RNA–Protein interactions for RNA: ENST00000529389.5

RELA-215, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 3

Gene RELA, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-215ENST00000529389 PELP1Q8IZL8 1130 aaKnown RBP23.15■■□□□ 1.3
RELA-215ENST00000529389 NPM2Q86SE8 214 aaKnown RBP23.14■■□□□ 1.29
RELA-215ENST00000529389 PNISRQ8TF01 805 aaKnown RBP23.14■■□□□ 1.29
RELA-215ENST00000529389 SRP68Q9UHB9 627 aaKnown RBP23.14■■□□□ 1.29
RELA-215ENST00000529389 PARP3Q9Y6F1 533 aa23.14■■□□□ 1.29
RELA-215ENST00000529389 USP42Q9H9J4 1324 aaKnown RBP23.13■■□□□ 1.29
RELA-215ENST00000529389 SIPA1L3O60292 1781 aaPredicted RBP23.12■■□□□ 1.29
RELA-215ENST00000529389 UBR2Q8IWV8 1755 aa23.12■■□□□ 1.29
RELA-215ENST00000529389 A0A087WZG4 1122 aa23.11■■□□□ 1.29
RELA-215ENST00000529389 SNRPA1P09661 255 aaKnown RBP23.11■■□□□ 1.29
RELA-215ENST00000529389 YY1P25490 414 aa23.11■■□□□ 1.29
RELA-215ENST00000529389 RIPK4P57078 832 aa23.11■■□□□ 1.29
RELA-215ENST00000529389 NARFQ9UHQ1 456 aa23.11■■□□□ 1.29
RELA-215ENST00000529389 COL15A1P39059 1388 aa23.11■■□□□ 1.29
RELA-215ENST00000529389 USPL1Q5W0Q7 1092 aa23.1■■□□□ 1.29
RELA-215ENST00000529389 LMOD3Q0VAK6 560 aa23.09■■□□□ 1.29
RELA-215ENST00000529389 FKBP8Q14318 412 aa23.09■■□□□ 1.29
RELA-215ENST00000529389 MIS18AQ9NYP9 233 aa23.09■■□□□ 1.29
RELA-215ENST00000529389 TMPOP42166 694 aaKnown RBP23.08■■□□□ 1.29
RELA-215ENST00000529389 EIF5P55010 431 aaKnown RBP23.08■■□□□ 1.29
RELA-215ENST00000529389 CCDC146Q8IYE0 955 aa23.08■■□□□ 1.29
RELA-215ENST00000529389 RUNDC1Q96C34 613 aa23.08■■□□□ 1.29
RELA-215ENST00000529389 ADAMTS8Q9UP79 889 aa23.08■■□□□ 1.29
RELA-215ENST00000529389 ZNF330Q9Y3S2 320 aaPredicted RBP23.08■■□□□ 1.29
RELA-215ENST00000529389 GRIN3BO60391 1043 aa23.07■■□□□ 1.28
RELA-215ENST00000529389 A1BGP04217 495 aa23.07■■□□□ 1.28
RELA-215ENST00000529389 IL6STP40189 918 aaPredicted RBP23.07■■□□□ 1.28
RELA-215ENST00000529389 THUMPD2Q9BTF0 503 aaKnown RBP23.07■■□□□ 1.28
RELA-215ENST00000529389 USP16Q9Y5T5 823 aa23.07■■□□□ 1.28
RELA-215ENST00000529389 NEUROD2Q15784 382 aa23.05■■□□□ 1.28
RELA-215ENST00000529389 C4AP0C0L4 1744 aa23.05■■□□□ 1.28
RELA-215ENST00000529389 TGFB2P61812 414 aa23.04■■□□□ 1.28
RELA-215ENST00000529389 PRAMEF22A3QJZ6 481 aa23.03■■□□□ 1.28
RELA-215ENST00000529389 TM4SF1P30408 202 aa23.03■■□□□ 1.28
RELA-215ENST00000529389 RRP7AQ9Y3A4 280 aaKnown RBP23.03■■□□□ 1.28
RELA-215ENST00000529389 DLG5Q8TDM6 1919 aa23.02■■□□□ 1.28
RELA-215ENST00000529389 ANP32CO43423 234 aa23.02■■□□□ 1.28
RELA-215ENST00000529389 TSPYL4Q9UJ04 414 aa23.02■■□□□ 1.28
RELA-215ENST00000529389 TBC1D2BQ9UPU7 963 aa23.02■■□□□ 1.28
RELA-215ENST00000529389 YBX3P16989 372 aaKnown RBP eCLIP23.01■■□□□ 1.274e-7■■■■□ 22.3
RELA-215ENST00000529389 DDR1Q08345 913 aa23.01■■□□□ 1.27
RELA-215ENST00000529389 POLRMTO00411 1230 aaKnown RBP23■■□□□ 1.27
RELA-215ENST00000529389 EIF4A1P60842 406 aaKnown RBP23■■□□□ 1.27
RELA-215ENST00000529389 NFIXQ14938 502 aa23■■□□□ 1.27
RELA-215ENST00000529389 BCL2L12Q9HB09 334 aa23■■□□□ 1.27
RELA-215ENST00000529389 BABAM1Q9NWV8 329 aa23■■□□□ 1.27
RELA-215ENST00000529389 C10orf71Q711Q0 1435 aa22.99■■□□□ 1.27
RELA-215ENST00000529389 GIGYF1O75420 1035 aaPredicted RBP22.99■■□□□ 1.27
RELA-215ENST00000529389 DZIP3Q86Y13 1208 aaKnown RBP22.98■■□□□ 1.27
RELA-215ENST00000529389 WWC3Q9ULE0 1092 aa22.98■■□□□ 1.27
RELA-215ENST00000529389 A0A0G2JLW4 131 aa22.97■■□□□ 1.27
RELA-215ENST00000529389 PIP4K2AP48426 406 aaPredicted RBP22.97■■□□□ 1.27
RELA-215ENST00000529389 BICDL1Q6ZP65 573 aa22.97■■□□□ 1.27
RELA-215ENST00000529389 UTRNP46939 3433 aa22.96■■□□□ 1.27
RELA-215ENST00000529389 SERPINB2P05120 415 aa22.96■■□□□ 1.27
RELA-215ENST00000529389 DPEP1P16444 411 aa22.95■■□□□ 1.26
RELA-215ENST00000529389 PXDNLA1KZ92 1463 aa22.94■■□□□ 1.26
RELA-215ENST00000529389 CAMTA2O94983 1202 aa22.94■■□□□ 1.26
RELA-215ENST00000529389 TBC1D9BQ66K14 1250 aa22.94■■□□□ 1.26
RELA-215ENST00000529389 TRIM35Q9UPQ4 493 aa22.94■■□□□ 1.26
RELA-215ENST00000529389 NBPF26B4DH59 902 aa22.93■■□□□ 1.26
RELA-215ENST00000529389 NBPF10Q6P3W6 841 aaKnown RBP22.93■■□□□ 1.26
RELA-215ENST00000529389 NBPF15Q8N660 670 aa22.93■■□□□ 1.26
RELA-215ENST00000529389 SETDB2Q96T68 719 aa22.93■■□□□ 1.26
RELA-215ENST00000529389 BCS1LQ9Y276 419 aa22.93■■□□□ 1.26
RELA-215ENST00000529389 ZNF652Q9Y2D9 606 aa22.93■■□□□ 1.26
RELA-215ENST00000529389 LAS1LQ9Y4W2 734 aaKnown RBP22.93■■□□□ 1.26
RELA-215ENST00000529389 APAF1O14727 1248 aa22.92■■□□□ 1.26
RELA-215ENST00000529389 CLEC4GQ6UXB4 293 aa22.92■■□□□ 1.26
RELA-215ENST00000529389 PIM2Q9P1W9 311 aa22.92■■□□□ 1.26
RELA-215ENST00000529389 GOLGB1Q14789 3259 aaKnown RBP22.92■■□□□ 1.26
RELA-215ENST00000529389 KDM3BQ7LBC6 1761 aa22.91■■□□□ 1.26
RELA-215ENST00000529389 KIF13BQ9NQT8 1826 aa22.91■■□□□ 1.26
RELA-215ENST00000529389 CHL1O00533 1208 aa22.9■■□□□ 1.26
RELA-215ENST00000529389 NPHP1O15259 732 aa22.9■■□□□ 1.26
RELA-215ENST00000529389 CCDC184Q52MB2 194 aa22.9■■□□□ 1.26
RELA-215ENST00000529389 MRS2Q9HD23 443 aa22.9■■□□□ 1.26
RELA-215ENST00000529389 CHD4Q14839 1912 aa22.9■■□□□ 1.26
RELA-215ENST00000529389 CARMIL3Q8ND23 1372 aa22.89■■□□□ 1.26
RELA-215ENST00000529389 NGEFQ8N5V2 710 aa22.89■■□□□ 1.25
RELA-215ENST00000529389 ERBB4Q15303 1308 aa22.88■■□□□ 1.25
RELA-215ENST00000529389 RGL2O15211 777 aa22.88■■□□□ 1.25
RELA-215ENST00000529389 EIF2S2P20042 333 aaKnown RBP22.88■■□□□ 1.25
RELA-215ENST00000529389 KCNA3P22001 575 aa22.88■■□□□ 1.25
RELA-215ENST00000529389 CALD1Q05682 793 aaKnown RBP22.88■■□□□ 1.25
RELA-215ENST00000529389 MYL6BP14649 208 aa22.87■■□□□ 1.25
RELA-215ENST00000529389 CHRNA5P30532 468 aa22.87■■□□□ 1.25
RELA-215ENST00000529389 DALRD3Q5D0E6 543 aaKnown RBP22.87■■□□□ 1.25
RELA-215ENST00000529389 KIF6Q6ZMV9 814 aa22.86■■□□□ 1.25
RELA-215ENST00000529389 ZNF784Q8NCA9 323 aaPredicted RBP22.86■■□□□ 1.25
RELA-215ENST00000529389 CFAP44Q96MT7 982 aa22.86■■□□□ 1.25
RELA-215ENST00000529389 SCN7AQ01118 1682 aa22.85■■□□□ 1.25
RELA-215ENST00000529389 H0YIN7 160 aa22.85■■□□□ 1.25
RELA-215ENST00000529389 CNBD1Q8NA66 436 aa22.85■■□□□ 1.25
RELA-215ENST00000529389 PDZRN3Q9UPQ7 1066 aa22.85■■□□□ 1.25
RELA-215ENST00000529389 N4BP2Q86UW6 1770 aaPredicted RBP22.85■■□□□ 1.25
RELA-215ENST00000529389 LAMB4A4D0S4 1761 aa22.84■■□□□ 1.25
RELA-215ENST00000529389 ERVV-1B6SEH8 477 aa22.84■■□□□ 1.25
RELA-215ENST00000529389 ST5P78524 1137 aa22.84■■□□□ 1.25
RELA-215ENST00000529389 PRR5LQ6MZQ0 368 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms