RNA–Protein interactions for RNA: ENST00000529773.1

CLP1-204, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 4

Gene CLP1, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-204ENST00000529773 TSR2Q969E8 191 aaKnown RBP22.65■■□□□ 1.22
CLP1-204ENST00000529773 PRAMEF22A3QJZ6 481 aa22.64■■□□□ 1.21
CLP1-204ENST00000529773 SLFN5Q08AF3 891 aa22.64■■□□□ 1.21
CLP1-204ENST00000529773 STARD3NLO95772 234 aa22.63■■□□□ 1.21
CLP1-204ENST00000529773 CRKLP46109 303 aaKnown RBP22.63■■□□□ 1.21
CLP1-204ENST00000529773 SLC15A2Q16348 729 aa22.63■■□□□ 1.21
CLP1-204ENST00000529773 KRT24Q2M2I5 525 aa22.63■■□□□ 1.21
CLP1-204ENST00000529773 ERBB4Q15303 1308 aa22.62■■□□□ 1.21
CLP1-204ENST00000529773 NBPF14Q5TI25 921 aa22.62■■□□□ 1.21
CLP1-204ENST00000529773 INTS5Q6P9B9 1019 aaKnown RBP22.62■■□□□ 1.21
CLP1-204ENST00000529773 CCDC87Q9NVE4 849 aa22.62■■□□□ 1.21
CLP1-204ENST00000529773 STK32BQ9NY57 414 aa22.62■■□□□ 1.21
CLP1-204ENST00000529773 USP16Q9Y5T5 823 aa22.62■■□□□ 1.21
CLP1-204ENST00000529773 CASZ1Q86V15 1759 aa22.61■■□□□ 1.21
CLP1-204ENST00000529773 DUSP27Q5VZP5 1158 aa22.6■■□□□ 1.21
CLP1-204ENST00000529773 C8orf58Q8NAV2 365 aa22.6■■□□□ 1.21
CLP1-204ENST00000529773 CDCA7LQ96GN5 454 aa22.6■■□□□ 1.21
CLP1-204ENST00000529773 AK7Q96M32 723 aa22.59■■□□□ 1.21
CLP1-204ENST00000529773 ZBTB1Q9Y2K1 713 aa22.59■■□□□ 1.21
CLP1-204ENST00000529773 C4AP0C0L4 1744 aa22.59■■□□□ 1.21
CLP1-204ENST00000529773 RPS6KA4O75676 772 aa22.58■■□□□ 1.21
CLP1-204ENST00000529773 ADRA2BP18089 450 aa22.58■■□□□ 1.21
CLP1-204ENST00000529773 SSFA2P28290 1259 aa22.58■■□□□ 1.21
CLP1-204ENST00000529773 AMIGO3Q86WK7 504 aa22.58■■□□□ 1.21
CLP1-204ENST00000529773 PNPLA7Q6ZV29 1317 aa22.57■■□□□ 1.2
CLP1-204ENST00000529773 GNPATO15228 680 aa22.57■■□□□ 1.2
CLP1-204ENST00000529773 TSPYL6Q8N831 410 aa22.57■■□□□ 1.2
CLP1-204ENST00000529773 IL6STP40189 918 aaPredicted RBP22.56■■□□□ 1.2
CLP1-204ENST00000529773 NBPF26B4DH59 902 aa22.55■■□□□ 1.2
CLP1-204ENST00000529773 EIF5P55010 431 aaKnown RBP22.55■■□□□ 1.2
CLP1-204ENST00000529773 EXOSC9Q06265 439 aaKnown RBP22.55■■□□□ 1.2
CLP1-204ENST00000529773 TWISTNBQ3B726 338 aaPredicted RBP22.55■■□□□ 1.2
CLP1-204ENST00000529773 NBPF10Q6P3W6 841 aaKnown RBP22.55■■□□□ 1.2
CLP1-204ENST00000529773 NBPF15Q8N660 670 aa22.55■■□□□ 1.2
CLP1-204ENST00000529773 FLAD1Q8NFF5 587 aa22.55■■□□□ 1.2
CLP1-204ENST00000529773 TFCP2L1Q9NZI6 479 aa22.55■■□□□ 1.2
CLP1-204ENST00000529773 RTCBQ9Y3I0 505 aaKnown RBP22.55■■□□□ 1.2
CLP1-204ENST00000529773 COL15A1P39059 1388 aa22.54■■□□□ 1.2
CLP1-204ENST00000529773 A1BGP04217 495 aa22.54■■□□□ 1.2
CLP1-204ENST00000529773 LRP10Q7Z4F1 713 aa22.54■■□□□ 1.2
CLP1-204ENST00000529773 CHMP4AQ9BY43 222 aa22.54■■□□□ 1.2
CLP1-204ENST00000529773 SCN7AQ01118 1682 aa22.53■■□□□ 1.2
CLP1-204ENST00000529773 PDIA6Q15084 440 aa22.53■■□□□ 1.2
CLP1-204ENST00000529773 HDGFL1Q5TGJ6 251 aa22.53■■□□□ 1.2
CLP1-204ENST00000529773 COL24A1Q17RW2 1714 aa22.53■■□□□ 1.2
CLP1-204ENST00000529773 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.52■■□□□ 1.2
CLP1-204ENST00000529773 VAMP4O75379 141 aa22.52■■□□□ 1.2
CLP1-204ENST00000529773 BCORQ6W2J9 1755 aa22.51■■□□□ 1.19
CLP1-204ENST00000529773 CT47B1P0C2W7 299 aaPredicted RBP22.51■■□□□ 1.19
CLP1-204ENST00000529773 R3HDM1Q15032 1099 aaKnown RBP22.51■■□□□ 1.19
CLP1-204ENST00000529773 ELL2O00472 640 aaPredicted RBP22.5■■□□□ 1.19
CLP1-204ENST00000529773 CANXP27824 592 aaKnown RBP22.5■■□□□ 1.19
CLP1-204ENST00000529773 COL23A1Q86Y22 540 aaPredicted RBP22.5■■□□□ 1.19
CLP1-204ENST00000529773 DDX21Q9NR30 783 aaKnown RBP eCLIP22.5■■□□□ 1.19
CLP1-204ENST00000529773 EIF2S2P20042 333 aaKnown RBP22.49■■□□□ 1.19
CLP1-204ENST00000529773 ZNF428Q96B54 188 aa22.49■■□□□ 1.19
CLP1-204ENST00000529773 DBF4Q9UBU7 674 aaPredicted RBP22.49■■□□□ 1.19
CLP1-204ENST00000529773 PROSER3Q2NL68 480 aa22.48■■□□□ 1.19
CLP1-204ENST00000529773 TRAPPC3LQ5T215 181 aa22.48■■□□□ 1.19
CLP1-204ENST00000529773 CCDC30Q5VVM6 783 aa22.48■■□□□ 1.19
CLP1-204ENST00000529773 ARHGEF1Q92888 912 aaKnown RBP22.48■■□□□ 1.19
CLP1-204ENST00000529773 CHPF2Q9P2E5 772 aa22.48■■□□□ 1.19
CLP1-204ENST00000529773 A0A087WZG4 1122 aa22.47■■□□□ 1.19
CLP1-204ENST00000529773 RGL2O15211 777 aa22.47■■□□□ 1.19
CLP1-204ENST00000529773 SLC16A10Q8TF71 515 aa22.47■■□□□ 1.19
CLP1-204ENST00000529773 USP42Q9H9J4 1324 aaKnown RBP22.47■■□□□ 1.19
CLP1-204ENST00000529773 CACNA1FO60840 1977 aa22.47■■□□□ 1.19
CLP1-204ENST00000529773 PSDA5PKW4 1024 aaPredicted RBP22.46■■□□□ 1.19
CLP1-204ENST00000529773 PHF14O94880 888 aa22.46■■□□□ 1.19
CLP1-204ENST00000529773 PIP4K2AP48426 406 aaPredicted RBP22.46■■□□□ 1.19
CLP1-204ENST00000529773 SMIM5Q71RC9 77 aa22.46■■□□□ 1.19
CLP1-204ENST00000529773 PDGFDQ9GZP0 370 aaPredicted RBP22.46■■□□□ 1.19
CLP1-204ENST00000529773 NARFQ9UHQ1 456 aa22.45■■□□□ 1.18
CLP1-204ENST00000529773 NECTIN2Q92692 538 aa22.44■■□□□ 1.18
CLP1-204ENST00000529773 HYPKQ9NX55 129 aa22.44■■□□□ 1.18
CLP1-204ENST00000529773 CAMTA2O94983 1202 aa22.42■■□□□ 1.18
CLP1-204ENST00000529773 ANXA1P04083 346 aa22.42■■□□□ 1.18
CLP1-204ENST00000529773 MYL6BP14649 208 aa22.42■■□□□ 1.18
CLP1-204ENST00000529773 RFC4P35249 363 aa22.42■■□□□ 1.18
CLP1-204ENST00000529773 STK31Q9BXU1 1019 aa22.42■■□□□ 1.18
CLP1-204ENST00000529773 ALDH1L2Q3SY69 923 aa22.41■■□□□ 1.18
CLP1-204ENST00000529773 DZIP3Q86Y13 1208 aaKnown RBP22.41■■□□□ 1.18
CLP1-204ENST00000529773 ERVV-1B6SEH8 477 aa22.4■■□□□ 1.18
CLP1-204ENST00000529773 GYS1P13807 737 aa22.4■■□□□ 1.18
CLP1-204ENST00000529773 YTHDC1Q96MU7 727 aaKnown RBP22.4■■□□□ 1.18
CLP1-204ENST00000529773 MTFR1LQ9H019 292 aa22.4■■□□□ 1.18
CLP1-204ENST00000529773 BCL2L12Q9HB09 334 aa22.4■■□□□ 1.18
CLP1-204ENST00000529773 MAP3K15Q6ZN16 1313 aa22.39■■□□□ 1.18
CLP1-204ENST00000529773 TTLL7Q6ZT98 887 aa22.39■■□□□ 1.17
CLP1-204ENST00000529773 NPM2Q86SE8 214 aaKnown RBP22.39■■□□□ 1.17
CLP1-204ENST00000529773 XAGE3Q8WTP9 111 aa22.39■■□□□ 1.17
CLP1-204ENST00000529773 SRP68Q9UHB9 627 aaKnown RBP22.39■■□□□ 1.17
CLP1-204ENST00000529773 ZNF330Q9Y3S2 320 aaPredicted RBP22.39■■□□□ 1.17
CLP1-204ENST00000529773 LRP5O75197 1615 aa22.39■■□□□ 1.17
CLP1-204ENST00000529773 ZPR1O75312 459 aa22.38■■□□□ 1.17
CLP1-204ENST00000529773 BRPF1P55201 1214 aaPredicted RBP22.38■■□□□ 1.17
CLP1-204ENST00000529773 TBC1D2BQ9UPU7 963 aa22.38■■□□□ 1.17
CLP1-204ENST00000529773 ATP10DQ9P241 1426 aa22.38■■□□□ 1.17
CLP1-204ENST00000529773 ARFGEF2Q9Y6D5 1785 aa22.38■■□□□ 1.17
CLP1-204ENST00000529773 USPL1Q5W0Q7 1092 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms