RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 NOB1Q9ULX3 412 aaKnown RBP18.4■□□□□ 0.54
TTC39A-216ENST00000530004 TNNQ9UQP3 1299 aa18.4■□□□□ 0.54
TTC39A-216ENST00000530004 PRAMEF22A3QJZ6 481 aa18.39■□□□□ 0.53
TTC39A-216ENST00000530004 ATP6V1AP38606 617 aa18.39■□□□□ 0.53
TTC39A-216ENST00000530004 BRPF1P55201 1214 aaPredicted RBP18.39■□□□□ 0.53
TTC39A-216ENST00000530004 MRPL50Q8N5N7 158 aaKnown RBP18.39■□□□□ 0.53
TTC39A-216ENST00000530004 HOXB7P09629 217 aa18.38■□□□□ 0.53
TTC39A-216ENST00000530004 TCERG1O14776 1098 aaKnown RBP18.37■□□□□ 0.53
TTC39A-216ENST00000530004 RLBP1P12271 317 aa18.37■□□□□ 0.53
TTC39A-216ENST00000530004 UPF1Q92900 1129 aaKnown RBP eCLIP18.37■□□□□ 0.53
TTC39A-216ENST00000530004 CLUAP1Q96AJ1 413 aa18.37■□□□□ 0.53
TTC39A-216ENST00000530004 CCNL1Q9UK58 526 aaPredicted RBP18.37■□□□□ 0.53
TTC39A-216ENST00000530004 COG6Q9Y2V7 657 aa18.37■□□□□ 0.53
TTC39A-216ENST00000530004 IPO8O15397 1037 aaKnown RBP18.37■□□□□ 0.53
TTC39A-216ENST00000530004 MS4A1P11836 297 aa18.37■□□□□ 0.53
TTC39A-216ENST00000530004 TRIM27P14373 513 aa18.37■□□□□ 0.53
TTC39A-216ENST00000530004 BAG6P46379 1132 aa18.37■□□□□ 0.53
TTC39A-216ENST00000530004 TXNRD1Q16881 649 aa18.37■□□□□ 0.53
TTC39A-216ENST00000530004 ATF7IPQ6VMQ6 1270 aa18.37■□□□□ 0.53
TTC39A-216ENST00000530004 DNAJC10Q8IXB1 793 aa18.37■□□□□ 0.53
TTC39A-216ENST00000530004 PROM2Q8N271 834 aa18.37■□□□□ 0.53
TTC39A-216ENST00000530004 USP16Q9Y5T5 823 aa18.37■□□□□ 0.53
TTC39A-216ENST00000530004 SOS1Q07889 1333 aaPredicted RBP18.37■□□□□ 0.53
TTC39A-216ENST00000530004 KCNQ4P56696 695 aa18.36■□□□□ 0.53
TTC39A-216ENST00000530004 EN1Q05925 392 aaPredicted RBP18.36■□□□□ 0.53
TTC39A-216ENST00000530004 ITPK1Q13572 414 aa18.36■□□□□ 0.53
TTC39A-216ENST00000530004 SLC27A3Q5K4L6 730 aa18.36■□□□□ 0.53
TTC39A-216ENST00000530004 FTSJ3Q8IY81 847 aaKnown RBP18.36■□□□□ 0.53
TTC39A-216ENST00000530004 DZIP1LQ8IYY4 767 aaKnown RBP18.36■□□□□ 0.53
TTC39A-216ENST00000530004 TEX13AQ9BXU3 409 aaPredicted RBP18.36■□□□□ 0.53
TTC39A-216ENST00000530004 LY75O60449 1722 aa18.35■□□□□ 0.53
TTC39A-216ENST00000530004 CAMKK2Q96RR4 588 aa18.35■□□□□ 0.53
TTC39A-216ENST00000530004 LRRC4BQ9NT99 713 aa18.35■□□□□ 0.53
TTC39A-216ENST00000530004 DEFB132Q7Z7B7 95 aa18.35■□□□□ 0.53
TTC39A-216ENST00000530004 PELP1Q8IZL8 1130 aaKnown RBP18.35■□□□□ 0.53
TTC39A-216ENST00000530004 EIF2S2P20042 333 aaKnown RBP18.34■□□□□ 0.53
TTC39A-216ENST00000530004 EZH2Q15910 746 aaKnown RBP18.33■□□□□ 0.53
TTC39A-216ENST00000530004 HDGFL1Q5TGJ6 251 aa18.33■□□□□ 0.53
TTC39A-216ENST00000530004 ZNF831Q5JPB2 1677 aa18.33■□□□□ 0.52
TTC39A-216ENST00000530004 STARD3NLO95772 234 aa18.32■□□□□ 0.52
TTC39A-216ENST00000530004 CYP19A1P11511 503 aaPredicted RBP18.32■□□□□ 0.52
TTC39A-216ENST00000530004 CICQ96RK0 1608 aaPredicted RBP18.32■□□□□ 0.52
TTC39A-216ENST00000530004 RGPD3A6NKT7 1758 aaPredicted RBP18.32■□□□□ 0.52
TTC39A-216ENST00000530004 C5P01031 1676 aa18.32■□□□□ 0.52
TTC39A-216ENST00000530004 TJP1Q07157 1748 aa18.32■□□□□ 0.52
TTC39A-216ENST00000530004 RGPD4Q7Z3J3 1758 aa18.32■□□□□ 0.52
TTC39A-216ENST00000530004 LINC00116Q8NCU8 138 aa18.32■□□□□ 0.52
TTC39A-216ENST00000530004 ARHGAP45Q92619 1136 aa18.32■□□□□ 0.52
TTC39A-216ENST00000530004 NECTIN2Q92692 538 aa18.32■□□□□ 0.52
TTC39A-216ENST00000530004 MVPQ14764 893 aaKnown RBP18.31■□□□□ 0.52
TTC39A-216ENST00000530004 CHMP4AQ9BY43 222 aa18.31■□□□□ 0.52
TTC39A-216ENST00000530004 CCDC30Q5VVM6 783 aa18.3■□□□□ 0.52
TTC39A-216ENST00000530004 A1BGP04217 495 aa18.3■□□□□ 0.52
TTC39A-216ENST00000530004 CRKLP46109 303 aaKnown RBP18.3■□□□□ 0.52
TTC39A-216ENST00000530004 HMGB2P26583 209 aaKnown RBP18.29■□□□□ 0.52
TTC39A-216ENST00000530004 TMEM57Q8N5G2 664 aa18.29■□□□□ 0.52
TTC39A-216ENST00000530004 ERBB4Q15303 1308 aa18.28■□□□□ 0.52
TTC39A-216ENST00000530004 CNTNAP4Q9C0A0 1308 aa18.28■□□□□ 0.52
TTC39A-216ENST00000530004 ITPRIPQ8IWB1 547 aa18.28■□□□□ 0.52
TTC39A-216ENST00000530004 LAMB4A4D0S4 1761 aa18.28■□□□□ 0.52
TTC39A-216ENST00000530004 SLC4A2P04920 1241 aa18.27■□□□□ 0.52
TTC39A-216ENST00000530004 PDIA6Q15084 440 aa18.27■□□□□ 0.52
TTC39A-216ENST00000530004 RC3H1Q5TC82 1133 aaKnown RBP18.27■□□□□ 0.52
TTC39A-216ENST00000530004 INTS5Q6P9B9 1019 aaKnown RBP18.27■□□□□ 0.52
TTC39A-216ENST00000530004 API5Q9BZZ5 524 aaKnown RBP18.27■□□□□ 0.52
TTC39A-216ENST00000530004 CCDC87Q9NVE4 849 aa18.27■□□□□ 0.52
TTC39A-216ENST00000530004 CHPF2Q9P2E5 772 aa18.27■□□□□ 0.52
TTC39A-216ENST00000530004 DBF4Q9UBU7 674 aaPredicted RBP18.27■□□□□ 0.52
TTC39A-216ENST00000530004 ZBTB1Q9Y2K1 713 aa18.27■□□□□ 0.52
TTC39A-216ENST00000530004 NBPF26B4DH59 902 aa18.27■□□□□ 0.51
TTC39A-216ENST00000530004 PIP4K2AP48426 406 aaPredicted RBP18.27■□□□□ 0.51
TTC39A-216ENST00000530004 AAMPQ13685 434 aa18.27■□□□□ 0.51
TTC39A-216ENST00000530004 NBPF14Q5TI25 921 aa18.27■□□□□ 0.51
TTC39A-216ENST00000530004 NBPF10Q6P3W6 841 aaKnown RBP18.27■□□□□ 0.51
TTC39A-216ENST00000530004 NBPF15Q8N660 670 aa18.27■□□□□ 0.51
TTC39A-216ENST00000530004 STK31Q9BXU1 1019 aa18.27■□□□□ 0.51
TTC39A-216ENST00000530004 DDX21Q9NR30 783 aaKnown RBP eCLIP18.26■□□□□ 0.51
TTC39A-216ENST00000530004 COL5A3P25940 1745 aaPredicted RBP18.26■□□□□ 0.51
TTC39A-216ENST00000530004 ABCC4O15439 1325 aa18.25■□□□□ 0.51
TTC39A-216ENST00000530004 ANXA1P04083 346 aa18.25■□□□□ 0.51
TTC39A-216ENST00000530004 PROSER3Q2NL68 480 aa18.25■□□□□ 0.51
TTC39A-216ENST00000530004 DDX19BQ9UMR2 479 aa18.25■□□□□ 0.51
TTC39A-216ENST00000530004 PTPRCP08575 1304 aa18.25■□□□□ 0.51
TTC39A-216ENST00000530004 LRP10Q7Z4F1 713 aa18.25■□□□□ 0.51
TTC39A-216ENST00000530004 TAF1LQ8IZX4 1826 aa18.24■□□□□ 0.51
TTC39A-216ENST00000530004 MYL6BP14649 208 aa18.24■□□□□ 0.51
TTC39A-216ENST00000530004 AK7Q96M32 723 aa18.24■□□□□ 0.51
TTC39A-216ENST00000530004 C4BP0C0L5 1744 aa18.24■□□□□ 0.51
TTC39A-216ENST00000530004 IL6STP40189 918 aaPredicted RBP18.23■□□□□ 0.51
TTC39A-216ENST00000530004 AKT1S1Q96B36 256 aa18.23■□□□□ 0.51
TTC39A-216ENST00000530004 HYPKQ9NX55 129 aa18.23■□□□□ 0.51
TTC39A-216ENST00000530004 RREB1Q92766 1687 aa18.23■□□□□ 0.51
TTC39A-216ENST00000530004 GNPATO15228 680 aa18.22■□□□□ 0.51
TTC39A-216ENST00000530004 RPS6KA4O75676 772 aa18.22■□□□□ 0.51
TTC39A-216ENST00000530004 ZNF827Q17R98 1081 aa18.22■□□□□ 0.51
TTC39A-216ENST00000530004 G2E3Q7L622 706 aa18.22■□□□□ 0.51
TTC39A-216ENST00000530004 EIF5P55010 431 aaKnown RBP18.22■□□□□ 0.51
TTC39A-216ENST00000530004 MYH14Q7Z406 1995 aaKnown RBP18.21■□□□□ 0.51
TTC39A-216ENST00000530004 KDM2BQ8NHM5 1336 aa18.21■□□□□ 0.51
TTC39A-216ENST00000530004 PHAXQ9H814 394 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms