RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 CACNA1FO60840 1977 aa17.57■□□□□ 0.4
SMCO4-205ENST00000529714 CYP19A1P11511 503 aaPredicted RBP17.56■□□□□ 0.4
SMCO4-205ENST00000529714 CCDC30Q5VVM6 783 aa17.56■□□□□ 0.4
SMCO4-205ENST00000529714 PROM2Q8N271 834 aa17.56■□□□□ 0.4
SMCO4-205ENST00000529714 LRRC4BQ9NT99 713 aa17.56■□□□□ 0.4
SMCO4-205ENST00000529714 C4BP0C0L5 1744 aa17.55■□□□□ 0.4
SMCO4-205ENST00000529714 CNTNAP4Q9C0A0 1308 aa17.55■□□□□ 0.4
SMCO4-205ENST00000529714 EN1Q05925 392 aaPredicted RBP17.55■□□□□ 0.4
SMCO4-205ENST00000529714 ALDH1L2Q3SY69 923 aa17.55■□□□□ 0.4
SMCO4-205ENST00000529714 RC3H1Q5TC82 1133 aaKnown RBP17.54■□□□□ 0.4
SMCO4-205ENST00000529714 LINC00116Q8NCU8 138 aa17.54■□□□□ 0.4
SMCO4-205ENST00000529714 NUP188Q5SRE5 1749 aa17.53■□□□□ 0.4
SMCO4-205ENST00000529714 EIF2S2P20042 333 aaKnown RBP17.53■□□□□ 0.4
SMCO4-205ENST00000529714 EZH2Q15910 746 aaKnown RBP17.53■□□□□ 0.4
SMCO4-205ENST00000529714 CCDC87Q9NVE4 849 aa17.53■□□□□ 0.4
SMCO4-205ENST00000529714 DBF4Q9UBU7 674 aaPredicted RBP17.53■□□□□ 0.4
SMCO4-205ENST00000529714 MYH14Q7Z406 1995 aaKnown RBP17.53■□□□□ 0.4
SMCO4-205ENST00000529714 CRKLP46109 303 aaKnown RBP17.52■□□□□ 0.4
SMCO4-205ENST00000529714 RARSP54136 660 aaKnown RBP17.52■□□□□ 0.4
SMCO4-205ENST00000529714 KCNQ4P56696 695 aa17.52■□□□□ 0.4
SMCO4-205ENST00000529714 DEFB132Q7Z7B7 95 aa17.52■□□□□ 0.4
SMCO4-205ENST00000529714 STK31Q9BXU1 1019 aa17.52■□□□□ 0.4
SMCO4-205ENST00000529714 DDX21Q9NR30 783 aaKnown RBP eCLIP17.52■□□□□ 0.4
SMCO4-205ENST00000529714 BRPF1P55201 1214 aaPredicted RBP17.51■□□□□ 0.39
SMCO4-205ENST00000529714 INTS5Q6P9B9 1019 aaKnown RBP17.51■□□□□ 0.39
SMCO4-205ENST00000529714 A1BGP04217 495 aa17.5■□□□□ 0.39
SMCO4-205ENST00000529714 IL6STP40189 918 aaPredicted RBP17.5■□□□□ 0.39
SMCO4-205ENST00000529714 PDIA6Q15084 440 aa17.5■□□□□ 0.39
SMCO4-205ENST00000529714 SSH1Q8WYL5 1049 aa17.5■□□□□ 0.39
SMCO4-205ENST00000529714 NECTIN2Q92692 538 aa17.5■□□□□ 0.39
SMCO4-205ENST00000529714 HYPKQ9NX55 129 aa17.5■□□□□ 0.39
SMCO4-205ENST00000529714 CHPF2Q9P2E5 772 aa17.5■□□□□ 0.39
SMCO4-205ENST00000529714 RCAN3Q9UKA8 241 aa17.5■□□□□ 0.39
SMCO4-205ENST00000529714 NBPF26B4DH59 902 aa17.49■□□□□ 0.39
SMCO4-205ENST00000529714 NBPF14Q5TI25 921 aa17.49■□□□□ 0.39
SMCO4-205ENST00000529714 NBPF10Q6P3W6 841 aaKnown RBP17.49■□□□□ 0.39
SMCO4-205ENST00000529714 NBPF15Q8N660 670 aa17.49■□□□□ 0.39
SMCO4-205ENST00000529714 ZBTB1Q9Y2K1 713 aa17.49■□□□□ 0.39
SMCO4-205ENST00000529714 UBR3Q6ZT12 1888 aa17.48■□□□□ 0.39
SMCO4-205ENST00000529714 CENPBP07199 599 aaPredicted RBP17.48■□□□□ 0.39
SMCO4-205ENST00000529714 LRP10Q7Z4F1 713 aa17.48■□□□□ 0.39
SMCO4-205ENST00000529714 AK7Q96M32 723 aa17.48■□□□□ 0.39
SMCO4-205ENST00000529714 SMC4Q9NTJ3 1288 aa17.48■□□□□ 0.39
SMCO4-205ENST00000529714 RPS6KA4O75676 772 aa17.47■□□□□ 0.39
SMCO4-205ENST00000529714 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
SMCO4-205ENST00000529714 MRPL50Q8N5N7 158 aaKnown RBP17.47■□□□□ 0.39
SMCO4-205ENST00000529714 QSER1Q2KHR3 1735 aa17.47■□□□□ 0.39
SMCO4-205ENST00000529714 KIF16BQ96L93 1317 aa17.47■□□□□ 0.39
SMCO4-205ENST00000529714 GNPATO15228 680 aa17.46■□□□□ 0.39
SMCO4-205ENST00000529714 CANXP27824 592 aaKnown RBP17.46■□□□□ 0.39
SMCO4-205ENST00000529714 EIF5P55010 431 aaKnown RBP17.46■□□□□ 0.39
SMCO4-205ENST00000529714 PROSER3Q2NL68 480 aa17.46■□□□□ 0.39
SMCO4-205ENST00000529714 AKT1S1Q96B36 256 aa17.46■□□□□ 0.39
SMCO4-205ENST00000529714 RTCBQ9Y3I0 505 aaKnown RBP17.46■□□□□ 0.39
SMCO4-205ENST00000529714 TCERG1O14776 1098 aaKnown RBP17.45■□□□□ 0.38
SMCO4-205ENST00000529714 MYL6BP14649 208 aa17.45■□□□□ 0.38
SMCO4-205ENST00000529714 ADRA2BP18089 450 aa17.45■□□□□ 0.38
SMCO4-205ENST00000529714 COL15A1P39059 1388 aa17.44■□□□□ 0.38
SMCO4-205ENST00000529714 A0A087WZG4 1122 aa17.44■□□□□ 0.38
SMCO4-205ENST00000529714 ANXA1P04083 346 aa17.44■□□□□ 0.38
SMCO4-205ENST00000529714 SSFA2P28290 1259 aa17.44■□□□□ 0.38
SMCO4-205ENST00000529714 PIP4K2AP48426 406 aaPredicted RBP17.44■□□□□ 0.38
SMCO4-205ENST00000529714 NPM2Q86SE8 214 aaKnown RBP17.44■□□□□ 0.38
SMCO4-205ENST00000529714 BCL2L13Q9BXK5 485 aa17.44■□□□□ 0.38
SMCO4-205ENST00000529714 TUBGCP6Q96RT7 1819 aa17.44■□□□□ 0.38
SMCO4-205ENST00000529714 PTPRCP08575 1304 aa17.44■□□□□ 0.38
SMCO4-205ENST00000529714 BCAR3O75815 825 aa17.43■□□□□ 0.38
SMCO4-205ENST00000529714 FLIIQ13045 1269 aa17.43■□□□□ 0.38
SMCO4-205ENST00000529714 ZNF827Q17R98 1081 aa17.43■□□□□ 0.38
SMCO4-205ENST00000529714 STK32BQ9NY57 414 aa17.43■□□□□ 0.38
SMCO4-205ENST00000529714 C4AP0C0L4 1744 aa17.42■□□□□ 0.38
SMCO4-205ENST00000529714 SLC15A2Q16348 729 aa17.42■□□□□ 0.38
SMCO4-205ENST00000529714 COPS6Q7L5N1 327 aa17.42■□□□□ 0.38
SMCO4-205ENST00000529714 FLAD1Q8NFF5 587 aa17.42■□□□□ 0.38
SMCO4-205ENST00000529714 XAGE3Q8WTP9 111 aa17.42■□□□□ 0.38
SMCO4-205ENST00000529714 ARHGAP45Q92619 1136 aa17.42■□□□□ 0.38
SMCO4-205ENST00000529714 PHAXQ9H814 394 aaKnown RBP17.42■□□□□ 0.38
SMCO4-205ENST00000529714 ANO8Q9HCE9 1232 aaPredicted RBP17.42■□□□□ 0.38
SMCO4-205ENST00000529714 RGL2O15211 777 aa17.41■□□□□ 0.38
SMCO4-205ENST00000529714 IPO8O15397 1037 aaKnown RBP17.41■□□□□ 0.38
SMCO4-205ENST00000529714 DDX58O95786 925 aaKnown RBP17.41■□□□□ 0.38
SMCO4-205ENST00000529714 G2E3Q7L622 706 aa17.41■□□□□ 0.38
SMCO4-205ENST00000529714 TFCP2L1Q9NZI6 479 aa17.41■□□□□ 0.38
SMCO4-205ENST00000529714 SCN7AQ01118 1682 aa17.41■□□□□ 0.38
SMCO4-205ENST00000529714 BCORQ6W2J9 1755 aa17.4■□□□□ 0.38
SMCO4-205ENST00000529714 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.4■□□□□ 0.38
SMCO4-205ENST00000529714 TRAPPC3LQ5T215 181 aa17.4■□□□□ 0.38
SMCO4-205ENST00000529714 KIF6Q6ZMV9 814 aa17.4■□□□□ 0.38
SMCO4-205ENST00000529714 ZNF330Q9Y3S2 320 aaPredicted RBP17.4■□□□□ 0.38
SMCO4-205ENST00000529714 ERVV-1B6SEH8 477 aa17.39■□□□□ 0.37
SMCO4-205ENST00000529714 FKBP5Q13451 457 aaPredicted RBP17.39■□□□□ 0.37
SMCO4-205ENST00000529714 TTLL7Q6ZT98 887 aa17.39■□□□□ 0.37
SMCO4-205ENST00000529714 AMIGO3Q86WK7 504 aa17.39■□□□□ 0.37
SMCO4-205ENST00000529714 DZIP3Q86Y13 1208 aaKnown RBP17.39■□□□□ 0.37
SMCO4-205ENST00000529714 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.39■□□□□ 0.37
SMCO4-205ENST00000529714 PLBD2Q8NHP8 589 aa17.39■□□□□ 0.37
SMCO4-205ENST00000529714 NOB1Q9ULX3 412 aaKnown RBP17.39■□□□□ 0.37
SMCO4-205ENST00000529714 MAP3K15Q6ZN16 1313 aa17.39■□□□□ 0.37
SMCO4-205ENST00000529714 ARFGEF2Q9Y6D5 1785 aa17.38■□□□□ 0.37
SMCO4-205ENST00000529714 AIMP1Q12904 312 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms