RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 CT47B1P0C2W7 299 aaPredicted RBP14.76□□□□□ -0.05
CAPN1-217ENST00000529133 EIF2S2P20042 333 aaKnown RBP14.76□□□□□ -0.05
CAPN1-217ENST00000529133 HDGFL1Q5TGJ6 251 aa14.76□□□□□ -0.05
CAPN1-217ENST00000529133 CNTNAP4Q9C0A0 1308 aa14.75□□□□□ -0.05
CAPN1-217ENST00000529133 NECTIN2Q92692 538 aa14.75□□□□□ -0.05
CAPN1-217ENST00000529133 C4BP0C0L5 1744 aa14.75□□□□□ -0.05
CAPN1-217ENST00000529133 NUP188Q5SRE5 1749 aa14.75□□□□□ -0.05
CAPN1-217ENST00000529133 ERBB4Q15303 1308 aa14.74□□□□□ -0.05
CAPN1-217ENST00000529133 A1BGP04217 495 aa14.74□□□□□ -0.05
CAPN1-217ENST00000529133 CRKLP46109 303 aaKnown RBP14.74□□□□□ -0.05
CAPN1-217ENST00000529133 INTS5Q6P9B9 1019 aaKnown RBP14.74□□□□□ -0.05
CAPN1-217ENST00000529133 CCDC87Q9NVE4 849 aa14.74□□□□□ -0.05
CAPN1-217ENST00000529133 TAF1LQ8IZX4 1826 aa14.73□□□□□ -0.05
CAPN1-217ENST00000529133 NBPF26B4DH59 902 aa14.73□□□□□ -0.05
CAPN1-217ENST00000529133 TCERG1O14776 1098 aaKnown RBP14.73□□□□□ -0.05
CAPN1-217ENST00000529133 NBPF14Q5TI25 921 aa14.73□□□□□ -0.05
CAPN1-217ENST00000529133 CCDC30Q5VVM6 783 aa14.73□□□□□ -0.05
CAPN1-217ENST00000529133 NBPF10Q6P3W6 841 aaKnown RBP14.73□□□□□ -0.05
CAPN1-217ENST00000529133 NBPF15Q8N660 670 aa14.73□□□□□ -0.05
CAPN1-217ENST00000529133 ZNF428Q96B54 188 aa14.73□□□□□ -0.05
CAPN1-217ENST00000529133 CHPF2Q9P2E5 772 aa14.73□□□□□ -0.05
CAPN1-217ENST00000529133 ZBTB1Q9Y2K1 713 aa14.73□□□□□ -0.05
CAPN1-217ENST00000529133 HMGB2P26583 209 aaKnown RBP14.72□□□□□ -0.05
CAPN1-217ENST00000529133 PIP4K2AP48426 406 aaPredicted RBP14.72□□□□□ -0.05
CAPN1-217ENST00000529133 PDIA6Q15084 440 aa14.72□□□□□ -0.05
CAPN1-217ENST00000529133 PROSER3Q2NL68 480 aa14.72□□□□□ -0.05
CAPN1-217ENST00000529133 RC3H1Q5TC82 1133 aaKnown RBP14.72□□□□□ -0.05
CAPN1-217ENST00000529133 CHMP4AQ9BY43 222 aa14.72□□□□□ -0.05
CAPN1-217ENST00000529133 ANXA1P04083 346 aa14.71□□□□□ -0.05
CAPN1-217ENST00000529133 CANXP27824 592 aaKnown RBP14.71□□□□□ -0.05
CAPN1-217ENST00000529133 RARSP54136 660 aaKnown RBP14.71□□□□□ -0.05
CAPN1-217ENST00000529133 ZNF827Q17R98 1081 aa14.71□□□□□ -0.05
CAPN1-217ENST00000529133 SSH1Q8WYL5 1049 aa14.71□□□□□ -0.05
CAPN1-217ENST00000529133 AKT1S1Q96B36 256 aa14.71□□□□□ -0.05
CAPN1-217ENST00000529133 AK7Q96M32 723 aa14.71□□□□□ -0.05
CAPN1-217ENST00000529133 STK31Q9BXU1 1019 aa14.71□□□□□ -0.05
CAPN1-217ENST00000529133 DDX21Q9NR30 783 aaKnown RBP eCLIP14.71□□□□□ -0.05
CAPN1-217ENST00000529133 DBF4Q9UBU7 674 aaPredicted RBP14.71□□□□□ -0.05
CAPN1-217ENST00000529133 EP400Q96L91 3159 aa14.71□□□□□ -0.05
CAPN1-217ENST00000529133 GNPATO15228 680 aa14.7□□□□□ -0.06
CAPN1-217ENST00000529133 ALDH1L2Q3SY69 923 aa14.7□□□□□ -0.06
CAPN1-217ENST00000529133 LRP10Q7Z4F1 713 aa14.7□□□□□ -0.06
CAPN1-217ENST00000529133 BCL2L13Q9BXK5 485 aa14.7□□□□□ -0.06
CAPN1-217ENST00000529133 ANO8Q9HCE9 1232 aaPredicted RBP14.7□□□□□ -0.06
CAPN1-217ENST00000529133 RPS6KA4O75676 772 aa14.69□□□□□ -0.06
CAPN1-217ENST00000529133 MYL6BP14649 208 aa14.69□□□□□ -0.06
CAPN1-217ENST00000529133 IL6STP40189 918 aaPredicted RBP14.69□□□□□ -0.06
CAPN1-217ENST00000529133 AMIGO3Q86WK7 504 aa14.69□□□□□ -0.06
CAPN1-217ENST00000529133 MRPL50Q8N5N7 158 aaKnown RBP14.69□□□□□ -0.06
CAPN1-217ENST00000529133 SMC4Q9NTJ3 1288 aa14.69□□□□□ -0.06
CAPN1-217ENST00000529133 RCAN3Q9UKA8 241 aa14.69□□□□□ -0.06
CAPN1-217ENST00000529133 SLC4A2P04920 1241 aa14.68□□□□□ -0.06
CAPN1-217ENST00000529133 EIF5P55010 431 aaKnown RBP14.68□□□□□ -0.06
CAPN1-217ENST00000529133 HYPKQ9NX55 129 aa14.68□□□□□ -0.06
CAPN1-217ENST00000529133 STK32BQ9NY57 414 aa14.68□□□□□ -0.06
CAPN1-217ENST00000529133 MYH14Q7Z406 1995 aaKnown RBP14.67□□□□□ -0.06
CAPN1-217ENST00000529133 SMIM5Q71RC9 77 aa14.67□□□□□ -0.06
CAPN1-217ENST00000529133 G2E3Q7L622 706 aa14.67□□□□□ -0.06
CAPN1-217ENST00000529133 RTCBQ9Y3I0 505 aaKnown RBP14.67□□□□□ -0.06
CAPN1-217ENST00000529133 ZNF330Q9Y3S2 320 aaPredicted RBP14.67□□□□□ -0.06
CAPN1-217ENST00000529133 COL15A1P39059 1388 aa14.67□□□□□ -0.06
CAPN1-217ENST00000529133 BCAR3O75815 825 aa14.66□□□□□ -0.06
CAPN1-217ENST00000529133 SLC15A2Q16348 729 aa14.66□□□□□ -0.06
CAPN1-217ENST00000529133 XAGE3Q8WTP9 111 aa14.66□□□□□ -0.06
CAPN1-217ENST00000529133 PHAXQ9H814 394 aaKnown RBP14.66□□□□□ -0.06
CAPN1-217ENST00000529133 UBR3Q6ZT12 1888 aa14.65□□□□□ -0.06
CAPN1-217ENST00000529133 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.65□□□□□ -0.06
CAPN1-217ENST00000529133 PHF14O94880 888 aa14.65□□□□□ -0.06
CAPN1-217ENST00000529133 ADRA2BP18089 450 aa14.65□□□□□ -0.06
CAPN1-217ENST00000529133 SSFA2P28290 1259 aa14.65□□□□□ -0.06
CAPN1-217ENST00000529133 BRPF1P55201 1214 aaPredicted RBP14.65□□□□□ -0.06
CAPN1-217ENST00000529133 COPS6Q7L5N1 327 aa14.65□□□□□ -0.06
CAPN1-217ENST00000529133 TFCP2L1Q9NZI6 479 aa14.65□□□□□ -0.06
CAPN1-217ENST00000529133 TUBGCP6Q96RT7 1819 aa14.64□□□□□ -0.07
CAPN1-217ENST00000529133 SOCS7O14512 581 aa14.64□□□□□ -0.07
CAPN1-217ENST00000529133 FLIIQ13045 1269 aa14.64□□□□□ -0.07
CAPN1-217ENST00000529133 TTLL7Q6ZT98 887 aa14.64□□□□□ -0.07
CAPN1-217ENST00000529133 PNPLA7Q6ZV29 1317 aa14.64□□□□□ -0.07
CAPN1-217ENST00000529133 KIF16BQ96L93 1317 aa14.64□□□□□ -0.07
CAPN1-217ENST00000529133 A0A087WZG4 1122 aa14.63□□□□□ -0.07
CAPN1-217ENST00000529133 AIMP1Q12904 312 aaKnown RBP14.63□□□□□ -0.07
CAPN1-217ENST00000529133 TRAPPC3LQ5T215 181 aa14.63□□□□□ -0.07
CAPN1-217ENST00000529133 NPM2Q86SE8 214 aaKnown RBP14.63□□□□□ -0.07
CAPN1-217ENST00000529133 DZIP3Q86Y13 1208 aaKnown RBP14.63□□□□□ -0.07
CAPN1-217ENST00000529133 ARHGEF1Q92888 912 aaKnown RBP14.63□□□□□ -0.07
CAPN1-217ENST00000529133 C4AP0C0L4 1744 aa14.63□□□□□ -0.07
CAPN1-217ENST00000529133 CENPBP07199 599 aaPredicted RBP14.62□□□□□ -0.07
CAPN1-217ENST00000529133 QSER1Q2KHR3 1735 aa14.62□□□□□ -0.07
CAPN1-217ENST00000529133 KIF6Q6ZMV9 814 aa14.62□□□□□ -0.07
CAPN1-217ENST00000529133 COL23A1Q86Y22 540 aaPredicted RBP14.62□□□□□ -0.07
CAPN1-217ENST00000529133 NOB1Q9ULX3 412 aaKnown RBP14.62□□□□□ -0.07
CAPN1-217ENST00000529133 TBC1D2BQ9UPU7 963 aa14.62□□□□□ -0.07
CAPN1-217ENST00000529133 PTPRCP08575 1304 aa14.62□□□□□ -0.07
CAPN1-217ENST00000529133 MAP3K15Q6ZN16 1313 aa14.62□□□□□ -0.07
CAPN1-217ENST00000529133 SCN7AQ01118 1682 aa14.61□□□□□ -0.07
CAPN1-217ENST00000529133 ADCY9O60503 1353 aa14.61□□□□□ -0.07
CAPN1-217ENST00000529133 CAMTA2O94983 1202 aa14.61□□□□□ -0.07
CAPN1-217ENST00000529133 FKBP5Q13451 457 aaPredicted RBP14.61□□□□□ -0.07
CAPN1-217ENST00000529133 FLAD1Q8NFF5 587 aa14.61□□□□□ -0.07
CAPN1-217ENST00000529133 ARXQ96QS3 562 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 154.6 ms