RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 TRPA1O75762 1119 aa10.26□□□□□ -0.77
VPS26B-204ENST00000527586 NOGQ13253 232 aa10.26□□□□□ -0.77
VPS26B-204ENST00000527586 IP6K1Q92551 441 aa10.26□□□□□ -0.77
VPS26B-204ENST00000527586 HHIPL1Q96JK4 782 aa10.26□□□□□ -0.77
VPS26B-204ENST00000527586 ASAP1Q9ULH1 1129 aa10.26□□□□□ -0.77
VPS26B-204ENST00000527586 ZNF541Q9H0D2 1346 aa10.26□□□□□ -0.77
VPS26B-204ENST00000527586 LTBP3Q9NS15 1303 aa10.26□□□□□ -0.77
VPS26B-204ENST00000527586 MKI67P46013 3256 aaKnown RBP10.25□□□□□ -0.77
VPS26B-204ENST00000527586 BICDL1Q6ZP65 573 aa10.25□□□□□ -0.77
VPS26B-204ENST00000527586 OTUD5Q96G74 571 aa10.25□□□□□ -0.77
VPS26B-204ENST00000527586 RNF186Q9NXI6 227 aa10.25□□□□□ -0.77
VPS26B-204ENST00000527586 H0YIN7 160 aa10.24□□□□□ -0.77
VPS26B-204ENST00000527586 CELF2O95319 508 aaKnown RBP10.24□□□□□ -0.77
VPS26B-204ENST00000527586 TM4SF1P30408 202 aa10.24□□□□□ -0.77
VPS26B-204ENST00000527586 RC3H1Q5TC82 1133 aaKnown RBP10.24□□□□□ -0.77
VPS26B-204ENST00000527586 CGNL1Q0VF96 1302 aa10.24□□□□□ -0.77
VPS26B-204ENST00000527586 PCDH11XQ9BZA7 1347 aa10.24□□□□□ -0.77
VPS26B-204ENST00000527586 PCDH11YQ9BZA8 1340 aa10.24□□□□□ -0.77
VPS26B-204ENST00000527586 COL9A1P20849 921 aa10.23□□□□□ -0.77
VPS26B-204ENST00000527586 RAPGEF4Q8WZA2 1011 aa10.23□□□□□ -0.77
VPS26B-204ENST00000527586 ZNF622Q969S3 477 aaKnown RBP eCLIP10.23□□□□□ -0.77
VPS26B-204ENST00000527586 MAP2P11137 1827 aaKnown RBP10.23□□□□□ -0.77
VPS26B-204ENST00000527586 USP31Q70CQ4 1352 aa10.23□□□□□ -0.77
VPS26B-204ENST00000527586 POTEFA5A3E0 1075 aa10.22□□□□□ -0.77
VPS26B-204ENST00000527586 CYP27B1O15528 508 aa10.22□□□□□ -0.77
VPS26B-204ENST00000527586 TATP17735 454 aaPredicted RBP10.22□□□□□ -0.77
VPS26B-204ENST00000527586 CHRDL2Q6WN34 429 aa10.22□□□□□ -0.77
VPS26B-204ENST00000527586 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.22□□□□□ -0.77
VPS26B-204ENST00000527586 SYNE4Q8N205 404 aa10.22□□□□□ -0.77
VPS26B-204ENST00000527586 HDAC9Q9UKV0 1011 aa10.22□□□□□ -0.77
VPS26B-204ENST00000527586 DICER1Q9UPY3 1922 aaKnown RBP10.22□□□□□ -0.77
VPS26B-204ENST00000527586 USP42Q9H9J4 1324 aaKnown RBP10.22□□□□□ -0.77
VPS26B-204ENST00000527586 SMG6Q86US8 1419 aaKnown RBP10.22□□□□□ -0.77
VPS26B-204ENST00000527586 USHBP1Q8N6Y0 703 aa10.21□□□□□ -0.77
VPS26B-204ENST00000527586 TMOD3Q9NYL9 352 aa10.21□□□□□ -0.77
VPS26B-204ENST00000527586 CNTNAP4Q9C0A0 1308 aa10.21□□□□□ -0.78
VPS26B-204ENST00000527586 INSRP06213 1382 aa10.21□□□□□ -0.78
VPS26B-204ENST00000527586 CD163L1Q9NR16 1453 aa10.21□□□□□ -0.78
VPS26B-204ENST00000527586 H0YGN5 161 aa10.2□□□□□ -0.78
VPS26B-204ENST00000527586 NME9Q86XW9 330 aa10.2□□□□□ -0.78
VPS26B-204ENST00000527586 MPHOSPH9Q99550 1183 aa10.2□□□□□ -0.78
VPS26B-204ENST00000527586 ATG3Q9NT62 314 aa10.2□□□□□ -0.78
VPS26B-204ENST00000527586 RBM27Q9P2N5 1060 aaKnown RBP10.2□□□□□ -0.78
VPS26B-204ENST00000527586 CEP290O15078 2479 aa10.19□□□□□ -0.78
VPS26B-204ENST00000527586 FAM208AQ9UK61 1670 aaKnown RBP10.19□□□□□ -0.78
VPS26B-204ENST00000527586 KIF23Q02241 960 aaPredicted RBP10.19□□□□□ -0.78
VPS26B-204ENST00000527586 NBPF6Q5VWK0 638 aa10.19□□□□□ -0.78
VPS26B-204ENST00000527586 FBXO46Q6PJ61 603 aaPredicted RBP10.19□□□□□ -0.78
VPS26B-204ENST00000527586 DCAF11Q8TEB1 546 aa10.19□□□□□ -0.78
VPS26B-204ENST00000527586 NBPF4Q96M43 638 aa10.19□□□□□ -0.78
VPS26B-204ENST00000527586 SLC4A9Q96Q91 983 aa10.19□□□□□ -0.78
VPS26B-204ENST00000527586 RBM42Q9BTD8 480 aaKnown RBP10.19□□□□□ -0.78
VPS26B-204ENST00000527586 ZNF408Q9H9D4 720 aa10.19□□□□□ -0.78
VPS26B-204ENST00000527586 KTN1Q86UP2 1357 aaKnown RBP10.18□□□□□ -0.78
VPS26B-204ENST00000527586 MAP3K19Q56UN5 1328 aa10.18□□□□□ -0.78
VPS26B-204ENST00000527586 PLA2G5P39877 138 aa10.18□□□□□ -0.78
VPS26B-204ENST00000527586 LTN1O94822 1766 aa10.18□□□□□ -0.78
VPS26B-204ENST00000527586 SERPINB2P05120 415 aa10.17□□□□□ -0.78
VPS26B-204ENST00000527586 LMOD1P29536 600 aaPredicted RBP10.17□□□□□ -0.78
VPS26B-204ENST00000527586 NFIXQ14938 502 aa10.17□□□□□ -0.78
VPS26B-204ENST00000527586 GPC2Q8N158 579 aa10.17□□□□□ -0.78
VPS26B-204ENST00000527586 RAPGEFL1Q9UHV5 662 aa10.17□□□□□ -0.78
VPS26B-204ENST00000527586 KDRP35968 1356 aa10.16□□□□□ -0.78
VPS26B-204ENST00000527586 CENPJQ9HC77 1338 aaPredicted RBP10.16□□□□□ -0.78
VPS26B-204ENST00000527586 FAM155AB1AL88 458 aaPredicted RBP10.16□□□□□ -0.78
VPS26B-204ENST00000527586 HOXC9P31274 260 aa10.16□□□□□ -0.78
VPS26B-204ENST00000527586 EPS15P42566 896 aa10.16□□□□□ -0.78
VPS26B-204ENST00000527586 HUNKP57058 714 aa10.16□□□□□ -0.78
VPS26B-204ENST00000527586 USPL1Q5W0Q7 1092 aa10.16□□□□□ -0.78
VPS26B-204ENST00000527586 FAM122AQ96E09 287 aa10.16□□□□□ -0.78
VPS26B-204ENST00000527586 FER1L6Q2WGJ9 1857 aa10.16□□□□□ -0.78
VPS26B-204ENST00000527586 CARMIL3Q8ND23 1372 aa10.15□□□□□ -0.78
VPS26B-204ENST00000527586 UNC80Q8N2C7 3258 aa10.15□□□□□ -0.78
VPS26B-204ENST00000527586 TRPM7Q96QT4 1865 aa10.15□□□□□ -0.78
VPS26B-204ENST00000527586 ITGB4P16144 1822 aa10.15□□□□□ -0.78
VPS26B-204ENST00000527586 LOC105371045A0A1W2PR82 267 aa10.15□□□□□ -0.78
VPS26B-204ENST00000527586 ZPR1O75312 459 aa10.15□□□□□ -0.78
VPS26B-204ENST00000527586 EN2P19622 333 aaPredicted RBP10.15□□□□□ -0.78
VPS26B-204ENST00000527586 NKX1-1Q15270 411 aaPredicted RBP10.15□□□□□ -0.78
VPS26B-204ENST00000527586 SOGA3Q5TF21 947 aa10.15□□□□□ -0.78
VPS26B-204ENST00000527586 USP50Q70EL3 339 aaPredicted RBP10.15□□□□□ -0.78
VPS26B-204ENST00000527586 CCDC24Q8N4L8 307 aa10.15□□□□□ -0.78
VPS26B-204ENST00000527586 ZNF296Q8WUU4 475 aaPredicted RBP10.15□□□□□ -0.78
VPS26B-204ENST00000527586 ZNF277Q9NRM2 450 aaPredicted RBP10.15□□□□□ -0.78
VPS26B-204ENST00000527586 GJA3Q9Y6H8 435 aa10.15□□□□□ -0.78
VPS26B-204ENST00000527586 DLEC1Q9Y238 1755 aa10.15□□□□□ -0.78
VPS26B-204ENST00000527586 RANBP2P49792 3224 aaKnown RBP10.15□□□□□ -0.78
VPS26B-204ENST00000527586 FZD9O00144 591 aa10.14□□□□□ -0.79
VPS26B-204ENST00000527586 HOXD11P31277 338 aaPredicted RBP10.14□□□□□ -0.79
VPS26B-204ENST00000527586 AMPHP49418 695 aa10.14□□□□□ -0.79
VPS26B-204ENST00000527586 INTS3Q68E01 1043 aaKnown RBP10.14□□□□□ -0.79
VPS26B-204ENST00000527586 RGMBQ6NW40 437 aa10.14□□□□□ -0.79
VPS26B-204ENST00000527586 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.14□□□□□ -0.79
VPS26B-204ENST00000527586 CSRNP1Q96S65 589 aa10.14□□□□□ -0.79
VPS26B-204ENST00000527586 GLIS2Q9BZE0 524 aaPredicted RBP10.14□□□□□ -0.79
VPS26B-204ENST00000527586 CRKLP46109 303 aaKnown RBP10.13□□□□□ -0.79
VPS26B-204ENST00000527586 SOX1O00570 391 aaPredicted RBP10.12□□□□□ -0.79
VPS26B-204ENST00000527586 PRPF40BQ6NWY9 871 aaKnown RBP10.12□□□□□ -0.79
VPS26B-204ENST00000527586 CNKSR1Q969H4 720 aa10.12□□□□□ -0.79
VPS26B-204ENST00000527586 CCDC102AQ96A19 550 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms