RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 CLCN1P35523 988 aa10.14□□□□□ -0.79
TRIM53CP-201ENST00000531490 REPIN1Q9BWE0 567 aaKnown RBP10.14□□□□□ -0.79
TRIM53CP-201ENST00000531490 PPP1R1BQ9UD71 204 aaPredicted RBP10.14□□□□□ -0.79
TRIM53CP-201ENST00000531490 ANKARQ7Z5J8 1434 aa10.13□□□□□ -0.79
TRIM53CP-201ENST00000531490 ABCA3Q99758 1704 aa10.13□□□□□ -0.79
TRIM53CP-201ENST00000531490 CD46P15529 392 aa10.13□□□□□ -0.79
TRIM53CP-201ENST00000531490 NKX2-3Q8TAU0 364 aa10.13□□□□□ -0.79
TRIM53CP-201ENST00000531490 WASLO00401 505 aaPredicted RBP10.12□□□□□ -0.79
TRIM53CP-201ENST00000531490 PDE3BQ13370 1112 aa10.12□□□□□ -0.79
TRIM53CP-201ENST00000531490 AMHR2Q16671 573 aa10.12□□□□□ -0.79
TRIM53CP-201ENST00000531490 PUS10Q3MIT2 529 aaKnown RBP10.12□□□□□ -0.79
TRIM53CP-201ENST00000531490 LARP1Q6PKG0 1096 aaKnown RBP10.12□□□□□ -0.79
TRIM53CP-201ENST00000531490 AK7Q96M32 723 aa10.12□□□□□ -0.79
TRIM53CP-201ENST00000531490 PDGFDQ9GZP0 370 aaPredicted RBP10.12□□□□□ -0.79
TRIM53CP-201ENST00000531490 FAM217BQ9NTX9 383 aaPredicted RBP10.12□□□□□ -0.79
TRIM53CP-201ENST00000531490 THSD7AQ9UPZ6 1657 aa10.11□□□□□ -0.79
TRIM53CP-201ENST00000531490 RGPD8O14715 1765 aaPredicted RBP10.11□□□□□ -0.79
TRIM53CP-201ENST00000531490 KNDC1Q76NI1 1749 aa10.11□□□□□ -0.79
TRIM53CP-201ENST00000531490 KCNQ2O43526 872 aa10.11□□□□□ -0.79
TRIM53CP-201ENST00000531490 FUT2Q10981 343 aa10.11□□□□□ -0.79
TRIM53CP-201ENST00000531490 NEUROD1Q13562 356 aa10.11□□□□□ -0.79
TRIM53CP-201ENST00000531490 NBPF8Q3BBV2 869 aa10.11□□□□□ -0.79
TRIM53CP-201ENST00000531490 NBPF14Q5TI25 921 aa10.11□□□□□ -0.79
TRIM53CP-201ENST00000531490 SPON1Q9HCB6 807 aa10.11□□□□□ -0.79
TRIM53CP-201ENST00000531490 TRIM66O15016 1216 aa10.1□□□□□ -0.79
TRIM53CP-201ENST00000531490 EVA1CP58658 441 aa10.1□□□□□ -0.79
TRIM53CP-201ENST00000531490 PTF1AQ7RTS3 328 aa10.1□□□□□ -0.79
TRIM53CP-201ENST00000531490 SLC24A3Q9HC58 644 aa10.1□□□□□ -0.79
TRIM53CP-201ENST00000531490 TNS1Q9HBL0 1735 aaKnown RBP10.1□□□□□ -0.79
TRIM53CP-201ENST00000531490 PARD3Q8TEW0 1356 aa10.09□□□□□ -0.79
TRIM53CP-201ENST00000531490 COL14A1Q05707 1796 aaKnown RBP10.09□□□□□ -0.79
TRIM53CP-201ENST00000531490 RGPD1P0DJD0 1748 aa10.09□□□□□ -0.79
TRIM53CP-201ENST00000531490 TRPM3Q9HCF6 1732 aaPredicted RBP10.08□□□□□ -0.8
TRIM53CP-201ENST00000531490 SSH2Q76I76 1423 aa10.08□□□□□ -0.8
TRIM53CP-201ENST00000531490 TLL1O43897 1013 aa10.08□□□□□ -0.8
TRIM53CP-201ENST00000531490 NR1I2O75469 434 aa10.08□□□□□ -0.8
TRIM53CP-201ENST00000531490 ZBTB7AO95365 584 aa10.08□□□□□ -0.8
TRIM53CP-201ENST00000531490 ATP6V1AP38606 617 aa10.08□□□□□ -0.8
TRIM53CP-201ENST00000531490 TTLL12Q14166 644 aaPredicted RBP10.08□□□□□ -0.8
TRIM53CP-201ENST00000531490 MORN1Q5T089 497 aa10.08□□□□□ -0.8
TRIM53CP-201ENST00000531490 SCUBE3Q8IX30 993 aa10.08□□□□□ -0.8
TRIM53CP-201ENST00000531490 TCP11L2Q8N4U5 519 aa10.08□□□□□ -0.8
TRIM53CP-201ENST00000531490 L3MBTL2Q969R5 705 aa10.08□□□□□ -0.8
TRIM53CP-201ENST00000531490 NUDT16Q96DE0 195 aaKnown RBP10.08□□□□□ -0.8
TRIM53CP-201ENST00000531490 ZNF784Q8NCA9 323 aaPredicted RBP10.07□□□□□ -0.8
TRIM53CP-201ENST00000531490 PCGF6Q9BYE7 350 aa10.07□□□□□ -0.8
TRIM53CP-201ENST00000531490 ADGRB2O60241 1585 aa10.07□□□□□ -0.8
TRIM53CP-201ENST00000531490 ALS2Q96Q42 1657 aa10.07□□□□□ -0.8
TRIM53CP-201ENST00000531490 NBPF1Q3BBV0 1214 aa10.06□□□□□ -0.8
TRIM53CP-201ENST00000531490 PPP1R18Q6NYC8 613 aa10.06□□□□□ -0.8
TRIM53CP-201ENST00000531490 ADGRB1O14514 1584 aa10.06□□□□□ -0.8
TRIM53CP-201ENST00000531490 DLC1Q96QB1 1528 aa10.06□□□□□ -0.8
TRIM53CP-201ENST00000531490 TULP4Q9NRJ4 1543 aa10.06□□□□□ -0.8
TRIM53CP-201ENST00000531490 ZBTB7CA1YPR0 619 aa10.05□□□□□ -0.8
TRIM53CP-201ENST00000531490 SSTR3P32745 418 aaPredicted RBP10.05□□□□□ -0.8
TRIM53CP-201ENST00000531490 GIGYF2Q6Y7W6 1299 aaKnown RBP10.05□□□□□ -0.8
TRIM53CP-201ENST00000531490 NINLQ9Y2I6 1382 aa10.05□□□□□ -0.8
TRIM53CP-201ENST00000531490 CAMTA1Q9Y6Y1 1673 aa10.04□□□□□ -0.8
TRIM53CP-201ENST00000531490 EIF3AQ14152 1382 aaKnown RBP10.04□□□□□ -0.8
TRIM53CP-201ENST00000531490 KDM4AO75164 1064 aa10.04□□□□□ -0.8
TRIM53CP-201ENST00000531490 RGS20O76081 388 aa10.04□□□□□ -0.8
TRIM53CP-201ENST00000531490 PARP9Q8IXQ6 854 aa10.04□□□□□ -0.8
TRIM53CP-201ENST00000531490 CDK19Q9BWU1 502 aa10.04□□□□□ -0.8
TRIM53CP-201ENST00000531490 ACEP12821 1306 aa10.04□□□□□ -0.8
TRIM53CP-201ENST00000531490 ABTB2Q8N961 1025 aa10.03□□□□□ -0.8
TRIM53CP-201ENST00000531490 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.03□□□□□ -0.8
TRIM53CP-201ENST00000531490 SLC27A5Q9Y2P5 690 aa10.03□□□□□ -0.8
TRIM53CP-201ENST00000531490 ATP7BP35670 1465 aa10.03□□□□□ -0.8
TRIM53CP-201ENST00000531490 SENP3-EIF4A1A0A087X0R7 540 aa10.02□□□□□ -0.8
TRIM53CP-201ENST00000531490 NUP188Q5SRE5 1749 aa10.02□□□□□ -0.81
TRIM53CP-201ENST00000531490 ADH1BP00325 375 aa10.01□□□□□ -0.81
TRIM53CP-201ENST00000531490 GCP02774 474 aa10.01□□□□□ -0.81
TRIM53CP-201ENST00000531490 PDE4DQ08499 809 aa10.01□□□□□ -0.81
TRIM53CP-201ENST00000531490 GRIPAP1Q4V328 841 aa10.01□□□□□ -0.81
TRIM53CP-201ENST00000531490 CRYBG1Q9Y4K1 1723 aa10.01□□□□□ -0.81
TRIM53CP-201ENST00000531490 RREB1Q92766 1687 aa10.01□□□□□ -0.81
TRIM53CP-201ENST00000531490 MARCH10Q8NA82 808 aaPredicted RBP10.01□□□□□ -0.81
TRIM53CP-201ENST00000531490 THAP11Q96EK4 314 aa10.01□□□□□ -0.81
TRIM53CP-201ENST00000531490 SYT17Q9BSW7 474 aa10.01□□□□□ -0.81
TRIM53CP-201ENST00000531490 FHDC1Q9C0D6 1143 aaPredicted RBP10.01□□□□□ -0.81
TRIM53CP-201ENST00000531490 USP19O94966 1318 aa10□□□□□ -0.81
TRIM53CP-201ENST00000531490 CPDO75976 1380 aa10□□□□□ -0.81
TRIM53CP-201ENST00000531490 PLEKHG3A1L390 1219 aa10□□□□□ -0.81
TRIM53CP-201ENST00000531490 PLSCR1O15162 318 aa10□□□□□ -0.81
TRIM53CP-201ENST00000531490 USP46P62068 366 aa10□□□□□ -0.81
TRIM53CP-201ENST00000531490 HLA-CQ95604 372 aa10□□□□□ -0.81
TRIM53CP-201ENST00000531490 SPSB2Q99619 263 aa10□□□□□ -0.81
TRIM53CP-201ENST00000531490 THRAP3Q9Y2W1 955 aaKnown RBP10□□□□□ -0.81
TRIM53CP-201ENST00000531490 POLR3AO14802 1390 aaPredicted RBP9.99□□□□□ -0.81
TRIM53CP-201ENST00000531490 OVOS2A0A0G2JMS6 1433 aa9.99□□□□□ -0.81
TRIM53CP-201ENST00000531490 OVOS2A0A0J9YW53 1432 aa9.99□□□□□ -0.81
TRIM53CP-201ENST00000531490 OVOS2Q6IE36 1432 aa9.99□□□□□ -0.81
TRIM53CP-201ENST00000531490 CEP350Q5VT06 3117 aa9.99□□□□□ -0.81
TRIM53CP-201ENST00000531490 COL5A2P05997 1499 aaPredicted RBP9.99□□□□□ -0.81
TRIM53CP-201ENST00000531490 HOXA2O43364 376 aa9.99□□□□□ -0.81
TRIM53CP-201ENST00000531490 S1PR4O95977 384 aa9.99□□□□□ -0.81
TRIM53CP-201ENST00000531490 MS4A1P11836 297 aa9.99□□□□□ -0.81
TRIM53CP-201ENST00000531490 GGCXP38435 758 aa9.99□□□□□ -0.81
TRIM53CP-201ENST00000531490 C1QTNF8P60827 252 aa9.99□□□□□ -0.81
TRIM53CP-201ENST00000531490 DDB1Q16531 1140 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms