RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
HIF3A-215ENST00000533145 KIF16BQ96L93 1317 aa18.04■□□□□ 0.48
HIF3A-215ENST00000533145 BCL2L13Q9BXK5 485 aa18.04■□□□□ 0.48
HIF3A-215ENST00000533145 DDX21Q9NR30 783 aaKnown RBP eCLIP18.04■□□□□ 0.48
HIF3A-215ENST00000533145 COL5A3P25940 1745 aaPredicted RBP18.03■□□□□ 0.48
HIF3A-215ENST00000533145 PLSCR1O15162 318 aa18.03■□□□□ 0.48
HIF3A-215ENST00000533145 IPO8O15397 1037 aaKnown RBP18.03■□□□□ 0.48
HIF3A-215ENST00000533145 STARD3NLO95772 234 aa18.03■□□□□ 0.48
HIF3A-215ENST00000533145 PDIA6Q15084 440 aa18.03■□□□□ 0.48
HIF3A-215ENST00000533145 DNAJC10Q8IXB1 793 aa18.03■□□□□ 0.48
HIF3A-215ENST00000533145 TCERG1O14776 1098 aaKnown RBP18.02■□□□□ 0.48
HIF3A-215ENST00000533145 CYP19A1P11511 503 aaPredicted RBP18.02■□□□□ 0.48
HIF3A-215ENST00000533145 ATP6V1AP38606 617 aa18.02■□□□□ 0.48
HIF3A-215ENST00000533145 NECTIN2Q92692 538 aa18.02■□□□□ 0.48
HIF3A-215ENST00000533145 TNS1Q9HBL0 1735 aaKnown RBP18.02■□□□□ 0.48
HIF3A-215ENST00000533145 HYPKQ9NX55 129 aa18.02■□□□□ 0.48
HIF3A-215ENST00000533145 CHPF2Q9P2E5 772 aa18.02■□□□□ 0.48
HIF3A-215ENST00000533145 NOB1Q9ULX3 412 aaKnown RBP18.02■□□□□ 0.48
HIF3A-215ENST00000533145 TAF1LQ8IZX4 1826 aa18.02■□□□□ 0.47
HIF3A-215ENST00000533145 PTPRCP08575 1304 aa18.01■□□□□ 0.47
HIF3A-215ENST00000533145 HMGB2P26583 209 aaKnown RBP18.01■□□□□ 0.47
HIF3A-215ENST00000533145 ZKSCAN2Q63HK3 967 aa18.01■□□□□ 0.47
HIF3A-215ENST00000533145 LRP10Q7Z4F1 713 aa18.01■□□□□ 0.47
HIF3A-215ENST00000533145 RREB1Q92766 1687 aa18.01■□□□□ 0.47
HIF3A-215ENST00000533145 RGPD3A6NKT7 1758 aaPredicted RBP18.01■□□□□ 0.47
HIF3A-215ENST00000533145 RGPD4Q7Z3J3 1758 aa18.01■□□□□ 0.47
HIF3A-215ENST00000533145 MS4A1P11836 297 aa18■□□□□ 0.47
HIF3A-215ENST00000533145 ITPK1Q13572 414 aa18■□□□□ 0.47
HIF3A-215ENST00000533145 PDE3AQ14432 1141 aa18■□□□□ 0.47
HIF3A-215ENST00000533145 ATF7IPQ6VMQ6 1270 aa18■□□□□ 0.47
HIF3A-215ENST00000533145 MYH14Q7Z406 1995 aaKnown RBP18■□□□□ 0.47
HIF3A-215ENST00000533145 PLIN1O60240 522 aa17.99■□□□□ 0.47
HIF3A-215ENST00000533145 A1BGP04217 495 aa17.99■□□□□ 0.47
HIF3A-215ENST00000533145 G2E3Q7L622 706 aa17.99■□□□□ 0.47
HIF3A-215ENST00000533145 FRAT1Q92837 279 aaPredicted RBP17.99■□□□□ 0.47
HIF3A-215ENST00000533145 NBPF26B4DH59 902 aa17.98■□□□□ 0.47
HIF3A-215ENST00000533145 FLIIQ13045 1269 aa17.98■□□□□ 0.47
HIF3A-215ENST00000533145 PROSER3Q2NL68 480 aa17.98■□□□□ 0.47
HIF3A-215ENST00000533145 SLC27A3Q5K4L6 730 aa17.98■□□□□ 0.47
HIF3A-215ENST00000533145 RC3H1Q5TC82 1133 aaKnown RBP17.98■□□□□ 0.47
HIF3A-215ENST00000533145 NBPF14Q5TI25 921 aa17.98■□□□□ 0.47
HIF3A-215ENST00000533145 NBPF10Q6P3W6 841 aaKnown RBP17.98■□□□□ 0.47
HIF3A-215ENST00000533145 NBPF15Q8N660 670 aa17.98■□□□□ 0.47
HIF3A-215ENST00000533145 API5Q9BZZ5 524 aaKnown RBP17.98■□□□□ 0.47
HIF3A-215ENST00000533145 TRIM27P14373 513 aa17.97■□□□□ 0.47
HIF3A-215ENST00000533145 PHAXQ9H814 394 aaKnown RBP17.97■□□□□ 0.47
HIF3A-215ENST00000533145 CCNL1Q9UK58 526 aaPredicted RBP17.97■□□□□ 0.47
HIF3A-215ENST00000533145 APBA3O96018 575 aa17.96■□□□□ 0.47
HIF3A-215ENST00000533145 CANXP27824 592 aaKnown RBP17.96■□□□□ 0.47
HIF3A-215ENST00000533145 CNTNAP4Q9C0A0 1308 aa17.96■□□□□ 0.46
HIF3A-215ENST00000533145 ANXA1P04083 346 aa17.95■□□□□ 0.46
HIF3A-215ENST00000533145 IL6STP40189 918 aaPredicted RBP17.95■□□□□ 0.46
HIF3A-215ENST00000533145 CRKLP46109 303 aaKnown RBP17.95■□□□□ 0.46
HIF3A-215ENST00000533145 INTS5Q6P9B9 1019 aaKnown RBP17.95■□□□□ 0.46
HIF3A-215ENST00000533145 DZIP1LQ8IYY4 767 aaKnown RBP17.95■□□□□ 0.46
HIF3A-215ENST00000533145 CCDC87Q9NVE4 849 aa17.95■□□□□ 0.46
HIF3A-215ENST00000533145 MYL6BP14649 208 aa17.94■□□□□ 0.46
HIF3A-215ENST00000533145 CCDC125Q86Z20 511 aa17.94■□□□□ 0.46
HIF3A-215ENST00000533145 PROM2Q8N271 834 aa17.94■□□□□ 0.46
HIF3A-215ENST00000533145 LINC00116Q8NCU8 138 aa17.94■□□□□ 0.46
HIF3A-215ENST00000533145 LRRC4BQ9NT99 713 aa17.94■□□□□ 0.46
HIF3A-215ENST00000533145 ABCC4O15439 1325 aa17.94■□□□□ 0.46
HIF3A-215ENST00000533145 FKBP5Q13451 457 aaPredicted RBP17.93■□□□□ 0.46
HIF3A-215ENST00000533145 TXNRD1Q16881 649 aa17.93■□□□□ 0.46
HIF3A-215ENST00000533145 C20orf194Q5TEA3 1177 aa17.93■□□□□ 0.46
HIF3A-215ENST00000533145 COPS6Q7L5N1 327 aa17.93■□□□□ 0.46
HIF3A-215ENST00000533145 ZBTB1Q9Y2K1 713 aa17.93■□□□□ 0.46
HIF3A-215ENST00000533145 C4BP0C0L5 1744 aa17.92■□□□□ 0.46
HIF3A-215ENST00000533145 N4BP2Q86UW6 1770 aaPredicted RBP17.92■□□□□ 0.46
HIF3A-215ENST00000533145 DDX58O95786 925 aaKnown RBP17.92■□□□□ 0.46
HIF3A-215ENST00000533145 NEFLP07196 543 aa17.92■□□□□ 0.46
HIF3A-215ENST00000533145 EIF5P55010 431 aaKnown RBP17.92■□□□□ 0.46
HIF3A-215ENST00000533145 KSR2Q6VAB6 950 aa17.92■□□□□ 0.46
HIF3A-215ENST00000533145 XAGE3Q8WTP9 111 aa17.92■□□□□ 0.46
HIF3A-215ENST00000533145 TNNQ9UQP3 1299 aa17.92■□□□□ 0.46
HIF3A-215ENST00000533145 RLBP1P12271 317 aa17.91■□□□□ 0.46
HIF3A-215ENST00000533145 PIP4K2AP48426 406 aaPredicted RBP17.91■□□□□ 0.46
HIF3A-215ENST00000533145 ERICH6BQ5W0A0 696 aa17.91■□□□□ 0.46
HIF3A-215ENST00000533145 INTS3Q68E01 1043 aaKnown RBP17.91■□□□□ 0.46
HIF3A-215ENST00000533145 ANKRD13DQ6ZTN6 518 aa17.91■□□□□ 0.46
HIF3A-215ENST00000533145 EP400Q96L91 3159 aa17.91■□□□□ 0.46
HIF3A-215ENST00000533145 PXDNLA1KZ92 1463 aa17.9■□□□□ 0.46
HIF3A-215ENST00000533145 PI4KAP2A4QPH2 592 aa17.9■□□□□ 0.46
HIF3A-215ENST00000533145 RPS6KA4O75676 772 aa17.9■□□□□ 0.46
HIF3A-215ENST00000533145 KCNQ4P56696 695 aa17.9■□□□□ 0.46
HIF3A-215ENST00000533145 FTSJ3Q8IY81 847 aaKnown RBP17.9■□□□□ 0.46
HIF3A-215ENST00000533145 PI4KAP1Q8N8J0 262 aa17.9■□□□□ 0.46
HIF3A-215ENST00000533145 PLBD2Q8NHP8 589 aa17.9■□□□□ 0.46
HIF3A-215ENST00000533145 PANK1Q8TE04 598 aa17.9■□□□□ 0.46
HIF3A-215ENST00000533145 CLUAP1Q96AJ1 413 aa17.9■□□□□ 0.46
HIF3A-215ENST00000533145 CAMKK2Q96RR4 588 aa17.9■□□□□ 0.46
HIF3A-215ENST00000533145 ADCY9O60503 1353 aa17.9■□□□□ 0.46
HIF3A-215ENST00000533145 AIMP1Q12904 312 aaKnown RBP17.89■□□□□ 0.45
HIF3A-215ENST00000533145 SF3B2Q13435 895 aaKnown RBP17.89■□□□□ 0.45
HIF3A-215ENST00000533145 DNAAF4Q8WXU2 420 aa17.89■□□□□ 0.45
HIF3A-215ENST00000533145 NUP188Q5SRE5 1749 aa17.89■□□□□ 0.45
HIF3A-215ENST00000533145 ARFGEF2Q9Y6D5 1785 aa17.89■□□□□ 0.45
HIF3A-215ENST00000533145 TTLL7Q6ZT98 887 aa17.88■□□□□ 0.45
HIF3A-215ENST00000533145 TMEM57Q8N5G2 664 aa17.88■□□□□ 0.45
HIF3A-215ENST00000533145 IBTKQ9P2D0 1353 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms