RNA–Protein interactions for RNA: ENST00000530216.5

SHARPIN-204, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-204ENST00000530216 PRKRIP1Q9H875 184 aaPredicted RBP20.84■□□□□ 0.93
SHARPIN-204ENST00000530216 UBR2Q8IWV8 1755 aa20.84■□□□□ 0.93
SHARPIN-204ENST00000530216 SRP68Q9UHB9 627 aaKnown RBP20.83■□□□□ 0.93
SHARPIN-204ENST00000530216 SOS1Q07889 1333 aaPredicted RBP20.82■□□□□ 0.92
SHARPIN-204ENST00000530216 USP42Q9H9J4 1324 aaKnown RBP20.82■□□□□ 0.92
SHARPIN-204ENST00000530216 ZNF316A6NFI3 1004 aaPredicted RBP20.82■□□□□ 0.92
SHARPIN-204ENST00000530216 ZBTB1Q9Y2K1 713 aa20.82■□□□□ 0.92
SHARPIN-204ENST00000530216 ZNF330Q9Y3S2 320 aaPredicted RBP20.82■□□□□ 0.92
SHARPIN-204ENST00000530216 A0A087WZG4 1122 aa20.81■□□□□ 0.92
SHARPIN-204ENST00000530216 KCNQ3O43525 872 aa20.81■□□□□ 0.92
SHARPIN-204ENST00000530216 PNISRQ8TF01 805 aaKnown RBP20.81■□□□□ 0.92
SHARPIN-204ENST00000530216 C4AP0C0L4 1744 aa20.81■□□□□ 0.92
SHARPIN-204ENST00000530216 DLG5Q8TDM6 1919 aa20.8■□□□□ 0.92
SHARPIN-204ENST00000530216 RIPK4P57078 832 aa20.8■□□□□ 0.92
SHARPIN-204ENST00000530216 USPL1Q5W0Q7 1092 aa20.8■□□□□ 0.92
SHARPIN-204ENST00000530216 COL15A1P39059 1388 aa20.8■□□□□ 0.92
SHARPIN-204ENST00000530216 SNRPA1P09661 255 aaKnown RBP20.79■□□□□ 0.92
SHARPIN-204ENST00000530216 FKBP8Q14318 412 aa20.79■□□□□ 0.92
SHARPIN-204ENST00000530216 NARFQ9UHQ1 456 aa20.79■□□□□ 0.92
SHARPIN-204ENST00000530216 GRIN3BO60391 1043 aa20.78■□□□□ 0.92
SHARPIN-204ENST00000530216 LMOD3Q0VAK6 560 aa20.78■□□□□ 0.92
SHARPIN-204ENST00000530216 MIS18AQ9NYP9 233 aa20.78■□□□□ 0.92
SHARPIN-204ENST00000530216 CCDC146Q8IYE0 955 aa20.77■□□□□ 0.92
SHARPIN-204ENST00000530216 A1BGP04217 495 aa20.76■□□□□ 0.91
SHARPIN-204ENST00000530216 NEUROD2Q15784 382 aa20.76■□□□□ 0.91
SHARPIN-204ENST00000530216 RUNDC1Q96C34 613 aa20.76■□□□□ 0.91
SHARPIN-204ENST00000530216 GOLGB1Q14789 3259 aaKnown RBP20.75■□□□□ 0.91
SHARPIN-204ENST00000530216 IL6STP40189 918 aaPredicted RBP20.75■□□□□ 0.91
SHARPIN-204ENST00000530216 TMPOP42166 694 aaKnown RBP20.75■□□□□ 0.91
SHARPIN-204ENST00000530216 EIF5P55010 431 aaKnown RBP20.75■□□□□ 0.91
SHARPIN-204ENST00000530216 THUMPD2Q9BTF0 503 aaKnown RBP20.75■□□□□ 0.91
SHARPIN-204ENST00000530216 USP16Q9Y5T5 823 aa20.75■□□□□ 0.91
SHARPIN-204ENST00000530216 TGFB2P61812 414 aa20.74■□□□□ 0.91
SHARPIN-204ENST00000530216 ADAMTS8Q9UP79 889 aa20.74■□□□□ 0.91
SHARPIN-204ENST00000530216 UTRNP46939 3433 aa20.74■□□□□ 0.91
SHARPIN-204ENST00000530216 WWC3Q9ULE0 1092 aa20.73■□□□□ 0.91
SHARPIN-204ENST00000530216 CHD4Q14839 1912 aa20.72■□□□□ 0.91
SHARPIN-204ENST00000530216 YBX3P16989 372 aaKnown RBP eCLIP20.72■□□□□ 0.91
SHARPIN-204ENST00000530216 TBC1D2BQ9UPU7 963 aa20.72■□□□□ 0.91
SHARPIN-204ENST00000530216 RRP7AQ9Y3A4 280 aaKnown RBP20.72■□□□□ 0.91
SHARPIN-204ENST00000530216 PRAMEF22A3QJZ6 481 aa20.71■□□□□ 0.91
SHARPIN-204ENST00000530216 ANP32CO43423 234 aa20.71■□□□□ 0.91
SHARPIN-204ENST00000530216 TM4SF1P30408 202 aa20.71■□□□□ 0.91
SHARPIN-204ENST00000530216 TSPYL4Q9UJ04 414 aa20.71■□□□□ 0.91
SHARPIN-204ENST00000530216 A0A0G2JLW4 131 aa20.7■□□□□ 0.9
SHARPIN-204ENST00000530216 DDR1Q08345 913 aa20.7■□□□□ 0.9
SHARPIN-204ENST00000530216 NFIXQ14938 502 aa20.7■□□□□ 0.9
SHARPIN-204ENST00000530216 BICDL1Q6ZP65 573 aa20.7■□□□□ 0.9
SHARPIN-204ENST00000530216 POLRMTO00411 1230 aaKnown RBP20.69■□□□□ 0.9
SHARPIN-204ENST00000530216 DZIP3Q86Y13 1208 aaKnown RBP20.69■□□□□ 0.9
SHARPIN-204ENST00000530216 NPHP1O15259 732 aa20.68■□□□□ 0.9
SHARPIN-204ENST00000530216 PIP4K2AP48426 406 aaPredicted RBP20.68■□□□□ 0.9
SHARPIN-204ENST00000530216 C10orf71Q711Q0 1435 aa20.68■□□□□ 0.9
SHARPIN-204ENST00000530216 SERPINB2P05120 415 aa20.67■□□□□ 0.9
SHARPIN-204ENST00000530216 EIF4A1P60842 406 aaKnown RBP20.67■□□□□ 0.9
SHARPIN-204ENST00000530216 BCL2L12Q9HB09 334 aa20.67■□□□□ 0.9
SHARPIN-204ENST00000530216 BABAM1Q9NWV8 329 aa20.67■□□□□ 0.9
SHARPIN-204ENST00000530216 LAS1LQ9Y4W2 734 aaKnown RBP20.67■□□□□ 0.9
SHARPIN-204ENST00000530216 KIF13BQ9NQT8 1826 aa20.67■□□□□ 0.9
SHARPIN-204ENST00000530216 GIGYF1O75420 1035 aaPredicted RBP20.66■□□□□ 0.9
SHARPIN-204ENST00000530216 DPEP1P16444 411 aa20.66■□□□□ 0.9
SHARPIN-204ENST00000530216 SETDB2Q96T68 719 aa20.66■□□□□ 0.9
SHARPIN-204ENST00000530216 BCS1LQ9Y276 419 aa20.66■□□□□ 0.9
SHARPIN-204ENST00000530216 ZNF652Q9Y2D9 606 aa20.66■□□□□ 0.9
SHARPIN-204ENST00000530216 KDM3BQ7LBC6 1761 aa20.65■□□□□ 0.9
SHARPIN-204ENST00000530216 N4BP2Q86UW6 1770 aaPredicted RBP20.65■□□□□ 0.9
SHARPIN-204ENST00000530216 PXDNLA1KZ92 1463 aa20.65■□□□□ 0.9
SHARPIN-204ENST00000530216 TBC1D9BQ66K14 1250 aa20.64■□□□□ 0.89
SHARPIN-204ENST00000530216 NGEFQ8N5V2 710 aa20.64■□□□□ 0.89
SHARPIN-204ENST00000530216 PIM2Q9P1W9 311 aa20.64■□□□□ 0.89
SHARPIN-204ENST00000530216 NBPF26B4DH59 902 aa20.62■□□□□ 0.89
SHARPIN-204ENST00000530216 CAMTA2O94983 1202 aa20.62■□□□□ 0.89
SHARPIN-204ENST00000530216 NBPF10Q6P3W6 841 aaKnown RBP20.62■□□□□ 0.89
SHARPIN-204ENST00000530216 CLEC4GQ6UXB4 293 aa20.62■□□□□ 0.89
SHARPIN-204ENST00000530216 NBPF15Q8N660 670 aa20.62■□□□□ 0.89
SHARPIN-204ENST00000530216 CARMIL3Q8ND23 1372 aa20.61■□□□□ 0.89
SHARPIN-204ENST00000530216 APAF1O14727 1248 aa20.61■□□□□ 0.89
SHARPIN-204ENST00000530216 MYL6BP14649 208 aa20.61■□□□□ 0.89
SHARPIN-204ENST00000530216 DALRD3Q5D0E6 543 aaKnown RBP20.61■□□□□ 0.89
SHARPIN-204ENST00000530216 TRIM35Q9UPQ4 493 aa20.61■□□□□ 0.89
SHARPIN-204ENST00000530216 LAMB4A4D0S4 1761 aa20.61■□□□□ 0.89
SHARPIN-204ENST00000530216 AFDNP55196 1824 aaKnown RBP20.6■□□□□ 0.89
SHARPIN-204ENST00000530216 EIF2S2P20042 333 aaKnown RBP20.6■□□□□ 0.89
SHARPIN-204ENST00000530216 CALD1Q05682 793 aaKnown RBP20.6■□□□□ 0.89
SHARPIN-204ENST00000530216 KIF6Q6ZMV9 814 aa20.6■□□□□ 0.89
SHARPIN-204ENST00000530216 MRS2Q9HD23 443 aa20.6■□□□□ 0.89
SHARPIN-204ENST00000530216 SCN7AQ01118 1682 aa20.6■□□□□ 0.89
SHARPIN-204ENST00000530216 H0YIN7 160 aa20.59■□□□□ 0.89
SHARPIN-204ENST00000530216 CHRNA5P30532 468 aa20.59■□□□□ 0.89
SHARPIN-204ENST00000530216 ARHGAP27Q6ZUM4 889 aa20.59■□□□□ 0.89
SHARPIN-204ENST00000530216 ZNF784Q8NCA9 323 aaPredicted RBP20.59■□□□□ 0.89
SHARPIN-204ENST00000530216 ST5P78524 1137 aa20.58■□□□□ 0.89
SHARPIN-204ENST00000530216 C2CD5Q86YS7 1000 aa20.58■□□□□ 0.89
SHARPIN-204ENST00000530216 CNBD1Q8NA66 436 aa20.58■□□□□ 0.89
SHARPIN-204ENST00000530216 CHL1O00533 1208 aa20.57■□□□□ 0.88
SHARPIN-204ENST00000530216 KCNA3P22001 575 aa20.57■□□□□ 0.88
SHARPIN-204ENST00000530216 PDE6BP35913 854 aa20.57■□□□□ 0.88
SHARPIN-204ENST00000530216 NBPF5PQ86XG9 351 aaPredicted RBP20.57■□□□□ 0.88
SHARPIN-204ENST00000530216 KIAA1551Q9HCM1 1747 aa20.57■□□□□ 0.88
SHARPIN-204ENST00000530216 NIP7Q9Y221 180 aaKnown RBP eCLIP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms