RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 ATRNO75882 1429 aa15.61■□□□□ 0.09
TGFBR3-211ENST00000533370 DBF4Q9UBU7 674 aaPredicted RBP15.61■□□□□ 0.09
TGFBR3-211ENST00000533370 COG6Q9Y2V7 657 aa15.61■□□□□ 0.09
TGFBR3-211ENST00000533370 SHANK3Q9BYB0 1731 aa15.6■□□□□ 0.09
TGFBR3-211ENST00000533370 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.6■□□□□ 0.09
TGFBR3-211ENST00000533370 PRIM1P49642 420 aaKnown RBP15.6■□□□□ 0.09
TGFBR3-211ENST00000533370 MVPQ14764 893 aaKnown RBP15.6■□□□□ 0.09
TGFBR3-211ENST00000533370 NECTIN2Q92692 538 aa15.6■□□□□ 0.09
TGFBR3-211ENST00000533370 TNNQ9UQP3 1299 aa15.6■□□□□ 0.09
TGFBR3-211ENST00000533370 ZNF772Q68DY9 489 aaPredicted RBP15.59■□□□□ 0.09
TGFBR3-211ENST00000533370 CHMP4BQ9H444 224 aaKnown RBP15.59■□□□□ 0.09
TGFBR3-211ENST00000533370 A0A0G2JS52 829 aa15.58■□□□□ 0.08
TGFBR3-211ENST00000533370 MYT1Q01538 1121 aa15.58■□□□□ 0.08
TGFBR3-211ENST00000533370 G2E3Q7L622 706 aa15.58■□□□□ 0.08
TGFBR3-211ENST00000533370 CCDC136Q96JN2 1154 aa15.58■□□□□ 0.08
TGFBR3-211ENST00000533370 TEX13AQ9BXU3 409 aaPredicted RBP15.58■□□□□ 0.08
TGFBR3-211ENST00000533370 ATG3Q9NT62 314 aa15.58■□□□□ 0.08
TGFBR3-211ENST00000533370 HYPKQ9NX55 129 aa15.58■□□□□ 0.08
TGFBR3-211ENST00000533370 DDX19BQ9UMR2 479 aa15.58■□□□□ 0.08
TGFBR3-211ENST00000533370 BCL9O00512 1426 aa15.58■□□□□ 0.08
TGFBR3-211ENST00000533370 WNK3Q9BYP7 1800 aa15.57■□□□□ 0.08
TGFBR3-211ENST00000533370 FLIIQ13045 1269 aa15.57■□□□□ 0.08
TGFBR3-211ENST00000533370 VSIG10Q8N0Z9 540 aa15.57■□□□□ 0.08
TGFBR3-211ENST00000533370 TMEM57Q8N5G2 664 aa15.57■□□□□ 0.08
TGFBR3-211ENST00000533370 DDX21Q9NR30 783 aaKnown RBP eCLIP15.57■□□□□ 0.08
TGFBR3-211ENST00000533370 CHPF2Q9P2E5 772 aa15.57■□□□□ 0.08
TGFBR3-211ENST00000533370 ASAP1Q9ULH1 1129 aa15.57■□□□□ 0.08
TGFBR3-211ENST00000533370 ABCC4O15439 1325 aa15.57■□□□□ 0.08
TGFBR3-211ENST00000533370 VIRMAQ69YN4 1812 aaKnown RBP15.57■□□□□ 0.08
TGFBR3-211ENST00000533370 PRAMEF22A3QJZ6 481 aa15.56■□□□□ 0.08
TGFBR3-211ENST00000533370 INTS3Q68E01 1043 aaKnown RBP15.56■□□□□ 0.08
TGFBR3-211ENST00000533370 IFNLR1Q8IU57 520 aaPredicted RBP15.56■□□□□ 0.08
TGFBR3-211ENST00000533370 SYTL4Q96C24 671 aaPredicted RBP15.56■□□□□ 0.08
TGFBR3-211ENST00000533370 PTCD1O75127 700 aaKnown RBP15.55■□□□□ 0.08
TGFBR3-211ENST00000533370 B4GALNT3Q6L9W6 998 aa15.55■□□□□ 0.08
TGFBR3-211ENST00000533370 ITPRIPQ8IWB1 547 aa15.55■□□□□ 0.08
TGFBR3-211ENST00000533370 SEPT12Q8IYM1 358 aa15.55■□□□□ 0.08
TGFBR3-211ENST00000533370 USP16Q9Y5T5 823 aa15.55■□□□□ 0.08
TGFBR3-211ENST00000533370 ERBB4Q15303 1308 aa15.54■□□□□ 0.08
TGFBR3-211ENST00000533370 FKBP5Q13451 457 aaPredicted RBP15.54■□□□□ 0.08
TGFBR3-211ENST00000533370 PDIA6Q15084 440 aa15.54■□□□□ 0.08
TGFBR3-211ENST00000533370 ZBTB7BO15156 539 aaPredicted RBP15.53■□□□□ 0.08
TGFBR3-211ENST00000533370 CCT4P50991 539 aaKnown RBP15.53■□□□□ 0.08
TGFBR3-211ENST00000533370 SMARCC1Q92922 1105 aaPredicted RBP15.53■□□□□ 0.08
TGFBR3-211ENST00000533370 ACSBG1Q96GR2 724 aa15.53■□□□□ 0.08
TGFBR3-211ENST00000533370 PHAXQ9H814 394 aaKnown RBP15.53■□□□□ 0.08
TGFBR3-211ENST00000533370 GLI3P10071 1580 aa15.53■□□□□ 0.08
TGFBR3-211ENST00000533370 SPDYE2BA6NHP3 402 aa15.52■□□□□ 0.08
TGFBR3-211ENST00000533370 STARD3NLO95772 234 aa15.52■□□□□ 0.08
TGFBR3-211ENST00000533370 SPDYE6P0CI01 402 aa15.52■□□□□ 0.08
TGFBR3-211ENST00000533370 RBM6P78332 1123 aaKnown RBP15.52■□□□□ 0.08
TGFBR3-211ENST00000533370 SPDYE2Q495Y8 402 aa15.52■□□□□ 0.08
TGFBR3-211ENST00000533370 ZBTB40Q9NUA8 1239 aa15.52■□□□□ 0.08
TGFBR3-211ENST00000533370 DDX58O95786 925 aaKnown RBP15.51■□□□□ 0.07
TGFBR3-211ENST00000533370 RBM42Q9BTD8 480 aaKnown RBP15.51■□□□□ 0.07
TGFBR3-211ENST00000533370 KCPQ6ZWJ8 1503 aa15.51■□□□□ 0.07
TGFBR3-211ENST00000533370 TOGARAM1Q9Y4F4 1720 aa15.51■□□□□ 0.07
TGFBR3-211ENST00000533370 RGS12O14924 1447 aa15.51■□□□□ 0.07
TGFBR3-211ENST00000533370 THSD7AQ9UPZ6 1657 aa15.51■□□□□ 0.07
TGFBR3-211ENST00000533370 PROSER3Q2NL68 480 aa15.5■□□□□ 0.07
TGFBR3-211ENST00000533370 KSR2Q6VAB6 950 aa15.5■□□□□ 0.07
TGFBR3-211ENST00000533370 PI4KAP2A4QPH2 592 aa15.49■□□□□ 0.07
TGFBR3-211ENST00000533370 F6X3S4 739 aa15.49■□□□□ 0.07
TGFBR3-211ENST00000533370 KCNQ2O43526 872 aa15.49■□□□□ 0.07
TGFBR3-211ENST00000533370 ANXA1P04083 346 aa15.49■□□□□ 0.07
TGFBR3-211ENST00000533370 SLC4A10Q6U841 1118 aa15.49■□□□□ 0.07
TGFBR3-211ENST00000533370 PI4KAP1Q8N8J0 262 aa15.49■□□□□ 0.07
TGFBR3-211ENST00000533370 PAPPAQ13219 1627 aa15.49■□□□□ 0.07
TGFBR3-211ENST00000533370 CACNA1FO60840 1977 aa15.48■□□□□ 0.07
TGFBR3-211ENST00000533370 MYL6BP14649 208 aa15.48■□□□□ 0.07
TGFBR3-211ENST00000533370 LRP10Q7Z4F1 713 aa15.48■□□□□ 0.07
TGFBR3-211ENST00000533370 DNAJC10Q8IXB1 793 aa15.48■□□□□ 0.07
TGFBR3-211ENST00000533370 DNAAF4Q8WXU2 420 aa15.48■□□□□ 0.07
TGFBR3-211ENST00000533370 SSUH2Q9Y2M2 353 aa15.48■□□□□ 0.07
TGFBR3-211ENST00000533370 UBR2Q8IWV8 1755 aa15.47■□□□□ 0.07
TGFBR3-211ENST00000533370 NBPF26B4DH59 902 aa15.47■□□□□ 0.07
TGFBR3-211ENST00000533370 A1BGP04217 495 aa15.47■□□□□ 0.07
TGFBR3-211ENST00000533370 RXRBP28702 533 aa15.47■□□□□ 0.07
TGFBR3-211ENST00000533370 NBPF14Q5TI25 921 aa15.47■□□□□ 0.07
TGFBR3-211ENST00000533370 NBPF10Q6P3W6 841 aaKnown RBP15.47■□□□□ 0.07
TGFBR3-211ENST00000533370 COPS6Q7L5N1 327 aa15.47■□□□□ 0.07
TGFBR3-211ENST00000533370 KRT27Q7Z3Y8 459 aa15.47■□□□□ 0.07
TGFBR3-211ENST00000533370 NBPF15Q8N660 670 aa15.47■□□□□ 0.07
TGFBR3-211ENST00000533370 XAGE3Q8WTP9 111 aa15.47■□□□□ 0.07
TGFBR3-211ENST00000533370 SLC4A9Q96Q91 983 aa15.47■□□□□ 0.07
TGFBR3-211ENST00000533370 RWDD1Q9H446 243 aaPredicted RBP15.47■□□□□ 0.07
TGFBR3-211ENST00000533370 PCDHB15Q9Y5E8 787 aa15.47■□□□□ 0.07
TGFBR3-211ENST00000533370 ITGB4P16144 1822 aa15.47■□□□□ 0.07
TGFBR3-211ENST00000533370 CYP19A1P11511 503 aaPredicted RBP15.46■□□□□ 0.07
TGFBR3-211ENST00000533370 AIMP1Q12904 312 aaKnown RBP15.46■□□□□ 0.07
TGFBR3-211ENST00000533370 FAM196AQ6ZSG2 479 aa15.46■□□□□ 0.07
TGFBR3-211ENST00000533370 ANKRD13DQ6ZTN6 518 aa15.46■□□□□ 0.07
TGFBR3-211ENST00000533370 SRCIN1Q9C0H9 1055 aa15.46■□□□□ 0.07
TGFBR3-211ENST00000533370 LOC102724428A0A0B4J2F2 783 aa15.45■□□□□ 0.06
TGFBR3-211ENST00000533370 SIK1P57059 783 aa15.45■□□□□ 0.06
TGFBR3-211ENST00000533370 BEND3Q5T5X7 828 aa15.45■□□□□ 0.06
TGFBR3-211ENST00000533370 CENPQQ7L2Z9 268 aaPredicted RBP15.45■□□□□ 0.06
TGFBR3-211ENST00000533370 RIC3Q7Z5B4 369 aa15.45■□□□□ 0.06
TGFBR3-211ENST00000533370 MAP3K2Q9Y2U5 619 aa15.45■□□□□ 0.06
TGFBR3-211ENST00000533370 ALDH1L1O75891 902 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms