RNA–Protein interactions for RNA: ENST00000527339.1

LTBP3-208, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-208ENST00000527339 TMPOP42166 694 aaKnown RBP22.86■■□□□ 1.25
LTBP3-208ENST00000527339 MYH14Q7Z406 1995 aaKnown RBP22.85■■□□□ 1.25
LTBP3-208ENST00000527339 KIF13BQ9NQT8 1826 aa22.85■■□□□ 1.25
LTBP3-208ENST00000527339 BTBD11A6QL63 1104 aa22.85■■□□□ 1.25
LTBP3-208ENST00000527339 HSPA6P17066 643 aa22.85■■□□□ 1.25
LTBP3-208ENST00000527339 RIPK4P57078 832 aa22.85■■□□□ 1.25
LTBP3-208ENST00000527339 ZNF790Q6PG37 636 aa22.85■■□□□ 1.25
LTBP3-208ENST00000527339 N4BP2Q86UW6 1770 aaPredicted RBP22.85■■□□□ 1.25
LTBP3-208ENST00000527339 LMOD3Q0VAK6 560 aa22.84■■□□□ 1.25
LTBP3-208ENST00000527339 VSIG10Q8N0Z9 540 aa22.83■■□□□ 1.25
LTBP3-208ENST00000527339 PNISRQ8TF01 805 aaKnown RBP22.83■■□□□ 1.25
LTBP3-208ENST00000527339 CNTNAP4Q9C0A0 1308 aa22.82■■□□□ 1.24
LTBP3-208ENST00000527339 KDM3BQ7LBC6 1761 aa22.82■■□□□ 1.24
LTBP3-208ENST00000527339 A0A0G2JLW4 131 aa22.82■■□□□ 1.24
LTBP3-208ENST00000527339 TAF7Q15545 349 aaPredicted RBP22.82■■□□□ 1.24
LTBP3-208ENST00000527339 RC3H1Q5TC82 1133 aaKnown RBP22.82■■□□□ 1.24
LTBP3-208ENST00000527339 ARHGEF1Q92888 912 aaKnown RBP22.82■■□□□ 1.24
LTBP3-208ENST00000527339 HEG1Q9ULI3 1381 aa22.8■■□□□ 1.24
LTBP3-208ENST00000527339 TRAPPC3LQ5T215 181 aa22.8■■□□□ 1.24
LTBP3-208ENST00000527339 ZNF496Q96IT1 587 aaPredicted RBP22.8■■□□□ 1.24
LTBP3-208ENST00000527339 RRP7AQ9Y3A4 280 aaKnown RBP22.8■■□□□ 1.24
LTBP3-208ENST00000527339 C10orf71Q711Q0 1435 aa22.8■■□□□ 1.24
LTBP3-208ENST00000527339 GYS1P13807 737 aa22.79■■□□□ 1.24
LTBP3-208ENST00000527339 NEUROD2Q15784 382 aa22.79■■□□□ 1.24
LTBP3-208ENST00000527339 DNAJC10Q8IXB1 793 aa22.79■■□□□ 1.24
LTBP3-208ENST00000527339 FMNL2Q96PY5 1086 aa22.79■■□□□ 1.24
LTBP3-208ENST00000527339 THUMPD2Q9BTF0 503 aaKnown RBP22.79■■□□□ 1.24
LTBP3-208ENST00000527339 RTCBQ9Y3I0 505 aaKnown RBP22.79■■□□□ 1.24
LTBP3-208ENST00000527339 CRKLP46109 303 aaKnown RBP22.78■■□□□ 1.24
LTBP3-208ENST00000527339 KCNQ3O43525 872 aa22.77■■□□□ 1.24
LTBP3-208ENST00000527339 DPEP1P16444 411 aa22.77■■□□□ 1.24
LTBP3-208ENST00000527339 BCS1LQ9Y276 419 aa22.77■■□□□ 1.24
LTBP3-208ENST00000527339 APAF1O14727 1248 aa22.76■■□□□ 1.23
LTBP3-208ENST00000527339 KCNA3P22001 575 aa22.76■■□□□ 1.23
LTBP3-208ENST00000527339 TGFB2P61812 414 aa22.76■■□□□ 1.23
LTBP3-208ENST00000527339 NLGN1Q8N2Q7 840 aa22.76■■□□□ 1.23
LTBP3-208ENST00000527339 TEX13AQ9BXU3 409 aaPredicted RBP22.76■■□□□ 1.23
LTBP3-208ENST00000527339 BRCA1P38398 1863 aaKnown RBP22.75■■□□□ 1.23
LTBP3-208ENST00000527339 C4AP0C0L4 1744 aa22.75■■□□□ 1.23
LTBP3-208ENST00000527339 RPS6KA4O75676 772 aa22.75■■□□□ 1.23
LTBP3-208ENST00000527339 CYP19A1P11511 503 aaPredicted RBP22.75■■□□□ 1.23
LTBP3-208ENST00000527339 TRIM35Q9UPQ4 493 aa22.75■■□□□ 1.23
LTBP3-208ENST00000527339 ADRA2BP18089 450 aa22.74■■□□□ 1.23
LTBP3-208ENST00000527339 CCDC87Q9NVE4 849 aa22.74■■□□□ 1.23
LTBP3-208ENST00000527339 STARD3NLO95772 234 aa22.73■■□□□ 1.23
LTBP3-208ENST00000527339 INTS5Q6P9B9 1019 aaKnown RBP22.73■■□□□ 1.23
LTBP3-208ENST00000527339 BABAM1Q9NWV8 329 aa22.73■■□□□ 1.23
LTBP3-208ENST00000527339 MIS18AQ9NYP9 233 aa22.73■■□□□ 1.23
LTBP3-208ENST00000527339 SRP68Q9UHB9 627 aaKnown RBP22.73■■□□□ 1.23
LTBP3-208ENST00000527339 LAMB4A4D0S4 1761 aa22.73■■□□□ 1.23
LTBP3-208ENST00000527339 NMRK2Q9NPI5 230 aa22.72■■□□□ 1.23
LTBP3-208ENST00000527339 RFC4P35249 363 aa22.71■■□□□ 1.23
LTBP3-208ENST00000527339 ARHGAP27Q6ZUM4 889 aa22.71■■□□□ 1.23
LTBP3-208ENST00000527339 SNRPA1P09661 255 aaKnown RBP22.7■■□□□ 1.22
LTBP3-208ENST00000527339 TSPYL4Q9UJ04 414 aa22.7■■□□□ 1.22
LTBP3-208ENST00000527339 PCNTO95613 3336 aa22.7■■□□□ 1.22
LTBP3-208ENST00000527339 DDR1Q08345 913 aa22.69■■□□□ 1.22
LTBP3-208ENST00000527339 FKBP8Q14318 412 aa22.69■■□□□ 1.22
LTBP3-208ENST00000527339 ZBTB1Q9Y2K1 713 aa22.69■■□□□ 1.22
LTBP3-208ENST00000527339 SOS1Q07889 1333 aaPredicted RBP22.68■■□□□ 1.22
LTBP3-208ENST00000527339 EIF4A1P60842 406 aaKnown RBP22.68■■□□□ 1.22
LTBP3-208ENST00000527339 DIEXFQ68CQ4 756 aaKnown RBP22.68■■□□□ 1.22
LTBP3-208ENST00000527339 FAM9BQ8IZU0 186 aa22.68■■□□□ 1.22
LTBP3-208ENST00000527339 DNAJC5GQ8N7S2 189 aa22.68■■□□□ 1.22
LTBP3-208ENST00000527339 PARP3Q9Y6F1 533 aa22.68■■□□□ 1.22
LTBP3-208ENST00000527339 CCER2I3L3R5 266 aa22.66■■□□□ 1.22
LTBP3-208ENST00000527339 CALD1Q05682 793 aaKnown RBP22.66■■□□□ 1.22
LTBP3-208ENST00000527339 NCBP3Q53F19 620 aaKnown RBP22.66■■□□□ 1.22
LTBP3-208ENST00000527339 USP16Q9Y5T5 823 aa22.66■■□□□ 1.22
LTBP3-208ENST00000527339 COL15A1P39059 1388 aa22.65■■□□□ 1.22
LTBP3-208ENST00000527339 USP42Q9H9J4 1324 aaKnown RBP22.65■■□□□ 1.22
LTBP3-208ENST00000527339 PRAMEF22A3QJZ6 481 aa22.65■■□□□ 1.22
LTBP3-208ENST00000527339 CHL1O00533 1208 aa22.65■■□□□ 1.22
LTBP3-208ENST00000527339 TOMM70O94826 608 aa22.65■■□□□ 1.22
LTBP3-208ENST00000527339 C9orf131Q5VYM1 1079 aa22.65■■□□□ 1.22
LTBP3-208ENST00000527339 ARFGEF1Q9Y6D6 1849 aa22.65■■□□□ 1.22
LTBP3-208ENST00000527339 CANXP27824 592 aaKnown RBP22.64■■□□□ 1.21
LTBP3-208ENST00000527339 CHRNA5P30532 468 aa22.64■■□□□ 1.21
LTBP3-208ENST00000527339 CCDC27Q2M243 656 aa22.64■■□□□ 1.21
LTBP3-208ENST00000527339 CFAP44Q96MT7 982 aa22.63■■□□□ 1.21
LTBP3-208ENST00000527339 LAS1LQ9Y4W2 734 aaKnown RBP22.63■■□□□ 1.21
LTBP3-208ENST00000527339 A1BGP04217 495 aa22.62■■□□□ 1.21
LTBP3-208ENST00000527339 IL6STP40189 918 aaPredicted RBP22.62■■□□□ 1.21
LTBP3-208ENST00000527339 APLP1P51693 650 aa22.62■■□□□ 1.21
LTBP3-208ENST00000527339 EIF5P55010 431 aaKnown RBP22.62■■□□□ 1.21
LTBP3-208ENST00000527339 HTRA3P83110 453 aa22.62■■□□□ 1.21
LTBP3-208ENST00000527339 POLRMTO00411 1230 aaKnown RBP22.61■■□□□ 1.21
LTBP3-208ENST00000527339 TM4SF1P30408 202 aa22.61■■□□□ 1.21
LTBP3-208ENST00000527339 PIM2Q9P1W9 311 aa22.61■■□□□ 1.21
LTBP3-208ENST00000527339 A0A087WZG4 1122 aa22.6■■□□□ 1.21
LTBP3-208ENST00000527339 ZNF853P0CG23 659 aa22.6■■□□□ 1.21
LTBP3-208ENST00000527339 IFT57Q9NWB7 429 aa22.6■■□□□ 1.21
LTBP3-208ENST00000527339 SCN7AQ01118 1682 aa22.59■■□□□ 1.21
LTBP3-208ENST00000527339 ZPR1O75312 459 aa22.59■■□□□ 1.21
LTBP3-208ENST00000527339 GNAI1P63096 354 aa22.59■■□□□ 1.21
LTBP3-208ENST00000527339 WWC1Q8IX03 1113 aa22.59■■□□□ 1.21
LTBP3-208ENST00000527339 NARFQ9UHQ1 456 aa22.59■■□□□ 1.21
LTBP3-208ENST00000527339 DALRD3Q5D0E6 543 aaKnown RBP22.58■■□□□ 1.21
LTBP3-208ENST00000527339 NPM2Q86SE8 214 aaKnown RBP22.58■■□□□ 1.21
LTBP3-208ENST00000527339 NGEFQ8N5V2 710 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms