RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 DCTN1Q14203 1278 aa17.06■□□□□ 0.32
TRAPPC4-212ENST00000533058 MIER1Q8N108 512 aa17.06■□□□□ 0.32
TRAPPC4-212ENST00000533058 NLGN2Q8NFZ4 835 aa17.06■□□□□ 0.32
TRAPPC4-212ENST00000533058 PNISRQ8TF01 805 aaKnown RBP17.06■□□□□ 0.32
TRAPPC4-212ENST00000533058 ZBTB1Q9Y2K1 713 aa17.06■□□□□ 0.32
TRAPPC4-212ENST00000533058 NARFQ9UHQ1 456 aa17.05■□□□□ 0.32
TRAPPC4-212ENST00000533058 KCNQ3O43525 872 aa17.04■□□□□ 0.32
TRAPPC4-212ENST00000533058 EIF5P55010 431 aaKnown RBP17.04■□□□□ 0.32
TRAPPC4-212ENST00000533058 ADAMTS8Q9UP79 889 aa17.04■□□□□ 0.32
TRAPPC4-212ENST00000533058 COL15A1P39059 1388 aa17.03■□□□□ 0.32
TRAPPC4-212ENST00000533058 A0A087WZG4 1122 aa17.03■□□□□ 0.32
TRAPPC4-212ENST00000533058 ZPR1O75312 459 aa17.03■□□□□ 0.32
TRAPPC4-212ENST00000533058 SNRPA1P09661 255 aaKnown RBP17.03■□□□□ 0.32
TRAPPC4-212ENST00000533058 IL6STP40189 918 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC4-212ENST00000533058 SRP68Q9UHB9 627 aaKnown RBP17.03■□□□□ 0.32
TRAPPC4-212ENST00000533058 CCER2I3L3R5 266 aa17.02■□□□□ 0.32
TRAPPC4-212ENST00000533058 TM4SF1P30408 202 aa17.02■□□□□ 0.32
TRAPPC4-212ENST00000533058 FKBP8Q14318 412 aa17.02■□□□□ 0.32
TRAPPC4-212ENST00000533058 GPR162Q16538 588 aa17.02■□□□□ 0.32
TRAPPC4-212ENST00000533058 CCDC146Q8IYE0 955 aa17.02■□□□□ 0.32
TRAPPC4-212ENST00000533058 FAM9BQ8IZU0 186 aa17.02■□□□□ 0.32
TRAPPC4-212ENST00000533058 CANXP27824 592 aaKnown RBP17.01■□□□□ 0.31
TRAPPC4-212ENST00000533058 TMPOP42166 694 aaKnown RBP17.01■□□□□ 0.31
TRAPPC4-212ENST00000533058 LMOD3Q0VAK6 560 aa17.01■□□□□ 0.31
TRAPPC4-212ENST00000533058 USPL1Q5W0Q7 1092 aa17.01■□□□□ 0.31
TRAPPC4-212ENST00000533058 RUNDC1Q96C34 613 aa17.01■□□□□ 0.31
TRAPPC4-212ENST00000533058 USP16Q9Y5T5 823 aa17.01■□□□□ 0.31
TRAPPC4-212ENST00000533058 PARP3Q9Y6F1 533 aa17.01■□□□□ 0.31
TRAPPC4-212ENST00000533058 C4AP0C0L4 1744 aa17.01■□□□□ 0.31
TRAPPC4-212ENST00000533058 GRIN3BO60391 1043 aa17■□□□□ 0.31
TRAPPC4-212ENST00000533058 RIPK4P57078 832 aa17■□□□□ 0.31
TRAPPC4-212ENST00000533058 TGFB2P61812 414 aa17■□□□□ 0.31
TRAPPC4-212ENST00000533058 BABAM1Q9NWV8 329 aa17■□□□□ 0.31
TRAPPC4-212ENST00000533058 YY1P25490 414 aa16.99■□□□□ 0.31
TRAPPC4-212ENST00000533058 BCL2L12Q9HB09 334 aa16.99■□□□□ 0.31
TRAPPC4-212ENST00000533058 C10orf71Q711Q0 1435 aa16.98■□□□□ 0.31
TRAPPC4-212ENST00000533058 A1BGP04217 495 aa16.98■□□□□ 0.31
TRAPPC4-212ENST00000533058 POLRMTO00411 1230 aaKnown RBP16.97■□□□□ 0.31
TRAPPC4-212ENST00000533058 YBX3P16989 372 aaKnown RBP eCLIP16.97■□□□□ 0.31
TRAPPC4-212ENST00000533058 DDR1Q08345 913 aa16.97■□□□□ 0.31
TRAPPC4-212ENST00000533058 MIS18AQ9NYP9 233 aa16.97■□□□□ 0.31
TRAPPC4-212ENST00000533058 DLG5Q8TDM6 1919 aa16.96■□□□□ 0.31
TRAPPC4-212ENST00000533058 RGL2O15211 777 aa16.96■□□□□ 0.31
TRAPPC4-212ENST00000533058 EIF4A1P60842 406 aaKnown RBP16.96■□□□□ 0.31
TRAPPC4-212ENST00000533058 NFIXQ14938 502 aa16.96■□□□□ 0.31
TRAPPC4-212ENST00000533058 NPM2Q86SE8 214 aaKnown RBP16.96■□□□□ 0.31
TRAPPC4-212ENST00000533058 THUMPD2Q9BTF0 503 aaKnown RBP16.96■□□□□ 0.31
TRAPPC4-212ENST00000533058 PRAMEF22A3QJZ6 481 aa16.95■□□□□ 0.3
TRAPPC4-212ENST00000533058 GIGYF1O75420 1035 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC4-212ENST00000533058 NEUROD2Q15784 382 aa16.95■□□□□ 0.3
TRAPPC4-212ENST00000533058 KIF13BQ9NQT8 1826 aa16.95■□□□□ 0.3
TRAPPC4-212ENST00000533058 PXDNLA1KZ92 1463 aa16.94■□□□□ 0.3
TRAPPC4-212ENST00000533058 PELP1Q8IZL8 1130 aaKnown RBP16.94■□□□□ 0.3
TRAPPC4-212ENST00000533058 RRP7AQ9Y3A4 280 aaKnown RBP16.94■□□□□ 0.3
TRAPPC4-212ENST00000533058 CLEC4GQ6UXB4 293 aa16.93■□□□□ 0.3
TRAPPC4-212ENST00000533058 TRIM35Q9UPQ4 493 aa16.93■□□□□ 0.3
TRAPPC4-212ENST00000533058 TBC1D2BQ9UPU7 963 aa16.93■□□□□ 0.3
TRAPPC4-212ENST00000533058 UTRNP46939 3433 aa16.93■□□□□ 0.3
TRAPPC4-212ENST00000533058 NBPF26B4DH59 902 aa16.92■□□□□ 0.3
TRAPPC4-212ENST00000533058 CAMTA2O94983 1202 aa16.92■□□□□ 0.3
TRAPPC4-212ENST00000533058 NBPF10Q6P3W6 841 aaKnown RBP16.92■□□□□ 0.3
TRAPPC4-212ENST00000533058 DZIP3Q86Y13 1208 aaKnown RBP16.92■□□□□ 0.3
TRAPPC4-212ENST00000533058 NBPF15Q8N660 670 aa16.92■□□□□ 0.3
TRAPPC4-212ENST00000533058 TSPYL4Q9UJ04 414 aa16.92■□□□□ 0.3
TRAPPC4-212ENST00000533058 SENP3-EIF4A1A0A087X0R7 540 aa16.91■□□□□ 0.3
TRAPPC4-212ENST00000533058 CHL1O00533 1208 aa16.91■□□□□ 0.3
TRAPPC4-212ENST00000533058 APAF1O14727 1248 aa16.91■□□□□ 0.3
TRAPPC4-212ENST00000533058 SERPINB2P05120 415 aa16.91■□□□□ 0.3
TRAPPC4-212ENST00000533058 ZNF330Q9Y3S2 320 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC4-212ENST00000533058 KDM3BQ7LBC6 1761 aa16.91■□□□□ 0.3
TRAPPC4-212ENST00000533058 A0A0G2JLW4 131 aa16.9■□□□□ 0.3
TRAPPC4-212ENST00000533058 DPEP1P16444 411 aa16.9■□□□□ 0.3
TRAPPC4-212ENST00000533058 KCNA3P22001 575 aa16.9■□□□□ 0.3
TRAPPC4-212ENST00000533058 ERBB4Q15303 1308 aa16.9■□□□□ 0.3
TRAPPC4-212ENST00000533058 TBC1D9BQ66K14 1250 aa16.89■□□□□ 0.29
TRAPPC4-212ENST00000533058 CHD4Q14839 1912 aa16.88■□□□□ 0.29
TRAPPC4-212ENST00000533058 KIAA1551Q9HCM1 1747 aa16.88■□□□□ 0.29
TRAPPC4-212ENST00000533058 PIP4K2AP48426 406 aaPredicted RBP16.88■□□□□ 0.29
TRAPPC4-212ENST00000533058 PIM2Q9P1W9 311 aa16.88■□□□□ 0.29
TRAPPC4-212ENST00000533058 ZNF652Q9Y2D9 606 aa16.88■□□□□ 0.29
TRAPPC4-212ENST00000533058 CARMIL3Q8ND23 1372 aa16.88■□□□□ 0.29
TRAPPC4-212ENST00000533058 NRXN2Q9P2S2 1712 aa16.87■□□□□ 0.29
TRAPPC4-212ENST00000533058 GOLGB1Q14789 3259 aaKnown RBP16.87■□□□□ 0.29
TRAPPC4-212ENST00000533058 SETDB2Q96T68 719 aa16.87■□□□□ 0.29
TRAPPC4-212ENST00000533058 PDZRN3Q9UPQ7 1066 aa16.87■□□□□ 0.29
TRAPPC4-212ENST00000533058 SALL2Q9Y467 1007 aaPredicted RBP16.87■□□□□ 0.29
TRAPPC4-212ENST00000533058 SCN7AQ01118 1682 aa16.87■□□□□ 0.29
TRAPPC4-212ENST00000533058 ERVV-1B6SEH8 477 aa16.86■□□□□ 0.29
TRAPPC4-212ENST00000533058 BICDL1Q6ZP65 573 aa16.86■□□□□ 0.29
TRAPPC4-212ENST00000533058 CFAP44Q96MT7 982 aa16.86■□□□□ 0.29
TRAPPC4-212ENST00000533058 LAMB4A4D0S4 1761 aa16.85■□□□□ 0.29
TRAPPC4-212ENST00000533058 CALD1Q05682 793 aaKnown RBP16.85■□□□□ 0.29
TRAPPC4-212ENST00000533058 NCBP3Q53F19 620 aaKnown RBP16.85■□□□□ 0.29
TRAPPC4-212ENST00000533058 ZNF784Q8NCA9 323 aaPredicted RBP16.85■□□□□ 0.29
TRAPPC4-212ENST00000533058 BRIP1Q9BX63 1249 aa16.85■□□□□ 0.29
TRAPPC4-212ENST00000533058 BCS1LQ9Y276 419 aa16.85■□□□□ 0.29
TRAPPC4-212ENST00000533058 HOXB7P09629 217 aa16.84■□□□□ 0.29
TRAPPC4-212ENST00000533058 ZNF853P0CG23 659 aa16.84■□□□□ 0.29
TRAPPC4-212ENST00000533058 DALRD3Q5D0E6 543 aaKnown RBP16.84■□□□□ 0.29
TRAPPC4-212ENST00000533058 PRR5LQ6MZQ0 368 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms