RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 AIDAQ96BJ3 306 aa8.9□□□□□ -0.98
USP47-211ENST00000531513 PCDHGC4Q9Y5F7 938 aa8.9□□□□□ -0.98
USP47-211ENST00000531513 DCDC2BA2VCK2 349 aa8.89□□□□□ -0.99
USP47-211ENST00000531513 TMEM229AB2RXF0 380 aa8.89□□□□□ -0.99
USP47-211ENST00000531513 EPXP11678 715 aa8.89□□□□□ -0.99
USP47-211ENST00000531513 SEMA3FQ13275 785 aa8.89□□□□□ -0.99
USP47-211ENST00000531513 GRIN2CQ14957 1233 aa8.89□□□□□ -0.99
USP47-211ENST00000531513 ALYREFQ86V81 257 aaKnown RBP8.89□□□□□ -0.99
USP47-211ENST00000531513 NLRP8Q86W28 1048 aa8.89□□□□□ -0.99
USP47-211ENST00000531513 SUV39H2Q9H5I1 410 aa8.89□□□□□ -0.99
USP47-211ENST00000531513 HCN2Q9UL51 889 aa8.89□□□□□ -0.99
USP47-211ENST00000531513 GTF3C3Q9Y5Q9 886 aa8.89□□□□□ -0.99
USP47-211ENST00000531513 USP3Q9Y6I4 520 aa8.89□□□□□ -0.99
USP47-211ENST00000531513 NEURL1BA8MQ27 555 aa8.88□□□□□ -0.99
USP47-211ENST00000531513 PIK3CDO00329 1044 aa8.88□□□□□ -0.99
USP47-211ENST00000531513 ATXN7O15265 892 aaPredicted RBP8.88□□□□□ -0.99
USP47-211ENST00000531513 MCM6Q14566 821 aa8.88□□□□□ -0.99
USP47-211ENST00000531513 IQSEC3Q9UPP2 1182 aaPredicted RBP8.88□□□□□ -0.99
USP47-211ENST00000531513 A0A1W2PNR3 127 aa8.87□□□□□ -0.99
USP47-211ENST00000531513 CD33P20138 364 aa8.87□□□□□ -0.99
USP47-211ENST00000531513 SOX11P35716 441 aa8.87□□□□□ -0.99
USP47-211ENST00000531513 MTFR1Q15390 333 aa8.87□□□□□ -0.99
USP47-211ENST00000531513 NBPF1Q3BBV0 1214 aa8.87□□□□□ -0.99
USP47-211ENST00000531513 BTBD6Q96KE9 485 aa8.87□□□□□ -0.99
USP47-211ENST00000531513 SLC4A9Q96Q91 983 aa8.87□□□□□ -0.99
USP47-211ENST00000531513 TIMELESSQ9UNS1 1208 aa8.87□□□□□ -0.99
USP47-211ENST00000531513 A6NJY4 79 aa8.86□□□□□ -0.99
USP47-211ENST00000531513 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.86□□□□□ -0.99
USP47-211ENST00000531513 GNB5O14775 395 aa8.86□□□□□ -0.99
USP47-211ENST00000531513 MAPTP10636 758 aaKnown RBP8.86□□□□□ -0.99
USP47-211ENST00000531513 BAG6P46379 1132 aa8.86□□□□□ -0.99
USP47-211ENST00000531513 DGKGP49619 791 aa8.86□□□□□ -0.99
USP47-211ENST00000531513 TNP2Q05952 138 aa8.86□□□□□ -0.99
USP47-211ENST00000531513 ARSJQ5FYB0 599 aaPredicted RBP8.86□□□□□ -0.99
USP47-211ENST00000531513 CDK2AP1O14519 115 aa8.85□□□□□ -0.99
USP47-211ENST00000531513 KRTAP9-2Q9BYQ4 174 aa8.85□□□□□ -0.99
USP47-211ENST00000531513 ZDHHC3Q9NYG2 299 aa8.85□□□□□ -0.99
USP47-211ENST00000531513 PCDHGA11Q9Y5H2 935 aa8.85□□□□□ -0.99
USP47-211ENST00000531513 K7ELQ4 463 aaPredicted RBP8.84□□□□□ -0.99
USP47-211ENST00000531513 KHNYNO15037 678 aaKnown RBP8.84□□□□□ -0.99
USP47-211ENST00000531513 TATP17735 454 aaPredicted RBP8.84□□□□□ -0.99
USP47-211ENST00000531513 ADH6P28332 368 aa8.84□□□□□ -0.99
USP47-211ENST00000531513 TMEM132AQ24JP5 1023 aa8.84□□□□□ -0.99
USP47-211ENST00000531513 FAM182BQ5T319 152 aa8.84□□□□□ -0.99
USP47-211ENST00000531513 CABP1Q9NZU7 370 aa8.84□□□□□ -0.99
USP47-211ENST00000531513 KLF15Q9UIH9 416 aa8.84□□□□□ -0.99
USP47-211ENST00000531513 PIK3R2O00459 728 aa8.83□□□□□ -1
USP47-211ENST00000531513 CHSY3Q70JA7 882 aa8.83□□□□□ -1
USP47-211ENST00000531513 ERICH6Q7L0X2 663 aa8.83□□□□□ -1
USP47-211ENST00000531513 FCHSD1Q86WN1 690 aa8.83□□□□□ -1
USP47-211ENST00000531513 ZIC5Q96T25 663 aa8.83□□□□□ -1
USP47-211ENST00000531513 PARP3Q9Y6F1 533 aa8.83□□□□□ -1
USP47-211ENST00000531513 FAM157BP0CG42 384 aa8.82□□□□□ -1
USP47-211ENST00000531513 EML3Q32P44 896 aa8.82□□□□□ -1
USP47-211ENST00000531513 Q8N3U1 123 aa8.82□□□□□ -1
USP47-211ENST00000531513 COG6Q9Y2V7 657 aa8.82□□□□□ -1
USP47-211ENST00000531513 SKIP12755 728 aa8.81□□□□□ -1
USP47-211ENST00000531513 AVENQ9NQS1 362 aaPredicted RBP8.81□□□□□ -1
USP47-211ENST00000531513 GJA3Q9Y6H8 435 aa8.81□□□□□ -1
USP47-211ENST00000531513 FURINP09958 794 aa8.8□□□□□ -1
USP47-211ENST00000531513 TXLNAP40222 546 aa8.8□□□□□ -1
USP47-211ENST00000531513 PCBP4P57723 403 aaKnown RBP8.8□□□□□ -1
USP47-211ENST00000531513 GTF2IP78347 998 aa8.8□□□□□ -1
USP47-211ENST00000531513 ZNF468Q5VIY5 522 aaPredicted RBP8.8□□□□□ -1
USP47-211ENST00000531513 ZDHHC1Q8WTX9 485 aa8.8□□□□□ -1
USP47-211ENST00000531513 PSMG3-AS1Q96PY0 264 aa8.8□□□□□ -1
USP47-211ENST00000531513 STRN4Q9NRL3 753 aa8.8□□□□□ -1
USP47-211ENST00000531513 ZNF358Q9NW07 568 aa8.8□□□□□ -1
USP47-211ENST00000531513 NOP53Q9NZM5 478 aaKnown RBP8.8□□□□□ -1
USP47-211ENST00000531513 KRTAP9-6A0A140TA67 174 aa8.79□□□□□ -1
USP47-211ENST00000531513 C1QTNF9BB2RNN3 333 aa8.79□□□□□ -1
USP47-211ENST00000531513 PSME1Q06323 249 aa8.79□□□□□ -1
USP47-211ENST00000531513 SAMD5Q5TGI4 173 aa8.79□□□□□ -1
USP47-211ENST00000531513 BICDL1Q6ZP65 573 aa8.79□□□□□ -1
USP47-211ENST00000531513 CD163Q86VB7 1156 aa8.79□□□□□ -1
USP47-211ENST00000531513 SCHIP1Q9P0W5 487 aaPredicted RBP8.79□□□□□ -1
USP47-211ENST00000531513 NOD1Q9Y239 953 aa8.79□□□□□ -1
USP47-211ENST00000531513 BACH1O14867 736 aa8.78□□□□□ -1
USP47-211ENST00000531513 EFSO43281 561 aa8.78□□□□□ -1
USP47-211ENST00000531513 CHRNA4P43681 627 aa8.78□□□□□ -1
USP47-211ENST00000531513 NCOA4Q13772 614 aa8.78□□□□□ -1
USP47-211ENST00000531513 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.78□□□□□ -1
USP47-211ENST00000531513 ALG2Q9H553 416 aa8.78□□□□□ -1
USP47-211ENST00000531513 PRR12Q9ULL5 1215 aa8.78□□□□□ -1
USP47-211ENST00000531513 EPHA4P54764 986 aa8.77□□□□□ -1.01
USP47-211ENST00000531513 NFATC2IPQ8NCF5 419 aa8.77□□□□□ -1.01
USP47-211ENST00000531513 MARK1Q9P0L2 795 aa8.77□□□□□ -1.01
USP47-211ENST00000531513 DEPDC4Q8N2C3 294 aa8.76□□□□□ -1.01
USP47-211ENST00000531513 L3MBTL2Q969R5 705 aa8.76□□□□□ -1.01
USP47-211ENST00000531513 TRIM11Q96F44 468 aa8.76□□□□□ -1.01
USP47-211ENST00000531513 USP17L5A8MUK1 530 aa8.75□□□□□ -1.01
USP47-211ENST00000531513 LZTS3O60299 673 aaPredicted RBP8.75□□□□□ -1.01
USP47-211ENST00000531513 LAMC2Q13753 1193 aa8.75□□□□□ -1.01
USP47-211ENST00000531513 TEAD4Q15561 434 aa8.75□□□□□ -1.01
USP47-211ENST00000531513 TBCELQ5QJ74 424 aa8.75□□□□□ -1.01
USP47-211ENST00000531513 SLC9A9Q8IVB4 645 aa8.75□□□□□ -1.01
USP47-211ENST00000531513 POM121Q96HA1 1249 aa8.75□□□□□ -1.01
USP47-211ENST00000531513 LRRC69Q6ZNQ3 347 aa8.74□□□□□ -1.01
USP47-211ENST00000531513 EML1O00423 815 aa8.73□□□□□ -1.01
USP47-211ENST00000531513 NOS2P35228 1153 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms