RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 PLEKHF1Q96S99 279 aa21.39■■□□□ 1.01
CTSB-213ENST00000527215 SRP68Q9UHB9 627 aaKnown RBP21.39■■□□□ 1.01
CTSB-213ENST00000527215 ZBTB1Q9Y2K1 713 aa21.39■■□□□ 1.01
CTSB-213ENST00000527215 AFDNP55196 1824 aaKnown RBP21.38■■□□□ 1.01
CTSB-213ENST00000527215 COL15A1P39059 1388 aa21.37■■□□□ 1.01
CTSB-213ENST00000527215 KCNQ3O43525 872 aa21.37■■□□□ 1.01
CTSB-213ENST00000527215 HTATSF1O43719 755 aaKnown RBP21.37■■□□□ 1.01
CTSB-213ENST00000527215 YBX3P16989 372 aaKnown RBP eCLIP21.36■■□□□ 1.01
CTSB-213ENST00000527215 FMNL2Q96PY5 1086 aa21.36■■□□□ 1.01
CTSB-213ENST00000527215 BRCA1P38398 1863 aaKnown RBP21.36■■□□□ 1.01
CTSB-213ENST00000527215 LAMB4A4D0S4 1761 aa21.36■■□□□ 1.01
CTSB-213ENST00000527215 SCN7AQ01118 1682 aa21.35■■□□□ 1.01
CTSB-213ENST00000527215 STARD3NLO95772 234 aa21.35■■□□□ 1.01
CTSB-213ENST00000527215 FKBP8Q14318 412 aa21.35■■□□□ 1.01
CTSB-213ENST00000527215 MAPK8IP3Q9UPT6 1336 aa21.34■■□□□ 1.01
CTSB-213ENST00000527215 CANXP27824 592 aaKnown RBP21.34■■□□□ 1.01
CTSB-213ENST00000527215 TEX13AQ9BXU3 409 aaPredicted RBP21.34■■□□□ 1.01
CTSB-213ENST00000527215 PNNQ9H307 717 aaKnown RBP21.34■■□□□ 1.01
CTSB-213ENST00000527215 C10orf71Q711Q0 1435 aa21.34■■□□□ 1.01
CTSB-213ENST00000527215 ZPR1O75312 459 aa21.33■■□□□ 1.01
CTSB-213ENST00000527215 GIGYF1O75420 1035 aaPredicted RBP21.33■■□□□ 1.01
CTSB-213ENST00000527215 NFE2L2Q16236 605 aa21.33■■□□□ 1.01
CTSB-213ENST00000527215 USPL1Q5W0Q7 1092 aa21.33■■□□□ 1.01
CTSB-213ENST00000527215 PARP3Q9Y6F1 533 aa21.33■■□□□ 1.01
CTSB-213ENST00000527215 BCORQ6W2J9 1755 aa21.33■■□□□ 1
CTSB-213ENST00000527215 C1QTNF8P60827 252 aa21.32■■□□□ 1
CTSB-213ENST00000527215 NARFQ9UHQ1 456 aa21.32■■□□□ 1
CTSB-213ENST00000527215 NRXN2Q9P2S2 1712 aa21.32■■□□□ 1
CTSB-213ENST00000527215 PXDNLA1KZ92 1463 aa21.32■■□□□ 1
CTSB-213ENST00000527215 EIF5P55010 431 aaKnown RBP21.3■■□□□ 1
CTSB-213ENST00000527215 DDR1Q08345 913 aa21.3■■□□□ 1
CTSB-213ENST00000527215 TAF7Q15545 349 aaPredicted RBP21.3■■□□□ 1
CTSB-213ENST00000527215 PRKRIP1Q9H875 184 aaPredicted RBP21.3■■□□□ 1
CTSB-213ENST00000527215 WWC3Q9ULE0 1092 aa21.3■■□□□ 1
CTSB-213ENST00000527215 SENP3-EIF4A1A0A087X0R7 540 aa21.28■■□□□ 1
CTSB-213ENST00000527215 PRAMEF22A3QJZ6 481 aa21.28■■□□□ 1
CTSB-213ENST00000527215 A1BGP04217 495 aa21.28■■□□□ 1
CTSB-213ENST00000527215 TM4SF1P30408 202 aa21.28■■□□□ 1
CTSB-213ENST00000527215 THUMPD2Q9BTF0 503 aaKnown RBP21.28■■□□□ 1
CTSB-213ENST00000527215 MIS18AQ9NYP9 233 aa21.28■■□□□ 1
CTSB-213ENST00000527215 ARFGEF1Q9Y6D6 1849 aa21.27■■□□□ 1
CTSB-213ENST00000527215 BCL2L12Q9HB09 334 aa21.27■■□□□ 1
CTSB-213ENST00000527215 ZNF330Q9Y3S2 320 aaPredicted RBP21.27■■□□□ 1
CTSB-213ENST00000527215 USP16Q9Y5T5 823 aa21.27■■□□□ 1
CTSB-213ENST00000527215 A0A087WZG4 1122 aa21.26■□□□□ 0.99
CTSB-213ENST00000527215 POLRMTO00411 1230 aaKnown RBP21.26■□□□□ 0.99
CTSB-213ENST00000527215 SNRPA1P09661 255 aaKnown RBP21.26■□□□□ 0.99
CTSB-213ENST00000527215 IL6STP40189 918 aaPredicted RBP21.26■□□□□ 0.99
CTSB-213ENST00000527215 TGFB2P61812 414 aa21.26■□□□□ 0.99
CTSB-213ENST00000527215 DLEC1Q9Y238 1755 aa21.25■□□□□ 0.99
CTSB-213ENST00000527215 NFIXQ14938 502 aa21.25■□□□□ 0.99
CTSB-213ENST00000527215 ATP10DQ9P241 1426 aa21.25■□□□□ 0.99
CTSB-213ENST00000527215 A0A0G2JLW4 131 aa21.24■□□□□ 0.99
CTSB-213ENST00000527215 RIPK4P57078 832 aa21.24■□□□□ 0.99
CTSB-213ENST00000527215 WDR43Q15061 677 aaKnown RBP eCLIP21.24■□□□□ 0.99
CTSB-213ENST00000527215 CCDC146Q8IYE0 955 aa21.24■□□□□ 0.99
CTSB-213ENST00000527215 PNISRQ8TF01 805 aaKnown RBP21.24■□□□□ 0.99
CTSB-213ENST00000527215 DPEP1P16444 411 aa21.23■□□□□ 0.99
CTSB-213ENST00000527215 PIP4K2AP48426 406 aaPredicted RBP21.23■□□□□ 0.99
CTSB-213ENST00000527215 TBC1D2BQ9UPU7 963 aa21.23■□□□□ 0.99
CTSB-213ENST00000527215 ANKRD31Q8N7Z5 1873 aa21.23■□□□□ 0.99
CTSB-213ENST00000527215 TMPOP42166 694 aaKnown RBP21.22■□□□□ 0.99
CTSB-213ENST00000527215 NPM2Q86SE8 214 aaKnown RBP21.22■□□□□ 0.99
CTSB-213ENST00000527215 ADAMTS8Q9UP79 889 aa21.21■□□□□ 0.99
CTSB-213ENST00000527215 ADCY9O60503 1353 aa21.21■□□□□ 0.99
CTSB-213ENST00000527215 BICDL1Q6ZP65 573 aa21.2■□□□□ 0.98
CTSB-213ENST00000527215 RRP7AQ9Y3A4 280 aaKnown RBP21.2■□□□□ 0.98
CTSB-213ENST00000527215 SERPINB2P05120 415 aa21.19■□□□□ 0.98
CTSB-213ENST00000527215 EIF4A1P60842 406 aaKnown RBP21.19■□□□□ 0.98
CTSB-213ENST00000527215 TBC1D9BQ66K14 1250 aa21.19■□□□□ 0.98
CTSB-213ENST00000527215 RUNDC1Q96C34 613 aa21.19■□□□□ 0.98
CTSB-213ENST00000527215 GPBP1L1Q9HC44 474 aaPredicted RBP21.19■□□□□ 0.98
CTSB-213ENST00000527215 NUP98P52948 1817 aa21.19■□□□□ 0.98
CTSB-213ENST00000527215 ZNF316A6NFI3 1004 aaPredicted RBP21.18■□□□□ 0.98
CTSB-213ENST00000527215 CAMTA2O94983 1202 aa21.18■□□□□ 0.98
CTSB-213ENST00000527215 KCNA3P22001 575 aa21.18■□□□□ 0.98
CTSB-213ENST00000527215 LMOD3Q0VAK6 560 aa21.18■□□□□ 0.98
CTSB-213ENST00000527215 NEUROD2Q15784 382 aa21.18■□□□□ 0.98
CTSB-213ENST00000527215 DZIP3Q86Y13 1208 aaKnown RBP21.18■□□□□ 0.98
CTSB-213ENST00000527215 BCS1LQ9Y276 419 aa21.18■□□□□ 0.98
CTSB-213ENST00000527215 NBPF26B4DH59 902 aa21.17■□□□□ 0.98
CTSB-213ENST00000527215 NBPF10Q6P3W6 841 aaKnown RBP21.17■□□□□ 0.98
CTSB-213ENST00000527215 NBPF15Q8N660 670 aa21.17■□□□□ 0.98
CTSB-213ENST00000527215 CACNA1SQ13698 1873 aa21.17■□□□□ 0.98
CTSB-213ENST00000527215 COL11A2P13942 1736 aaPredicted RBP21.16■□□□□ 0.98
CTSB-213ENST00000527215 CARMIL3Q8ND23 1372 aa21.16■□□□□ 0.98
CTSB-213ENST00000527215 CHRNA5P30532 468 aa21.16■□□□□ 0.98
CTSB-213ENST00000527215 TSPYL4Q9UJ04 414 aa21.16■□□□□ 0.98
CTSB-213ENST00000527215 PIM2Q9P1W9 311 aa21.14■□□□□ 0.97
CTSB-213ENST00000527215 TRIM35Q9UPQ4 493 aa21.13■□□□□ 0.97
CTSB-213ENST00000527215 SBF1O95248 1867 aa21.13■□□□□ 0.97
CTSB-213ENST00000527215 ZNF526Q8TF50 670 aaPredicted RBP21.12■□□□□ 0.97
CTSB-213ENST00000527215 BABAM1Q9NWV8 329 aa21.12■□□□□ 0.97
CTSB-213ENST00000527215 DALRD3Q5D0E6 543 aaKnown RBP21.11■□□□□ 0.97
CTSB-213ENST00000527215 SETDB2Q96T68 719 aa21.11■□□□□ 0.97
CTSB-213ENST00000527215 CCDC88AQ3V6T2 1871 aa21.11■□□□□ 0.97
CTSB-213ENST00000527215 PRR5LQ6MZQ0 368 aa21.1■□□□□ 0.97
CTSB-213ENST00000527215 CLEC4GQ6UXB4 293 aa21.1■□□□□ 0.97
CTSB-213ENST00000527215 ZNF652Q9Y2D9 606 aa21.1■□□□□ 0.97
CTSB-213ENST00000527215 ARFGEF2Q9Y6D5 1785 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms