RNA–Protein interactions for RNA: ENST00000531525.2

ATM-216, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-216ENST00000531525 SOWAHDA6NJG2 315 aa9.01□□□□□ -0.97
ATM-216ENST00000531525 SEMA3FQ13275 785 aa9.01□□□□□ -0.97
ATM-216ENST00000531525 CERS3Q8IU89 383 aa9.01□□□□□ -0.97
ATM-216ENST00000531525 CEP126Q9P2H0 1117 aa9.01□□□□□ -0.97
ATM-216ENST00000531525 GMPR2Q9P2T1 348 aaKnown RBP9.01□□□□□ -0.97
ATM-216ENST00000531525 HIRIP3Q9BW71 556 aaPredicted RBP9□□□□□ -0.97
ATM-216ENST00000531525 PGPEP1Q9NXJ5 209 aa9□□□□□ -0.97
ATM-216ENST00000531525 RAPGEF2Q9Y4G8 1499 aa9□□□□□ -0.97
ATM-216ENST00000531525 ZNF784Q8NCA9 323 aaPredicted RBP9□□□□□ -0.97
ATM-216ENST00000531525 ZMIZ1Q9ULJ6 1067 aa9□□□□□ -0.97
ATM-216ENST00000531525 ABCA8O94911 1581 aa8.99□□□□□ -0.97
ATM-216ENST00000531525 SERPINB4P48594 390 aa8.99□□□□□ -0.97
ATM-216ENST00000531525 CBLBQ13191 982 aa8.99□□□□□ -0.97
ATM-216ENST00000531525 MRPL14Q6P1L8 145 aaKnown RBP8.99□□□□□ -0.97
ATM-216ENST00000531525 Q6ZVU0 165 aa8.99□□□□□ -0.97
ATM-216ENST00000531525 MEIOBQ8N635 442 aa8.99□□□□□ -0.97
ATM-216ENST00000531525 LILRA1O75019 489 aa8.98□□□□□ -0.97
ATM-216ENST00000531525 ZNF787Q6DD87 383 aa8.98□□□□□ -0.97
ATM-216ENST00000531525 GIMAP6Q6P9H5 292 aa8.98□□□□□ -0.97
ATM-216ENST00000531525 NOVA2Q9UNW9 492 aaKnown RBP8.98□□□□□ -0.97
ATM-216ENST00000531525 ADAMTSL3P82987 1691 aa8.97□□□□□ -0.97
ATM-216ENST00000531525 ATP9BO43861 1147 aa8.97□□□□□ -0.97
ATM-216ENST00000531525 TSNAXIP1Q2TAA8 658 aa8.97□□□□□ -0.97
ATM-216ENST00000531525 RNF20Q5VTR2 975 aa8.97□□□□□ -0.97
ATM-216ENST00000531525 NPAS4Q8IUM7 802 aa8.97□□□□□ -0.97
ATM-216ENST00000531525 PHTF2Q8N3S3 785 aa8.97□□□□□ -0.97
ATM-216ENST00000531525 CD109Q6YHK3 1445 aa8.97□□□□□ -0.97
ATM-216ENST00000531525 SSFA2P28290 1259 aa8.96□□□□□ -0.97
ATM-216ENST00000531525 SOX11P35716 441 aa8.96□□□□□ -0.97
ATM-216ENST00000531525 TAGLNQ01995 201 aaKnown RBP8.96□□□□□ -0.97
ATM-216ENST00000531525 ELOAQ14241 798 aaKnown RBP8.96□□□□□ -0.97
ATM-216ENST00000531525 NOL8Q76FK4 1167 aaKnown RBP8.96□□□□□ -0.97
ATM-216ENST00000531525 VAMP1P23763 118 aa8.95□□□□□ -0.98
ATM-216ENST00000531525 ERCC5P28715 1186 aaPredicted RBP8.95□□□□□ -0.98
ATM-216ENST00000531525 ADD1P35611 737 aaKnown RBP8.95□□□□□ -0.98
ATM-216ENST00000531525 KANK4Q5T7N3 995 aaPredicted RBP8.95□□□□□ -0.98
ATM-216ENST00000531525 LINC00528Q8N1L1 170 aa8.95□□□□□ -0.98
ATM-216ENST00000531525 ARAP3Q8WWN8 1544 aa8.95□□□□□ -0.98
ATM-216ENST00000531525 TRIM47Q96LD4 638 aa8.95□□□□□ -0.98
ATM-216ENST00000531525 ZFP42Q96MM3 310 aa8.95□□□□□ -0.98
ATM-216ENST00000531525 CCDC85AQ96PX6 553 aaPredicted RBP8.95□□□□□ -0.98
ATM-216ENST00000531525 GOLGA3Q08378 1498 aa8.95□□□□□ -0.98
ATM-216ENST00000531525 DPH6Q7L8W6 267 aa8.95□□□□□ -0.98
ATM-216ENST00000531525 PURBQ96QR8 312 aaKnown RBP8.95□□□□□ -0.98
ATM-216ENST00000531525 SENP2Q9HC62 589 aa8.95□□□□□ -0.98
ATM-216ENST00000531525 CYLDQ9NQC7 956 aa8.95□□□□□ -0.98
ATM-216ENST00000531525 RECKO95980 971 aa8.94□□□□□ -0.98
ATM-216ENST00000531525 TSGA10IPQ3SY00 556 aa8.94□□□□□ -0.98
ATM-216ENST00000531525 ZNF662Q6ZS27 426 aa8.94□□□□□ -0.98
ATM-216ENST00000531525 FBXO41Q8TF61 875 aa8.94□□□□□ -0.98
ATM-216ENST00000531525 CHIC2Q9UKJ5 165 aa8.94□□□□□ -0.98
ATM-216ENST00000531525 PCDHB11Q9Y5F2 797 aa8.94□□□□□ -0.98
ATM-216ENST00000531525 BCORL1Q5H9F3 1711 aa8.94□□□□□ -0.98
ATM-216ENST00000531525 ABCA9Q8IUA7 1624 aa8.93□□□□□ -0.98
ATM-216ENST00000531525 C11orf95C9JLR9 678 aaPredicted RBP8.93□□□□□ -0.98
ATM-216ENST00000531525 MARCH6O60337 910 aa8.93□□□□□ -0.98
ATM-216ENST00000531525 SNRPBP14678 240 aaKnown RBP8.93□□□□□ -0.98
ATM-216ENST00000531525 SCTRP47872 440 aa8.93□□□□□ -0.98
ATM-216ENST00000531525 ERVK-9P63128 1117 aa8.93□□□□□ -0.98
ATM-216ENST00000531525 KDF1Q8NAX2 398 aaPredicted RBP8.93□□□□□ -0.98
ATM-216ENST00000531525 TSEN34Q9BSV6 310 aaKnown RBP8.93□□□□□ -0.98
ATM-216ENST00000531525 PCF11O94913 1555 aaKnown RBP8.93□□□□□ -0.98
ATM-216ENST00000531525 PTPRMP28827 1452 aa8.93□□□□□ -0.98
ATM-216ENST00000531525 MADDQ8WXG6 1647 aa8.92□□□□□ -0.98
ATM-216ENST00000531525 SCARF1Q14162 830 aa8.92□□□□□ -0.98
ATM-216ENST00000531525 SLFNL1Q499Z3 407 aa8.92□□□□□ -0.98
ATM-216ENST00000531525 C6orf118Q5T5N4 469 aa8.92□□□□□ -0.98
ATM-216ENST00000531525 KIFC2Q96AC6 838 aa8.92□□□□□ -0.98
ATM-216ENST00000531525 AGBL1Q96MI9 1066 aa8.92□□□□□ -0.98
ATM-216ENST00000531525 CDCA7Q9BWT1 371 aaPredicted RBP8.92□□□□□ -0.98
ATM-216ENST00000531525 FRMPD1Q5SYB0 1578 aa8.92□□□□□ -0.98
ATM-216ENST00000531525 ADH1AP07327 375 aa8.91□□□□□ -0.98
ATM-216ENST00000531525 CC2D2BQ6DHV5 1058 aa8.91□□□□□ -0.98
ATM-216ENST00000531525 RNF135Q8IUD6 432 aa8.91□□□□□ -0.98
ATM-216ENST00000531525 SLAIN2Q9P270 581 aa8.91□□□□□ -0.98
ATM-216ENST00000531525 UPP2O95045 317 aa8.9□□□□□ -0.98
ATM-216ENST00000531525 BMP2P12643 396 aa8.9□□□□□ -0.98
ATM-216ENST00000531525 SCNN1AP37088 669 aa8.9□□□□□ -0.98
ATM-216ENST00000531525 C9orf131Q5VYM1 1079 aa8.9□□□□□ -0.98
ATM-216ENST00000531525 ARHGEF40Q8TER5 1519 aa8.9□□□□□ -0.98
ATM-216ENST00000531525 LMTK3Q96Q04 1460 aa8.9□□□□□ -0.99
ATM-216ENST00000531525 PIK3CDO00329 1044 aa8.9□□□□□ -0.99
ATM-216ENST00000531525 RELBQ01201 579 aa8.9□□□□□ -0.99
ATM-216ENST00000531525 PSMD1Q99460 953 aa8.9□□□□□ -0.99
ATM-216ENST00000531525 DNAJC2Q99543 621 aaKnown RBP8.9□□□□□ -0.99
ATM-216ENST00000531525 BCL11AQ9H165 835 aa8.9□□□□□ -0.99
ATM-216ENST00000531525 RIMS1Q86UR5 1692 aaKnown RBP8.89□□□□□ -0.99
ATM-216ENST00000531525 SPINT1O43278 529 aa8.89□□□□□ -0.99
ATM-216ENST00000531525 ZNF526Q8TF50 670 aaPredicted RBP8.89□□□□□ -0.99
ATM-216ENST00000531525 UBE2Q2Q8WVN8 375 aa8.89□□□□□ -0.99
ATM-216ENST00000531525 OSBPL3Q9H4L5 887 aa8.89□□□□□ -0.99
ATM-216ENST00000531525 TRIM52Q96A61 297 aa8.88□□□□□ -0.99
ATM-216ENST00000531525 DOLKQ9UPQ8 538 aa8.88□□□□□ -0.99
ATM-216ENST00000531525 NEO1Q92859 1461 aa8.87□□□□□ -0.99
ATM-216ENST00000531525 RICTORQ6R327 1708 aa8.87□□□□□ -0.99
ATM-216ENST00000531525 SOS2Q07890 1332 aaPredicted RBP8.87□□□□□ -0.99
ATM-216ENST00000531525 ATP2B4P23634 1241 aa8.87□□□□□ -0.99
ATM-216ENST00000531525 PTGIRP43119 386 aa8.87□□□□□ -0.99
ATM-216ENST00000531525 PLPP7Q8NBV4 271 aa8.87□□□□□ -0.99
ATM-216ENST00000531525 ZNF395Q9H8N7 513 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 126.9 ms