RNA–Protein interactions for RNA: ENST00000530199.5

SVIP-204, Transcript of small VCP interacting protein, humanhuman

TSL 2

Gene SVIP, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-204ENST00000530199 USP17L2Q6R6M4 530 aa11□□□□□ -0.65
SVIP-204ENST00000530199 USP17L1Q7RTZ2 530 aa11□□□□□ -0.65
SVIP-204ENST00000530199 PLEKHM2Q8IWE5 1019 aa11□□□□□ -0.65
SVIP-204ENST00000530199 ADAM32Q8TC27 787 aa11□□□□□ -0.65
SVIP-204ENST00000530199 ARHGAP9Q9BRR9 750 aa11□□□□□ -0.65
SVIP-204ENST00000530199 EID1Q9Y6B2 187 aa11□□□□□ -0.65
SVIP-204ENST00000530199 KDM5AP29375 1690 aaKnown RBP10.99□□□□□ -0.65
SVIP-204ENST00000530199 CARNS1A5YM72 827 aa10.99□□□□□ -0.65
SVIP-204ENST00000530199 BRD1O95696 1058 aa10.99□□□□□ -0.65
SVIP-204ENST00000530199 SH3BP5LQ7L8J4 393 aa10.99□□□□□ -0.65
SVIP-204ENST00000530199 CAMSAP2Q08AD1 1489 aa10.99□□□□□ -0.65
SVIP-204ENST00000530199 TET3O43151 1660 aa10.98□□□□□ -0.65
SVIP-204ENST00000530199 TMEM88BA6NKF7 163 aa10.98□□□□□ -0.65
SVIP-204ENST00000530199 SLFNL1Q499Z3 407 aa10.98□□□□□ -0.65
SVIP-204ENST00000530199 PHTF2Q8N3S3 785 aa10.98□□□□□ -0.65
SVIP-204ENST00000530199 NCOA3Q9Y6Q9 1424 aa10.98□□□□□ -0.65
SVIP-204ENST00000530199 SETD5Q9C0A6 1442 aa10.97□□□□□ -0.65
SVIP-204ENST00000530199 CCDC18Q5T9S5 1454 aa10.96□□□□□ -0.65
SVIP-204ENST00000530199 TMEM2Q9UHN6 1383 aa10.96□□□□□ -0.65
SVIP-204ENST00000530199 PATL2C9JE40 543 aaKnown RBP10.96□□□□□ -0.65
SVIP-204ENST00000530199 ELOAQ14241 798 aaKnown RBP10.96□□□□□ -0.65
SVIP-204ENST00000530199 ZBTB33Q86T24 672 aa10.96□□□□□ -0.65
SVIP-204ENST00000530199 RNF135Q8IUD6 432 aa10.96□□□□□ -0.65
SVIP-204ENST00000530199 DEPDC4Q8N2C3 294 aa10.96□□□□□ -0.65
SVIP-204ENST00000530199 C8orf37Q96NL8 207 aa10.96□□□□□ -0.65
SVIP-204ENST00000530199 KCNA1Q09470 495 aa10.95□□□□□ -0.66
SVIP-204ENST00000530199 BCL9LQ86UU0 1499 aa10.94□□□□□ -0.66
SVIP-204ENST00000530199 MBD5Q9P267 1494 aa10.94□□□□□ -0.66
SVIP-204ENST00000530199 BLMP54132 1417 aaPredicted RBP10.94□□□□□ -0.66
SVIP-204ENST00000530199 SH3RF1Q7Z6J0 888 aa10.94□□□□□ -0.66
SVIP-204ENST00000530199 NKX2-3Q8TAU0 364 aa10.94□□□□□ -0.66
SVIP-204ENST00000530199 GZF1Q9H116 711 aaPredicted RBP10.94□□□□□ -0.66
SVIP-204ENST00000530199 CFDP1Q9UEE9 299 aaPredicted RBP10.94□□□□□ -0.66
SVIP-204ENST00000530199 CHIC2Q9UKJ5 165 aa10.94□□□□□ -0.66
SVIP-204ENST00000530199 ARHGAP35Q9NRY4 1499 aa10.93□□□□□ -0.66
SVIP-204ENST00000530199 S1PR4O95977 384 aa10.93□□□□□ -0.66
SVIP-204ENST00000530199 NCOA4Q13772 614 aa10.93□□□□□ -0.66
SVIP-204ENST00000530199 PLPP7Q8NBV4 271 aa10.93□□□□□ -0.66
SVIP-204ENST00000530199 BAP1Q92560 729 aa10.93□□□□□ -0.66
SVIP-204ENST00000530199 MKRN1Q9UHC7 482 aaKnown RBP10.93□□□□□ -0.66
SVIP-204ENST00000530199 TRPC5Q9UL62 973 aaPredicted RBP10.93□□□□□ -0.66
SVIP-204ENST00000530199 ZMIZ1Q9ULJ6 1067 aa10.93□□□□□ -0.66
SVIP-204ENST00000530199 LZTS3O60299 673 aaPredicted RBP10.92□□□□□ -0.66
SVIP-204ENST00000530199 MAP7D1Q3KQU3 841 aa10.92□□□□□ -0.66
SVIP-204ENST00000530199 DZIP3Q86Y13 1208 aaKnown RBP10.92□□□□□ -0.66
SVIP-204ENST00000530199 CARD14Q9BXL6 1004 aa10.92□□□□□ -0.66
SVIP-204ENST00000530199 FCF1Q9Y324 198 aaKnown RBP10.92□□□□□ -0.66
SVIP-204ENST00000530199 MAGEB6P1A0A0J9YX57 407 aa10.91□□□□□ -0.66
SVIP-204ENST00000530199 FAM196BA6NMK8 535 aa10.91□□□□□ -0.66
SVIP-204ENST00000530199 BPHLQ86WA6 291 aaPredicted RBP10.91□□□□□ -0.66
SVIP-204ENST00000530199 CDAN1Q8IWY9 1227 aa10.91□□□□□ -0.66
SVIP-204ENST00000530199 SLC26A8Q96RN1 970 aa10.91□□□□□ -0.66
SVIP-204ENST00000530199 NOVA2Q9UNW9 492 aaKnown RBP10.91□□□□□ -0.66
SVIP-204ENST00000530199 MROH1Q8NDA8 1641 aa10.91□□□□□ -0.66
SVIP-204ENST00000530199 MAST1Q9Y2H9 1570 aa10.9□□□□□ -0.66
SVIP-204ENST00000530199 ATP5J2-PTCD1G3V325 749 aa10.9□□□□□ -0.66
SVIP-204ENST00000530199 CRTC2Q53ET0 693 aaPredicted RBP10.9□□□□□ -0.66
SVIP-204ENST00000530199 TMEM164Q5U3C3 297 aa10.9□□□□□ -0.66
SVIP-204ENST00000530199 BRINP3Q76B58 766 aa10.9□□□□□ -0.66
SVIP-204ENST00000530199 ZNF511Q8NB15 262 aa10.9□□□□□ -0.66
SVIP-204ENST00000530199 STK32AQ8WU08 396 aa10.9□□□□□ -0.66
SVIP-204ENST00000530199 LRRC59Q96AG4 307 aaKnown RBP10.9□□□□□ -0.66
SVIP-204ENST00000530199 ATRNO75882 1429 aa10.9□□□□□ -0.66
SVIP-204ENST00000530199 USP17L15C9J2P7 530 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 USP17L10C9JJH3 530 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 USP17L13C9JLJ4 530 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 USP17L12C9JPN9 530 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 USP17L11C9JVI0 530 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 USP17L21D6R901 530 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 USP17L18D6R9N7 530 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 USP17L22D6RA61 530 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 USP17L17D6RBQ6 530 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 USP17L19D6RCP7 530 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 USP17L20D6RJB6 530 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 USP17L24Q0WX57 530 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 LINC01559Q495D7 138 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 ERFEQ4G0M1 354 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 TRAF7Q6Q0C0 670 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 FOXJ1Q92949 421 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 C19orf44Q9H6X5 657 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 EEA1Q15075 1411 aa10.89□□□□□ -0.67
SVIP-204ENST00000530199 SENP3-EIF4A1A0A087X0R7 540 aa10.88□□□□□ -0.67
SVIP-204ENST00000530199 RASA1P20936 1047 aa10.88□□□□□ -0.67
SVIP-204ENST00000530199 PTK7Q13308 1070 aa10.88□□□□□ -0.67
SVIP-204ENST00000530199 AGERQ15109 404 aa10.88□□□□□ -0.67
SVIP-204ENST00000530199 TSGA10IPQ3SY00 556 aa10.88□□□□□ -0.67
SVIP-204ENST00000530199 C4orf48Q5BLP8 95 aa10.88□□□□□ -0.67
SVIP-204ENST00000530199 TMCO4Q5TGY1 634 aa10.88□□□□□ -0.67
SVIP-204ENST00000530199 LARP1Q6PKG0 1096 aaKnown RBP10.88□□□□□ -0.67
SVIP-204ENST00000530199 DEFB132Q7Z7B7 95 aa10.88□□□□□ -0.67
SVIP-204ENST00000530199 USP21Q9UK80 565 aa10.88□□□□□ -0.67
SVIP-204ENST00000530199 PNPLA6Q8IY17 1366 aa10.88□□□□□ -0.67
SVIP-204ENST00000530199 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.87□□□□□ -0.67
SVIP-204ENST00000530199 CASKIN1Q8WXD9 1431 aa10.87□□□□□ -0.67
SVIP-204ENST00000530199 CHD2O14647 1828 aaKnown RBP10.87□□□□□ -0.67
SVIP-204ENST00000530199 EML3Q32P44 896 aa10.87□□□□□ -0.67
SVIP-204ENST00000530199 ARHGAP31Q2M1Z3 1444 aa10.86□□□□□ -0.67
SVIP-204ENST00000530199 GIGYF1O75420 1035 aaPredicted RBP10.86□□□□□ -0.67
SVIP-204ENST00000530199 ATF3P18847 181 aa10.86□□□□□ -0.67
SVIP-204ENST00000530199 CCDC85AQ96PX6 553 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms