RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 EPHA4P54764 986 aa8.93□□□□□ -0.98
C11orf88-204ENST00000529661 SEC13P55735 322 aa8.93□□□□□ -0.98
C11orf88-204ENST00000529661 DPYDQ12882 1025 aa8.93□□□□□ -0.98
C11orf88-204ENST00000529661 RUBCNLQ9H714 662 aa8.93□□□□□ -0.98
C11orf88-204ENST00000529661 FAM196BA6NMK8 535 aa8.92□□□□□ -0.98
C11orf88-204ENST00000529661 DKK1O94907 266 aa8.92□□□□□ -0.98
C11orf88-204ENST00000529661 CSB-PGBD3P0DP91 1061 aa8.92□□□□□ -0.98
C11orf88-204ENST00000529661 NBPF1Q3BBV0 1214 aa8.92□□□□□ -0.98
C11orf88-204ENST00000529661 RNFT1Q5M7Z0 435 aa8.92□□□□□ -0.98
C11orf88-204ENST00000529661 ZNF295-AS1Q8N0V1 137 aa8.92□□□□□ -0.98
C11orf88-204ENST00000529661 PGBD3Q8N328 593 aa8.92□□□□□ -0.98
C11orf88-204ENST00000529661 GTPBP3Q969Y2 492 aaKnown RBP8.92□□□□□ -0.98
C11orf88-204ENST00000529661 COL25A1Q9BXS0 654 aaPredicted RBP8.92□□□□□ -0.98
C11orf88-204ENST00000529661 NUCKS1Q9H1E3 243 aaKnown RBP8.92□□□□□ -0.98
C11orf88-204ENST00000529661 GPR25O00155 361 aa8.91□□□□□ -0.98
C11orf88-204ENST00000529661 FOXK2Q01167 660 aa8.91□□□□□ -0.98
C11orf88-204ENST00000529661 FOXR1Q6PIV2 292 aa8.91□□□□□ -0.98
C11orf88-204ENST00000529661 ANKMY2Q8IV38 441 aa8.91□□□□□ -0.98
C11orf88-204ENST00000529661 GMCL1Q96IK5 515 aa8.91□□□□□ -0.98
C11orf88-204ENST00000529661 CNTNAP3BQ96NU0 1288 aa8.91□□□□□ -0.98
C11orf88-204ENST00000529661 CNTNAP3Q9BZ76 1288 aa8.91□□□□□ -0.98
C11orf88-204ENST00000529661 TSPAN10Q9H1Z9 355 aaPredicted RBP8.91□□□□□ -0.98
C11orf88-204ENST00000529661 SERPINA10Q9UK55 444 aa8.91□□□□□ -0.98
C11orf88-204ENST00000529661 ZNF232Q9UNY5 417 aa8.91□□□□□ -0.98
C11orf88-204ENST00000529661 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.9□□□□□ -0.98
C11orf88-204ENST00000529661 M0R2N6 131 aa8.9□□□□□ -0.98
C11orf88-204ENST00000529661 LGR5O75473 907 aa8.9□□□□□ -0.98
C11orf88-204ENST00000529661 HINFPQ9BQA5 517 aa8.9□□□□□ -0.98
C11orf88-204ENST00000529661 ATP4AP20648 1035 aa8.89□□□□□ -0.99
C11orf88-204ENST00000529661 CCDC82Q8N4S0 544 aa8.89□□□□□ -0.99
C11orf88-204ENST00000529661 ZDHHC1Q8WTX9 485 aa8.89□□□□□ -0.99
C11orf88-204ENST00000529661 L3MBTL2Q969R5 705 aa8.89□□□□□ -0.99
C11orf88-204ENST00000529661 TATP17735 454 aaPredicted RBP8.88□□□□□ -0.99
C11orf88-204ENST00000529661 ARSJQ5FYB0 599 aaPredicted RBP8.88□□□□□ -0.99
C11orf88-204ENST00000529661 EFHC2Q5JST6 749 aa8.88□□□□□ -0.99
C11orf88-204ENST00000529661 TRERF1Q96PN7 1200 aa8.88□□□□□ -0.99
C11orf88-204ENST00000529661 SERTM1A2A2V5 107 aa8.87□□□□□ -0.99
C11orf88-204ENST00000529661 PPP1R12BO60237 982 aaPredicted RBP8.87□□□□□ -0.99
C11orf88-204ENST00000529661 THBS1P07996 1170 aa8.87□□□□□ -0.99
C11orf88-204ENST00000529661 NOS2P35228 1153 aa8.87□□□□□ -0.99
C11orf88-204ENST00000529661 PSMA6P60900 246 aaKnown RBP8.87□□□□□ -0.99
C11orf88-204ENST00000529661 TEAD4Q15561 434 aa8.87□□□□□ -0.99
C11orf88-204ENST00000529661 C1orf216Q8TAB5 229 aa8.87□□□□□ -0.99
C11orf88-204ENST00000529661 C1orf115Q9H7X2 142 aa8.87□□□□□ -0.99
C11orf88-204ENST00000529661 CHMP3Q9Y3E7 222 aa8.87□□□□□ -0.99
C11orf88-204ENST00000529661 TXLNAP40222 546 aa8.86□□□□□ -0.99
C11orf88-204ENST00000529661 GAS6Q14393 721 aa8.86□□□□□ -0.99
C11orf88-204ENST00000529661 SH3PXD2AQ5TCZ1 1133 aa8.86□□□□□ -0.99
C11orf88-204ENST00000529661 BICDL1Q6ZP65 573 aa8.86□□□□□ -0.99
C11orf88-204ENST00000529661 FAM200AQ8TCP9 573 aa8.86□□□□□ -0.99
C11orf88-204ENST00000529661 CHMP7Q8WUX9 453 aaPredicted RBP8.86□□□□□ -0.99
C11orf88-204ENST00000529661 SCG3Q8WXD2 468 aaKnown RBP8.86□□□□□ -0.99
C11orf88-204ENST00000529661 NOVA2Q9UNW9 492 aaKnown RBP8.86□□□□□ -0.99
C11orf88-204ENST00000529661 LBRQ14739 615 aaKnown RBP8.85□□□□□ -0.99
C11orf88-204ENST00000529661 CRISPLD1Q9H336 500 aa8.85□□□□□ -0.99
C11orf88-204ENST00000529661 ZDHHC3Q9NYG2 299 aa8.85□□□□□ -0.99
C11orf88-204ENST00000529661 A0A1W2PNR3 127 aa8.84□□□□□ -0.99
C11orf88-204ENST00000529661 FAM181BA6NEQ2 426 aa8.84□□□□□ -0.99
C11orf88-204ENST00000529661 EML1O00423 815 aa8.84□□□□□ -0.99
C11orf88-204ENST00000529661 C21orf2O43822 256 aa8.84□□□□□ -0.99
C11orf88-204ENST00000529661 PBXIP1Q96AQ6 731 aa8.84□□□□□ -0.99
C11orf88-204ENST00000529661 HCN4Q9Y3Q4 1203 aa8.84□□□□□ -0.99
C11orf88-204ENST00000529661 GJA3Q9Y6H8 435 aa8.84□□□□□ -0.99
C11orf88-204ENST00000529661 ATAD2Q6PL18 1390 aa8.84□□□□□ -0.99
C11orf88-204ENST00000529661 GAS2L2Q8NHY3 880 aa8.83□□□□□ -1
C11orf88-204ENST00000529661 SLURP2P0DP57 97 aa8.82□□□□□ -1
C11orf88-204ENST00000529661 SRPK2P78362 688 aaKnown RBP8.82□□□□□ -1
C11orf88-204ENST00000529661 STK32AQ8WU08 396 aa8.82□□□□□ -1
C11orf88-204ENST00000529661 ABHD17AQ96GS6 310 aa8.82□□□□□ -1
C11orf88-204ENST00000529661 ZIC5Q96T25 663 aa8.82□□□□□ -1
C11orf88-204ENST00000529661 PHF24Q9UPV7 400 aa8.82□□□□□ -1
C11orf88-204ENST00000529661 MX2P20592 715 aa8.81□□□□□ -1
C11orf88-204ENST00000529661 UBAP2LQ14157 1087 aaKnown RBP8.81□□□□□ -1
C11orf88-204ENST00000529661 ZNF385CQ66K41 422 aaPredicted RBP8.81□□□□□ -1
C11orf88-204ENST00000529661 FIGNL1Q6PIW4 674 aa8.81□□□□□ -1
C11orf88-204ENST00000529661 NLRP8Q86W28 1048 aa8.81□□□□□ -1
C11orf88-204ENST00000529661 HOMEZQ8IX15 550 aa8.81□□□□□ -1
C11orf88-204ENST00000529661 RHPN1Q8TCX5 695 aa8.81□□□□□ -1
C11orf88-204ENST00000529661 WHAMMQ8TF30 809 aa8.81□□□□□ -1
C11orf88-204ENST00000529661 ZCCHC2Q9C0B9 1178 aaKnown RBP8.81□□□□□ -1
C11orf88-204ENST00000529661 MBIPQ9NS73 344 aa8.81□□□□□ -1
C11orf88-204ENST00000529661 ZMIZ1Q9ULJ6 1067 aa8.81□□□□□ -1
C11orf88-204ENST00000529661 ATG7O95352 703 aa8.8□□□□□ -1
C11orf88-204ENST00000529661 ADAMTS2O95450 1211 aa8.8□□□□□ -1
C11orf88-204ENST00000529661 NGLY1Q96IV0 654 aa8.8□□□□□ -1
C11orf88-204ENST00000529661 C2orf49Q9BVC5 232 aaPredicted RBP8.8□□□□□ -1
C11orf88-204ENST00000529661 CFHR5Q9BXR6 569 aa8.8□□□□□ -1
C11orf88-204ENST00000529661 PHACTR1Q9C0D0 580 aa8.8□□□□□ -1
C11orf88-204ENST00000529661 NEUROD4Q9HD90 331 aa8.8□□□□□ -1
C11orf88-204ENST00000529661 IGF1RP08069 1367 aa8.79□□□□□ -1
C11orf88-204ENST00000529661 DCDC2BA2VCK2 349 aa8.79□□□□□ -1
C11orf88-204ENST00000529661 ATXN7O15265 892 aaPredicted RBP8.79□□□□□ -1
C11orf88-204ENST00000529661 BNIP3LO60238 219 aa8.79□□□□□ -1
C11orf88-204ENST00000529661 IGFBP4P22692 258 aa8.79□□□□□ -1
C11orf88-204ENST00000529661 HIRAP54198 1017 aaPredicted RBP8.79□□□□□ -1
C11orf88-204ENST00000529661 LRRC69Q6ZNQ3 347 aa8.79□□□□□ -1
C11orf88-204ENST00000529661 ATXN7L1Q9ULK2 861 aaPredicted RBP8.79□□□□□ -1
C11orf88-204ENST00000529661 PCDHGC4Q9Y5F7 938 aa8.79□□□□□ -1
C11orf88-204ENST00000529661 SRSF11Q05519 484 aaKnown RBP8.78□□□□□ -1
C11orf88-204ENST00000529661 ELOAQ14241 798 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms