RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 STK24Q9Y6E0 443 aa11.52□□□□□ -0.57
NUP98-219ENST00000532475 SMG6Q86US8 1419 aaKnown RBP11.52□□□□□ -0.57
NUP98-219ENST00000532475 N4BP2Q86UW6 1770 aaPredicted RBP11.51□□□□□ -0.57
NUP98-219ENST00000532475 MAP2P11137 1827 aaKnown RBP11.51□□□□□ -0.57
NUP98-219ENST00000532475 KCPQ6ZWJ8 1503 aa11.51□□□□□ -0.57
NUP98-219ENST00000532475 PHKG2P15735 406 aa11.51□□□□□ -0.57
NUP98-219ENST00000532475 CHRNA5P30532 468 aa11.51□□□□□ -0.57
NUP98-219ENST00000532475 RFC4P35249 363 aa11.51□□□□□ -0.57
NUP98-219ENST00000532475 DCAF5Q96JK2 942 aa11.51□□□□□ -0.57
NUP98-219ENST00000532475 PARP3Q9Y6F1 533 aa11.51□□□□□ -0.57
NUP98-219ENST00000532475 FLT4P35916 1363 aa11.51□□□□□ -0.57
NUP98-219ENST00000532475 ITGB4P16144 1822 aa11.51□□□□□ -0.57
NUP98-219ENST00000532475 C10orf71Q711Q0 1435 aa11.51□□□□□ -0.57
NUP98-219ENST00000532475 RPS6KA4O75676 772 aa11.5□□□□□ -0.57
NUP98-219ENST00000532475 HSPA1AP0DMV8 641 aaKnown RBP11.5□□□□□ -0.57
NUP98-219ENST00000532475 HSPA1BP0DMV9 641 aaKnown RBP11.5□□□□□ -0.57
NUP98-219ENST00000532475 DALRD3Q5D0E6 543 aaKnown RBP11.5□□□□□ -0.57
NUP98-219ENST00000532475 IFNL2Q8IZJ0 200 aa11.5□□□□□ -0.57
NUP98-219ENST00000532475 CARD14Q9BXL6 1004 aa11.5□□□□□ -0.57
NUP98-219ENST00000532475 SRP68Q9UHB9 627 aaKnown RBP11.5□□□□□ -0.57
NUP98-219ENST00000532475 KDM2BQ8NHM5 1336 aa11.5□□□□□ -0.57
NUP98-219ENST00000532475 WDR90Q96KV7 1748 aa11.49□□□□□ -0.57
NUP98-219ENST00000532475 KIAA1551Q9HCM1 1747 aa11.49□□□□□ -0.57
NUP98-219ENST00000532475 RC3H1Q5TC82 1133 aaKnown RBP11.49□□□□□ -0.57
NUP98-219ENST00000532475 SMC1BQ8NDV3 1235 aa11.49□□□□□ -0.57
NUP98-219ENST00000532475 ARID3AQ99856 593 aa11.49□□□□□ -0.57
NUP98-219ENST00000532475 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.49□□□□□ -0.572e-6■■□□□ 14.5
NUP98-219ENST00000532475 CACNB1Q02641 598 aaPredicted RBP11.48□□□□□ -0.57
NUP98-219ENST00000532475 DDR1Q08345 913 aa11.48□□□□□ -0.57
NUP98-219ENST00000532475 DCAF8Q5TAQ9 597 aa11.47□□□□□ -0.57
NUP98-219ENST00000532475 KIF13BQ9NQT8 1826 aa11.46□□□□□ -0.57
NUP98-219ENST00000532475 KDRP35968 1356 aa11.46□□□□□ -0.57
NUP98-219ENST00000532475 TONSLQ96HA7 1378 aa11.46□□□□□ -0.57
NUP98-219ENST00000532475 WASHC2AQ641Q2 1341 aa11.46□□□□□ -0.57
NUP98-219ENST00000532475 PTCD1O75127 700 aaKnown RBP11.46□□□□□ -0.57
NUP98-219ENST00000532475 RASSF7Q02833 373 aa11.46□□□□□ -0.57
NUP98-219ENST00000532475 KIF24Q5T7B8 1368 aa11.45□□□□□ -0.58
NUP98-219ENST00000532475 PLEKHG2Q9H7P9 1386 aa11.45□□□□□ -0.58
NUP98-219ENST00000532475 CNTNAP4Q9C0A0 1308 aa11.45□□□□□ -0.58
NUP98-219ENST00000532475 POTECB2RU33 542 aa11.45□□□□□ -0.58
NUP98-219ENST00000532475 VEGFAP15692 232 aaPredicted RBP11.45□□□□□ -0.58
NUP98-219ENST00000532475 POLKQ9UBT6 870 aa11.45□□□□□ -0.58
NUP98-219ENST00000532475 NCAPD2Q15021 1401 aa11.44□□□□□ -0.58
NUP98-219ENST00000532475 ERVV-2B6SEH9 535 aa11.44□□□□□ -0.58
NUP98-219ENST00000532475 POLRMTO00411 1230 aaKnown RBP11.44□□□□□ -0.58
NUP98-219ENST00000532475 TM4SF1P30408 202 aa11.44□□□□□ -0.58
NUP98-219ENST00000532475 CRKLP46109 303 aaKnown RBP11.44□□□□□ -0.58
NUP98-219ENST00000532475 GLTPD2A6NH11 291 aa11.43□□□□□ -0.58
NUP98-219ENST00000532475 INTS5Q6P9B9 1019 aaKnown RBP11.43□□□□□ -0.58
NUP98-219ENST00000532475 USP42Q9H9J4 1324 aaKnown RBP11.42□□□□□ -0.58
NUP98-219ENST00000532475 MYH14Q7Z406 1995 aaKnown RBP11.42□□□□□ -0.58
NUP98-219ENST00000532475 ABCB7O75027 752 aa11.42□□□□□ -0.58
NUP98-219ENST00000532475 CABP4P57796 275 aa11.42□□□□□ -0.58
NUP98-219ENST00000532475 EIF4A2Q14240 407 aaKnown RBP11.42□□□□□ -0.58
NUP98-219ENST00000532475 NFATC2IPQ8NCF5 419 aa11.42□□□□□ -0.58
NUP98-219ENST00000532475 C4AP0C0L4 1744 aa11.42□□□□□ -0.58
NUP98-219ENST00000532475 PKD1L3Q7Z443 1732 aa11.41□□□□□ -0.58
NUP98-219ENST00000532475 BRCA1P38398 1863 aaKnown RBP11.41□□□□□ -0.58
NUP98-219ENST00000532475 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.41□□□□□ -0.58
NUP98-219ENST00000532475 LMNB1P20700 586 aa11.41□□□□□ -0.58
NUP98-219ENST00000532475 TNNT2P45379 298 aaPredicted RBP11.41□□□□□ -0.58
NUP98-219ENST00000532475 USPL1Q5W0Q7 1092 aa11.41□□□□□ -0.58
NUP98-219ENST00000532475 ZFP91Q96JP5 570 aaPredicted RBP11.41□□□□□ -0.58
NUP98-219ENST00000532475 MKRN1Q9UHC7 482 aaKnown RBP11.41□□□□□ -0.58
NUP98-219ENST00000532475 SBF1O95248 1867 aa11.4□□□□□ -0.59
NUP98-219ENST00000532475 NFKBIEO00221 500 aa11.39□□□□□ -0.59
NUP98-219ENST00000532475 FOXN1O15353 648 aa11.39□□□□□ -0.59
NUP98-219ENST00000532475 POTEIP0CG38 1075 aa11.39□□□□□ -0.59
NUP98-219ENST00000532475 POTEJP0CG39 1038 aa11.39□□□□□ -0.59
NUP98-219ENST00000532475 MTHFSP49914 203 aa11.39□□□□□ -0.59
NUP98-219ENST00000532475 NFIXQ14938 502 aa11.39□□□□□ -0.59
NUP98-219ENST00000532475 FAM212AQ96EL1 285 aa11.39□□□□□ -0.59
NUP98-219ENST00000532475 KDM6AO15550 1401 aaPredicted RBP11.38□□□□□ -0.59
NUP98-219ENST00000532475 ARFGEF1Q9Y6D6 1849 aa11.38□□□□□ -0.59
NUP98-219ENST00000532475 PLEKHO1Q53GL0 409 aaPredicted RBP11.38□□□□□ -0.59
NUP98-219ENST00000532475 ZNF530Q6P9A1 599 aaPredicted RBP11.38□□□□□ -0.59
NUP98-219ENST00000532475 BCL2L12Q9HB09 334 aa11.38□□□□□ -0.59
NUP98-219ENST00000532475 ZC3H4Q9UPT8 1303 aaKnown RBP11.37□□□□□ -0.59
NUP98-219ENST00000532475 ZPR1O75312 459 aa11.37□□□□□ -0.59
NUP98-219ENST00000532475 HSP90AB1P08238 724 aaKnown RBP11.37□□□□□ -0.59
NUP98-219ENST00000532475 NUBP1P53384 320 aa11.37□□□□□ -0.59
NUP98-219ENST00000532475 AEBP1Q8IUX7 1158 aa11.37□□□□□ -0.59
NUP98-219ENST00000532475 DNAJC10Q8IXB1 793 aa11.37□□□□□ -0.59
NUP98-219ENST00000532475 TTLL6Q8N841 843 aa11.37□□□□□ -0.59
NUP98-219ENST00000532475 SLC34A2O95436 690 aa11.36□□□□□ -0.59
NUP98-219ENST00000532475 SERPINB2P05120 415 aa11.36□□□□□ -0.59
NUP98-219ENST00000532475 DPY19L2Q6NUT2 758 aa11.36□□□□□ -0.59
NUP98-219ENST00000532475 C2CD5Q86YS7 1000 aa11.36□□□□□ -0.59
NUP98-219ENST00000532475 RNF39Q9H2S5 420 aa11.36□□□□□ -0.59
NUP98-219ENST00000532475 ZMYND10O75800 440 aa11.35□□□□□ -0.59
NUP98-219ENST00000532475 PDIA4P13667 645 aaKnown RBP11.35□□□□□ -0.59
NUP98-219ENST00000532475 CDCA8Q53HL2 280 aa11.35□□□□□ -0.59
NUP98-219ENST00000532475 CCDC24Q8N4L8 307 aa11.35□□□□□ -0.59
NUP98-219ENST00000532475 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
NUP98-219ENST00000532475 NARFQ9UHQ1 456 aa11.35□□□□□ -0.59
NUP98-219ENST00000532475 H0YIN7 160 aa11.34□□□□□ -0.59
NUP98-219ENST00000532475 C21orf2O43822 256 aa11.34□□□□□ -0.59
NUP98-219ENST00000532475 DDNO94850 711 aaPredicted RBP11.34□□□□□ -0.59
NUP98-219ENST00000532475 CYP19A1P11511 503 aaPredicted RBP11.34□□□□□ -0.59
NUP98-219ENST00000532475 SLC39A6Q13433 755 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms