■■□□□ 1.93
PTP4A2-215ENST00000533408 ALDH1L2Q3SY69 923 aa27.1■■□□□ 1.93
PTP4A2-215ENST00000533408 LINC00116Q8NCU8 138 aa27.1■■□□□ 1.93
PTP4A2-215ENST00000533408 EP400Q96L91 3159 aa27.09■■□□□ 1.93
PTP4A2-215ENST00000533408 HYPKQ9NX55 129 aa27.09■■□□□ 1.93
PTP4A2-215ENST00000533408 PRAMEF22A3QJZ6 481 aa27.08■■□□□ 1.93
PTP4A2-215ENST00000533408 KCNQ4P56696 695 aa27.08■■□□□ 1.93
PTP4A2-215ENST00000533408 FLAD1Q8NFF5 587 aa27.08■■□□□ 1.93
PTP4A2-215ENST00000533408 DDX21Q9NR30 783 aaKnown RBP eCLIP27.08■■□□□ 1.93
PTP4A2-215ENST00000533408 STK32BQ9NY57 414 aa27.08■■□□□ 1.93
PTP4A2-215ENST00000533408 RTCBQ9Y3I0 505 aaKnown RBP27.08■■□□□ 1.93
PTP4A2-215ENST00000533408 IL6STP40189 918 aaPredicted RBP27.07■■□□□ 1.92
PTP4A2-215ENST00000533408 A0A087WZG4 1122 aa27.06■■□□□ 1.92
PTP4A2-215ENST00000533408 RPS6KA4O75676 772 aa27.06■■□□□ 1.92
PTP4A2-215ENST00000533408 ADRA2BP18089 450 aa27.06■■□□□ 1.92
PTP4A2-215ENST00000533408 C5P01031 1676 aa27.05■■□□□ 1.92
PTP4A2-215ENST00000533408 A1BGP04217 495 aa27.05■■□□□ 1.92
PTP4A2-215ENST00000533408 INTS5Q6P9B9 1019 aaKnown RBP27.05■■□□□ 1.92
PTP4A2-215ENST00000533408 SOCS7O14512 581 aa27.04■■□□□ 1.92
PTP4A2-215ENST00000533408 GNPATO15228 680 aa27.04■■□□□ 1.92
PTP4A2-215ENST00000533408 CANXP27824 592 aaKnown RBP27.04■■□□□ 1.92
PTP4A2-215ENST00000533408 NECTIN2Q92692 538 aa27.04■■□□□ 1.92
PTP4A2-215ENST00000533408 TFCP2L1Q9NZI6 479 aa27.04■■□□□ 1.92
PTP4A2-215ENST00000533408 TJP1Q07157 1748 aa27.03■■□□□ 1.92
PTP4A2-215ENST00000533408 CHPF2Q9P2E5 772 aa27.03■■□□□ 1.92
PTP4A2-215ENST00000533408 LAMB4A4D0S4 1761 aa27.02■■□□□ 1.92
PTP4A2-215ENST00000533408 SLC4A2P04920 1241 aa27.02■■□□□ 1.92
PTP4A2-215ENST00000533408 SSFA2P28290 1259 aa27.02■■□□□ 1.92
PTP4A2-215ENST00000533408 AKT1S1Q96B36 256 aa27.02■■□□□ 1.92
PTP4A2-215ENST00000533408 SLC15A2Q16348 729 aa27.01■■□□□ 1.91
PTP4A2-215ENST00000533408 TRAPPC3LQ5T215 181 aa27.01■■□□□ 1.91
PTP4A2-215ENST00000533408 ZBTB1Q9Y2K1 713 aa27.01■■□□□ 1.91
PTP4A2-215ENST00000533408 MYL6BP14649 208 aa27■■□□□ 1.91
PTP4A2-215ENST00000533408 RARSP54136 660 aaKnown RBP27■■□□□ 1.91
PTP4A2-215ENST00000533408 SMC4Q9NTJ3 1288 aa27■■□□□ 1.91
PTP4A2-215ENST00000533408 C4BP0C0L5 1744 aa26.99■■□□□ 1.91
PTP4A2-215ENST00000533408 DDX58O95786 925 aaKnown RBP26.99■■□□□ 1.91
PTP4A2-215ENST00000533408 CENPBP07199 599 aaPredicted RBP26.99■■□□□ 1.91
PTP4A2-215ENST00000533408 EIF5P55010 431 aaKnown RBP26.99■■□□□ 1.91
PTP4A2-215ENST00000533408 BRPF1P55201 1214 aaPredicted RBP26.99■■□□□ 1.91
PTP4A2-215ENST00000533408 RCAN3Q9UKA8 241 aa26.99■■□□□ 1.91
PTP4A2-215ENST00000533408 COL5A3P25940 1745 aaPredicted RBP26.99■■□□□ 1.91
PTP4A2-215ENST00000533408 NBPF26B4DH59 902 aa26.98■■□□□ 1.91
PTP4A2-215ENST00000533408 PDIA6Q15084 440 aa26.98■■□□□ 1.91
PTP4A2-215ENST00000533408 NBPF10Q6P3W6 841 aaKnown RBP26.98■■□□□ 1.91
PTP4A2-215ENST00000533408 NBPF15Q8N660 670 aa26.98■■□□□ 1.91
PTP4A2-215ENST00000533408 ZNF330Q9Y3S2 320 aaPredicted RBP26.98■■□□□ 1.91
PTP4A2-215ENST00000533408 RREB1Q92766 1687 aa26.98■■□□□ 1.91
PTP4A2-215ENST00000533408 IPO8O15397 1037 aaKnown RBP26.97■■□□□ 1.91
PTP4A2-215ENST00000533408 RFC4P35249 363 aa26.97■■□□□ 1.91
PTP4A2-215ENST00000533408 KIF6Q6ZMV9 814 aa26.97■■□□□ 1.91
PTP4A2-215ENST00000533408 SSH1Q8WYL5 1049 aa26.97■■□□□ 1.91
PTP4A2-215ENST00000533408 TAF1LQ8IZX4 1826 aa26.97■■□□□ 1.91
PTP4A2-215ENST00000533408 KIF16BQ96L93 1317 aa26.95■■□□□ 1.91
PTP4A2-215ENST00000533408 RGL2O15211 777 aa26.95■■□□□ 1.9
PTP4A2-215ENST00000533408 ARXQ96QS3 562 aa26.95■■□□□ 1.9
PTP4A2-215ENST00000533408 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.94■■□□□ 1.9
PTP4A2-215ENST00000533408 ZPR1O75312 459 aa26.94■■□□□ 1.9
PTP4A2-215ENST00000533408 MRPL50Q8N5N7 158 aaKnown RBP26.94■■□□□ 1.9
PTP4A2-215ENST00000533408 PTPRCP08575 1304 aa26.93■■□□□ 1.9
PTP4A2-215ENST00000533408 TCERG1O14776 1098 aaKnown RBP26.93■■□□□ 1.9
PTP4A2-215ENST00000533408 ZNF827Q17R98 1081 aa26.93■■□□□ 1.9
PTP4A2-215ENST00000533408 COPS6Q7L5N1 327 aa26.93■■□□□ 1.9
PTP4A2-215ENST00000533408 DZIP3Q86Y13 1208 aaKnown RBP26.93■■□□□ 1.9
PTP4A2-215ENST00000533408 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.93■■□□□ 1.9
PTP4A2-215ENST00000533408 COL15A1P39059 1388 aa26.93■■□□□ 1.9
PTP4A2-215ENST00000533408 ERVV-1B6SEH8 477 aa26.92■■□□□ 1.9
PTP4A2-215ENST00000533408 PROSER3Q2NL68 480 aa26.92■■□□□ 1.9
PTP4A2-215ENST00000533408 XAGE3Q8WTP9 111 aa26.92■■□□□ 1.9
PTP4A2-215ENST00000533408 ZNF652Q9Y2D9 606 aa26.92■■□□□ 1.9
PTP4A2-215ENST00000533408 PHF14O94880 888 aa26.91■■□□□ 1.9
PTP4A2-215ENST00000533408 PIP4K2AP48426 406 aaPredicted RBP26.91■■□□□ 1.9
PTP4A2-215ENST00000533408 AIMP1Q12904 312 aaKnown RBP26.91■■□□□ 1.9
PTP4A2-215ENST00000533408 FLIIQ13045 1269 aa26.91■■□□□ 1.9
PTP4A2-215ENST00000533408 ANKRD13DQ6ZTN6 518 aa26.91■■□□□ 1.9
PTP4A2-215ENST00000533408 ARHGAP45Q92619 1136 aa26.91■■□□□ 1.9
PTP4A2-215ENST00000533408 ARHGEF1Q92888 912 aaKnown RBP26.91■■□□□ 1.9
PTP4A2-215ENST00000533408 NUP188Q5SRE5 1749 aa26.9■■□□□ 1.9
PTP4A2-215ENST00000533408 MSH5O43196 834 aa26.9■■□□□ 1.9
PTP4A2-215ENST00000533408 ANXA1P04083 346 aa26.9■■□□□ 1.9
PTP4A2-215ENST00000533408 LRP10Q7Z4F1 713 aa26.9■■□□□ 1.9
PTP4A2-215ENST00000533408 PLBD2Q8NHP8 589 aa26.9■■□□□ 1.9
PTP4A2-215ENST00000533408 NARFQ9UHQ1 456 aa26.9■■□□□ 1.9
PTP4A2-215ENST00000533408 MS4A1P11836 297 aa26.89■■□□□ 1.9
PTP4A2-215ENST00000533408 FKBP5Q13451 457 aaPredicted RBP26.89■■□□□ 1.9
PTP4A2-215ENST00000533408 PHAXQ9H814 394 aaKnown RBP26.89■■□□□ 1.9
PTP4A2-215ENST00000533408 ANO8Q9HCE9 1232 aaPredicted RBP26.89■■□□□ 1.9
PTP4A2-215ENST00000533408 CACNA1FO60840 1977 aa26.88■■□□□ 1.89
PTP4A2-215ENST00000533408 HSP90AB3PQ58FF7 597 aa26.88■■□□□ 1.89
PTP4A2-215ENST00000533408 CLEC4GQ6UXB4 293 aa26.88■■□□□ 1.89
PTP4A2-215ENST00000533408 RIC3Q7Z5B4 369 aa26.88■■□□□ 1.89
PTP4A2-215ENST00000533408 SLC16A10Q8TF71 515 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms