RNA–Protein interactions for RNA: ENST00000527584.5

PUF60-210, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 2

Gene PUF60, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-210ENST00000527584 SLC17A8Q8NDX2 589 aa12.19□□□□□ -0.46
PUF60-210ENST00000527584 ASAP1Q9ULH1 1129 aa12.19□□□□□ -0.46
PUF60-210ENST00000527584 COL6A3P12111 3177 aa12.19□□□□□ -0.46
PUF60-210ENST00000527584 KDRP35968 1356 aa12.18□□□□□ -0.46
PUF60-210ENST00000527584 COL5A3P25940 1745 aaPredicted RBP12.18□□□□□ -0.46
PUF60-210ENST00000527584 EAPPQ56P03 285 aaPredicted RBP12.18□□□□□ -0.46
PUF60-210ENST00000527584 NBPF6Q5VWK0 638 aa12.18□□□□□ -0.46
PUF60-210ENST00000527584 CST9Q5W186 159 aa12.18□□□□□ -0.46
PUF60-210ENST00000527584 NBPF4Q96M43 638 aa12.18□□□□□ -0.46
PUF60-210ENST00000527584 SLC4A9Q96Q91 983 aa12.18□□□□□ -0.46
PUF60-210ENST00000527584 TLL2Q9Y6L7 1015 aa12.18□□□□□ -0.46
PUF60-210ENST00000527584 NRXN2Q9P2S2 1712 aa12.17□□□□□ -0.46
PUF60-210ENST00000527584 CNTNAP4Q9C0A0 1308 aa12.17□□□□□ -0.46
PUF60-210ENST00000527584 GRM1Q13255 1194 aa12.17□□□□□ -0.46
PUF60-210ENST00000527584 PAXIP1Q6ZW49 1069 aaPredicted RBP12.17□□□□□ -0.46
PUF60-210ENST00000527584 PNMA8AQ86V59 439 aaPredicted RBP12.17□□□□□ -0.46
PUF60-210ENST00000527584 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.17□□□□□ -0.46
PUF60-210ENST00000527584 CLEC11AQ9Y240 323 aa12.17□□□□□ -0.46
PUF60-210ENST00000527584 INSRP06213 1382 aa12.17□□□□□ -0.46
PUF60-210ENST00000527584 SBNO2Q9Y2G9 1366 aa12.17□□□□□ -0.46
PUF60-210ENST00000527584 TRPM7Q96QT4 1865 aa12.17□□□□□ -0.46
PUF60-210ENST00000527584 AFDNP55196 1824 aaKnown RBP12.16□□□□□ -0.46
PUF60-210ENST00000527584 HOXC9P31274 260 aa12.16□□□□□ -0.46
PUF60-210ENST00000527584 EPHX2P34913 555 aa12.16□□□□□ -0.46
PUF60-210ENST00000527584 HACL1Q9UJ83 578 aa12.16□□□□□ -0.46
PUF60-210ENST00000527584 USP42Q9H9J4 1324 aaKnown RBP12.15□□□□□ -0.46
PUF60-210ENST00000527584 FMR1Q06787 632 aaKnown RBP eCLIP12.15□□□□□ -0.46
PUF60-210ENST00000527584 RAPGEF4Q8WZA2 1011 aa12.15□□□□□ -0.46
PUF60-210ENST00000527584 ATG3Q9NT62 314 aa12.15□□□□□ -0.46
PUF60-210ENST00000527584 SRP68Q9UHB9 627 aaKnown RBP12.15□□□□□ -0.46
PUF60-210ENST00000527584 TATP17735 454 aaPredicted RBP12.14□□□□□ -0.47
PUF60-210ENST00000527584 HHIPL1Q96JK4 782 aa12.14□□□□□ -0.47
PUF60-210ENST00000527584 EVC2Q86UK5 1308 aa12.13□□□□□ -0.47
PUF60-210ENST00000527584 CIAPIN1Q6FI81 312 aa12.13□□□□□ -0.47
PUF60-210ENST00000527584 SAPCD2Q86UD0 394 aa12.13□□□□□ -0.47
PUF60-210ENST00000527584 TRIOBPQ9H2D6 2365 aa12.12□□□□□ -0.47
PUF60-210ENST00000527584 USHBP1Q8N6Y0 703 aa12.12□□□□□ -0.47
PUF60-210ENST00000527584 TAOK3Q9H2K8 898 aa12.12□□□□□ -0.47
PUF60-210ENST00000527584 HPS5Q9UPZ3 1129 aa12.12□□□□□ -0.47
PUF60-210ENST00000527584 C21orf2O43822 256 aa12.11□□□□□ -0.47
PUF60-210ENST00000527584 C2CD5Q86YS7 1000 aa12.11□□□□□ -0.47
PUF60-210ENST00000527584 TMOD3Q9NYL9 352 aa12.11□□□□□ -0.47
PUF60-210ENST00000527584 H0YIN7 160 aa12.09□□□□□ -0.47
PUF60-210ENST00000527584 MNX1P50219 401 aaPredicted RBP12.09□□□□□ -0.47
PUF60-210ENST00000527584 CTU1Q7Z7A3 348 aaKnown RBP12.09□□□□□ -0.47
PUF60-210ENST00000527584 ZIC5Q96T25 663 aa12.09□□□□□ -0.47
PUF60-210ENST00000527584 SAGE1Q9NXZ1 904 aa12.09□□□□□ -0.47
PUF60-210ENST00000527584 ZNF541Q9H0D2 1346 aa12.09□□□□□ -0.47
PUF60-210ENST00000527584 COLQQ9Y215 455 aaPredicted RBP12.08□□□□□ -0.48
PUF60-210ENST00000527584 RNF123Q5XPI4 1314 aa12.08□□□□□ -0.48
PUF60-210ENST00000527584 TRAF5O00463 557 aa12.07□□□□□ -0.48
PUF60-210ENST00000527584 NFIXQ14938 502 aa12.07□□□□□ -0.48
PUF60-210ENST00000527584 BRCA2P51587 3418 aa12.07□□□□□ -0.48
PUF60-210ENST00000527584 CARMIL3Q8ND23 1372 aa12.06□□□□□ -0.48
PUF60-210ENST00000527584 FBLN1P23142 703 aa12.06□□□□□ -0.48
PUF60-210ENST00000527584 AMPHP49418 695 aa12.06□□□□□ -0.48
PUF60-210ENST00000527584 NOGQ13253 232 aa12.06□□□□□ -0.48
PUF60-210ENST00000527584 RANBP2P49792 3224 aaKnown RBP12.05□□□□□ -0.48
PUF60-210ENST00000527584 SERPINB2P05120 415 aa12.05□□□□□ -0.48
PUF60-210ENST00000527584 PKN2Q16513 984 aaKnown RBP12.05□□□□□ -0.48
PUF60-210ENST00000527584 ANKRD31Q8N7Z5 1873 aa12.05□□□□□ -0.48
PUF60-210ENST00000527584 RTL1A6NKG5 1358 aa12.05□□□□□ -0.48
PUF60-210ENST00000527584 SLX4Q8IY92 1834 aa12.04□□□□□ -0.48
PUF60-210ENST00000527584 EDC4Q6P2E9 1401 aaKnown RBP12.04□□□□□ -0.48
PUF60-210ENST00000527584 FZD9O00144 591 aa12.04□□□□□ -0.48
PUF60-210ENST00000527584 CRKLP46109 303 aaKnown RBP12.04□□□□□ -0.48
PUF60-210ENST00000527584 USPL1Q5W0Q7 1092 aa12.04□□□□□ -0.48
PUF60-210ENST00000527584 PDZRN3Q9UPQ7 1066 aa12.04□□□□□ -0.48
PUF60-210ENST00000527584 AKAP4Q5JQC9 854 aa12.03□□□□□ -0.48
PUF60-210ENST00000527584 PPARGC1BQ86YN6 1023 aaKnown RBP12.03□□□□□ -0.48
PUF60-210ENST00000527584 GPC2Q8N158 579 aa12.03□□□□□ -0.48
PUF60-210ENST00000527584 RBM42Q9BTD8 480 aaKnown RBP12.03□□□□□ -0.48
PUF60-210ENST00000527584 RNF186Q9NXI6 227 aa12.03□□□□□ -0.48
PUF60-210ENST00000527584 COL11A2P13942 1736 aaPredicted RBP12.03□□□□□ -0.48
PUF60-210ENST00000527584 CEP290O15078 2479 aa12.02□□□□□ -0.48
PUF60-210ENST00000527584 ZNF622Q969S3 477 aaKnown RBP eCLIP12.02□□□□□ -0.49
PUF60-210ENST00000527584 CACNA1SQ13698 1873 aa12.02□□□□□ -0.49
PUF60-210ENST00000527584 AKAP11Q9UKA4 1901 aa12.01□□□□□ -0.49
PUF60-210ENST00000527584 UNC80Q8N2C7 3258 aa12.01□□□□□ -0.49
PUF60-210ENST00000527584 ARFGEF2Q9Y6D5 1785 aa12.01□□□□□ -0.49
PUF60-210ENST00000527584 SOGA3Q5TF21 947 aa12.01□□□□□ -0.49
PUF60-210ENST00000527584 INTS5Q6P9B9 1019 aaKnown RBP12.01□□□□□ -0.49
PUF60-210ENST00000527584 C7orf43Q8WVR3 580 aa12.01□□□□□ -0.49
PUF60-210ENST00000527584 OTUD5Q96G74 571 aa12.01□□□□□ -0.49
PUF60-210ENST00000527584 BCL2L12Q9HB09 334 aa12.01□□□□□ -0.49
PUF60-210ENST00000527584 NCAPD2Q15021 1401 aa12.01□□□□□ -0.49
PUF60-210ENST00000527584 SCN11AQ9UI33 1791 aa12□□□□□ -0.49
PUF60-210ENST00000527584 VCANP13611 3396 aa12□□□□□ -0.49
PUF60-210ENST00000527584 FAM155AB1AL88 458 aaPredicted RBP12□□□□□ -0.49
PUF60-210ENST00000527584 ZPR1O75312 459 aa12□□□□□ -0.49
PUF60-210ENST00000527584 CELF2O95319 508 aaKnown RBP12□□□□□ -0.49
PUF60-210ENST00000527584 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12□□□□□ -0.49
PUF60-210ENST00000527584 SPG7Q9UQ90 795 aa12□□□□□ -0.49
PUF60-210ENST00000527584 TRPA1O75762 1119 aa11.99□□□□□ -0.49
PUF60-210ENST00000527584 PHKG2P15735 406 aa11.99□□□□□ -0.49
PUF60-210ENST00000527584 USP50Q70EL3 339 aaPredicted RBP11.99□□□□□ -0.49
PUF60-210ENST00000527584 BRIP1Q9BX63 1249 aa11.99□□□□□ -0.49
PUF60-210ENST00000527584 NARFQ9UHQ1 456 aa11.99□□□□□ -0.49
PUF60-210ENST00000527584 CENPFP49454 3210 aa11.98□□□□□ -0.49
PUF60-210ENST00000527584 PDE6BP35913 854 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms