RNA–Protein interactions for RNA: ENST00000528536.1

SIGIRR-214, Transcript of single Ig and TIR domain containing, humanhuman

TSL 3

Gene SIGIRR, Length 366 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGIRR-214ENST00000528536 USP42Q9H9J4 1324 aaKnown RBP16.42■□□□□ 0.22
SIGIRR-214ENST00000528536 ZNF790Q6PG37 636 aa16.41■□□□□ 0.22
SIGIRR-214ENST00000528536 PNISRQ8TF01 805 aaKnown RBP16.41■□□□□ 0.22
SIGIRR-214ENST00000528536 SOS1Q07889 1333 aaPredicted RBP16.41■□□□□ 0.22
SIGIRR-214ENST00000528536 HEG1Q9ULI3 1381 aa16.4■□□□□ 0.22
SIGIRR-214ENST00000528536 STARD3NLO95772 234 aa16.4■□□□□ 0.22
SIGIRR-214ENST00000528536 TEX13AQ9BXU3 409 aaPredicted RBP16.4■□□□□ 0.22
SIGIRR-214ENST00000528536 CHD4Q14839 1912 aa16.39■□□□□ 0.21
SIGIRR-214ENST00000528536 PARP3Q9Y6F1 533 aa16.39■□□□□ 0.21
SIGIRR-214ENST00000528536 KIF13BQ9NQT8 1826 aa16.39■□□□□ 0.21
SIGIRR-214ENST00000528536 COL15A1P39059 1388 aa16.38■□□□□ 0.21
SIGIRR-214ENST00000528536 C10orf71Q711Q0 1435 aa16.38■□□□□ 0.21
SIGIRR-214ENST00000528536 GOLGB1Q14789 3259 aaKnown RBP16.38■□□□□ 0.21
SIGIRR-214ENST00000528536 BTBD11A6QL63 1104 aa16.38■□□□□ 0.21
SIGIRR-214ENST00000528536 ZPR1O75312 459 aa16.38■□□□□ 0.21
SIGIRR-214ENST00000528536 YBX3P16989 372 aaKnown RBP eCLIP16.38■□□□□ 0.21
SIGIRR-214ENST00000528536 TMPOP42166 694 aaKnown RBP16.38■□□□□ 0.21
SIGIRR-214ENST00000528536 RIPK4P57078 832 aa16.38■□□□□ 0.21
SIGIRR-214ENST00000528536 ZNF496Q96IT1 587 aaPredicted RBP16.38■□□□□ 0.21
SIGIRR-214ENST00000528536 FMNL2Q96PY5 1086 aa16.38■□□□□ 0.21
SIGIRR-214ENST00000528536 TGFB2P61812 414 aa16.37■□□□□ 0.21
SIGIRR-214ENST00000528536 LMOD3Q0VAK6 560 aa16.37■□□□□ 0.21
SIGIRR-214ENST00000528536 MCM10Q7L590 875 aa16.37■□□□□ 0.21
SIGIRR-214ENST00000528536 SRP68Q9UHB9 627 aaKnown RBP16.37■□□□□ 0.21
SIGIRR-214ENST00000528536 ZBTB1Q9Y2K1 713 aa16.37■□□□□ 0.21
SIGIRR-214ENST00000528536 CCER2I3L3R5 266 aa16.36■□□□□ 0.21
SIGIRR-214ENST00000528536 DCTN1Q14203 1278 aa16.36■□□□□ 0.21
SIGIRR-214ENST00000528536 NARFQ9UHQ1 456 aa16.36■□□□□ 0.21
SIGIRR-214ENST00000528536 KDM3BQ7LBC6 1761 aa16.36■□□□□ 0.21
SIGIRR-214ENST00000528536 PXDNLA1KZ92 1463 aa16.35■□□□□ 0.21
SIGIRR-214ENST00000528536 A0A087WZG4 1122 aa16.35■□□□□ 0.21
SIGIRR-214ENST00000528536 FKBP8Q14318 412 aa16.35■□□□□ 0.21
SIGIRR-214ENST00000528536 NEUROD2Q15784 382 aa16.35■□□□□ 0.21
SIGIRR-214ENST00000528536 FAM9BQ8IZU0 186 aa16.35■□□□□ 0.21
SIGIRR-214ENST00000528536 RRP7AQ9Y3A4 280 aaKnown RBP16.35■□□□□ 0.21
SIGIRR-214ENST00000528536 KIAA1551Q9HCM1 1747 aa16.35■□□□□ 0.21
SIGIRR-214ENST00000528536 CANXP27824 592 aaKnown RBP16.34■□□□□ 0.21
SIGIRR-214ENST00000528536 USPL1Q5W0Q7 1092 aa16.34■□□□□ 0.21
SIGIRR-214ENST00000528536 APAF1O14727 1248 aa16.33■□□□□ 0.2
SIGIRR-214ENST00000528536 IL6STP40189 918 aaPredicted RBP16.33■□□□□ 0.2
SIGIRR-214ENST00000528536 EIF5P55010 431 aaKnown RBP16.33■□□□□ 0.2
SIGIRR-214ENST00000528536 ZNF784Q8NCA9 323 aaPredicted RBP16.33■□□□□ 0.2
SIGIRR-214ENST00000528536 TM4SF1P30408 202 aa16.32■□□□□ 0.2
SIGIRR-214ENST00000528536 DDR1Q08345 913 aa16.32■□□□□ 0.2
SIGIRR-214ENST00000528536 KCNQ3O43525 872 aa16.31■□□□□ 0.2
SIGIRR-214ENST00000528536 TAF7Q15545 349 aaPredicted RBP16.31■□□□□ 0.2
SIGIRR-214ENST00000528536 NPM2Q86SE8 214 aaKnown RBP16.31■□□□□ 0.2
SIGIRR-214ENST00000528536 MIER1Q8N108 512 aa16.31■□□□□ 0.2
SIGIRR-214ENST00000528536 SCN7AQ01118 1682 aa16.3■□□□□ 0.2
SIGIRR-214ENST00000528536 POLRMTO00411 1230 aaKnown RBP16.3■□□□□ 0.2
SIGIRR-214ENST00000528536 SNRPA1P09661 255 aaKnown RBP16.3■□□□□ 0.2
SIGIRR-214ENST00000528536 THUMPD2Q9BTF0 503 aaKnown RBP16.3■□□□□ 0.2
SIGIRR-214ENST00000528536 TRIM35Q9UPQ4 493 aa16.3■□□□□ 0.2
SIGIRR-214ENST00000528536 N4BP2Q86UW6 1770 aaPredicted RBP16.29■□□□□ 0.2
SIGIRR-214ENST00000528536 A0A0G2JLW4 131 aa16.29■□□□□ 0.2
SIGIRR-214ENST00000528536 BCL2L12Q9HB09 334 aa16.29■□□□□ 0.2
SIGIRR-214ENST00000528536 NRXN2Q9P2S2 1712 aa16.28■□□□□ 0.2
SIGIRR-214ENST00000528536 DPEP1P16444 411 aa16.28■□□□□ 0.2
SIGIRR-214ENST00000528536 NFIXQ14938 502 aa16.28■□□□□ 0.2
SIGIRR-214ENST00000528536 WWC3Q9ULE0 1092 aa16.28■□□□□ 0.2
SIGIRR-214ENST00000528536 LAMB4A4D0S4 1761 aa16.28■□□□□ 0.2
SIGIRR-214ENST00000528536 A1BGP04217 495 aa16.27■□□□□ 0.2
SIGIRR-214ENST00000528536 BCS1LQ9Y276 419 aa16.27■□□□□ 0.2
SIGIRR-214ENST00000528536 ZNF330Q9Y3S2 320 aaPredicted RBP16.27■□□□□ 0.2
SIGIRR-214ENST00000528536 BRCA1P38398 1863 aaKnown RBP16.27■□□□□ 0.19
SIGIRR-214ENST00000528536 PIM2Q9P1W9 311 aa16.26■□□□□ 0.19
SIGIRR-214ENST00000528536 USP16Q9Y5T5 823 aa16.26■□□□□ 0.19
SIGIRR-214ENST00000528536 SERPINB2P05120 415 aa16.25■□□□□ 0.19
SIGIRR-214ENST00000528536 KCNA3P22001 575 aa16.25■□□□□ 0.19
SIGIRR-214ENST00000528536 CALD1Q05682 793 aaKnown RBP16.25■□□□□ 0.19
SIGIRR-214ENST00000528536 NCBP3Q53F19 620 aaKnown RBP16.25■□□□□ 0.19
SIGIRR-214ENST00000528536 BABAM1Q9NWV8 329 aa16.25■□□□□ 0.19
SIGIRR-214ENST00000528536 MIS18AQ9NYP9 233 aa16.25■□□□□ 0.19
SIGIRR-214ENST00000528536 BCORQ6W2J9 1755 aa16.25■□□□□ 0.19
SIGIRR-214ENST00000528536 AFDNP55196 1824 aaKnown RBP16.24■□□□□ 0.19
SIGIRR-214ENST00000528536 CCDC27Q2M243 656 aa16.24■□□□□ 0.19
SIGIRR-214ENST00000528536 TSPYL4Q9UJ04 414 aa16.24■□□□□ 0.19
SIGIRR-214ENST00000528536 TBC1D2BQ9UPU7 963 aa16.24■□□□□ 0.19
SIGIRR-214ENST00000528536 ADCY9O60503 1353 aa16.24■□□□□ 0.19
SIGIRR-214ENST00000528536 CARMIL3Q8ND23 1372 aa16.24■□□□□ 0.19
SIGIRR-214ENST00000528536 SENP3-EIF4A1A0A087X0R7 540 aa16.23■□□□□ 0.19
SIGIRR-214ENST00000528536 PRAMEF22A3QJZ6 481 aa16.23■□□□□ 0.19
SIGIRR-214ENST00000528536 CAMTA2O94983 1202 aa16.23■□□□□ 0.19
SIGIRR-214ENST00000528536 DZIP3Q86Y13 1208 aaKnown RBP16.23■□□□□ 0.19
SIGIRR-214ENST00000528536 ARFGEF1Q9Y6D6 1849 aa16.22■□□□□ 0.19
SIGIRR-214ENST00000528536 ATP10DQ9P241 1426 aa16.22■□□□□ 0.19
SIGIRR-214ENST00000528536 RGL2O15211 777 aa16.22■□□□□ 0.19
SIGIRR-214ENST00000528536 DALRD3Q5D0E6 543 aaKnown RBP16.22■□□□□ 0.19
SIGIRR-214ENST00000528536 TBC1D9BQ66K14 1250 aa16.22■□□□□ 0.19
SIGIRR-214ENST00000528536 NGEFQ8N5V2 710 aa16.22■□□□□ 0.19
SIGIRR-214ENST00000528536 ZNF652Q9Y2D9 606 aa16.22■□□□□ 0.19
SIGIRR-214ENST00000528536 LAS1LQ9Y4W2 734 aaKnown RBP16.22■□□□□ 0.19
SIGIRR-214ENST00000528536 CHRNA5P30532 468 aa16.21■□□□□ 0.19
SIGIRR-214ENST00000528536 EIF4A1P60842 406 aaKnown RBP16.21■□□□□ 0.19
SIGIRR-214ENST00000528536 GNAI1P63096 354 aa16.21■□□□□ 0.19
SIGIRR-214ENST00000528536 CLEC4GQ6UXB4 293 aa16.21■□□□□ 0.19
SIGIRR-214ENST00000528536 BICDL1Q6ZP65 573 aa16.21■□□□□ 0.19
SIGIRR-214ENST00000528536 WWC1Q8IX03 1113 aa16.21■□□□□ 0.19
SIGIRR-214ENST00000528536 CFAP44Q96MT7 982 aa16.21■□□□□ 0.19
SIGIRR-214ENST00000528536 SETDB2Q96T68 719 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms