RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 GIGYF1O75420 1035 aaPredicted RBP14.33□□□□□ -0.12
VPS11-202ENST00000526829 HSP90AB1P08238 724 aaKnown RBP14.33□□□□□ -0.12
VPS11-202ENST00000526829 MORC1Q86VD1 984 aa14.33□□□□□ -0.12
VPS11-202ENST00000526829 DCAF5Q96JK2 942 aa14.33□□□□□ -0.12
VPS11-202ENST00000526829 KDM6AO15550 1401 aaPredicted RBP14.32□□□□□ -0.12
VPS11-202ENST00000526829 PLEKHO1Q53GL0 409 aaPredicted RBP14.32□□□□□ -0.12
VPS11-202ENST00000526829 CNPY4Q8N129 248 aa14.32□□□□□ -0.12
VPS11-202ENST00000526829 SLC4A9Q96Q91 983 aa14.32□□□□□ -0.12
VPS11-202ENST00000526829 KIF13BQ9NQT8 1826 aa14.32□□□□□ -0.12
VPS11-202ENST00000526829 ADCY9O60503 1353 aa14.31□□□□□ -0.12
VPS11-202ENST00000526829 SENP3-EIF4A1A0A087X0R7 540 aa14.31□□□□□ -0.12
VPS11-202ENST00000526829 ZBTB22O15209 634 aa14.31□□□□□ -0.12
VPS11-202ENST00000526829 CNGB1Q14028 1251 aaPredicted RBP14.31□□□□□ -0.12
VPS11-202ENST00000526829 AMOTQ4VCS5 1084 aa14.31□□□□□ -0.12
VPS11-202ENST00000526829 KNSTRNQ9Y448 316 aa14.31□□□□□ -0.12
VPS11-202ENST00000526829 ATP10DQ9P241 1426 aa14.31□□□□□ -0.12
VPS11-202ENST00000526829 CALD1Q05682 793 aaKnown RBP14.31□□□□□ -0.12
VPS11-202ENST00000526829 ARID3AQ99856 593 aa14.31□□□□□ -0.12
VPS11-202ENST00000526829 PRDM4Q9UKN5 801 aa14.31□□□□□ -0.12
VPS11-202ENST00000526829 KIAA1551Q9HCM1 1747 aa14.31□□□□□ -0.12
VPS11-202ENST00000526829 RC3H1Q5TC82 1133 aaKnown RBP14.3□□□□□ -0.12
VPS11-202ENST00000526829 ZNF530Q6P9A1 599 aaPredicted RBP14.3□□□□□ -0.12
VPS11-202ENST00000526829 CNTNAP4Q9C0A0 1308 aa14.29□□□□□ -0.12
VPS11-202ENST00000526829 HSP90AA2PQ14568 343 aaPredicted RBP14.29□□□□□ -0.12
VPS11-202ENST00000526829 CICQ96RK0 1608 aaPredicted RBP14.29□□□□□ -0.12
VPS11-202ENST00000526829 AEBP1Q8IUX7 1158 aa14.29□□□□□ -0.12
VPS11-202ENST00000526829 MYH14Q7Z406 1995 aaKnown RBP14.28□□□□□ -0.12
VPS11-202ENST00000526829 RNF123Q5XPI4 1314 aa14.28□□□□□ -0.12
VPS11-202ENST00000526829 ADRA2BP18089 450 aa14.28□□□□□ -0.12
VPS11-202ENST00000526829 TRAPPC3LQ5T215 181 aa14.28□□□□□ -0.12
VPS11-202ENST00000526829 RTCBQ9Y3I0 505 aaKnown RBP14.28□□□□□ -0.12
VPS11-202ENST00000526829 MMP10P09238 476 aa14.27□□□□□ -0.12
VPS11-202ENST00000526829 RBM42Q9BTD8 480 aaKnown RBP14.27□□□□□ -0.12
VPS11-202ENST00000526829 C4AP0C0L4 1744 aa14.27□□□□□ -0.12
VPS11-202ENST00000526829 PXDNLA1KZ92 1463 aa14.27□□□□□ -0.13
VPS11-202ENST00000526829 SCN11AQ9UI33 1791 aa14.27□□□□□ -0.13
VPS11-202ENST00000526829 IL13P35225 146 aa14.27□□□□□ -0.13
VPS11-202ENST00000526829 CABP4P57796 275 aa14.27□□□□□ -0.13
VPS11-202ENST00000526829 C1orf141Q5JVX7 400 aa14.27□□□□□ -0.13
VPS11-202ENST00000526829 NLGN1Q8N2Q7 840 aa14.27□□□□□ -0.13
VPS11-202ENST00000526829 C10orf71Q711Q0 1435 aa14.26□□□□□ -0.13
VPS11-202ENST00000526829 RPS6KA4O75676 772 aa14.26□□□□□ -0.13
VPS11-202ENST00000526829 CLSTN1O94985 981 aa14.26□□□□□ -0.13
VPS11-202ENST00000526829 MTHFSP49914 203 aa14.26□□□□□ -0.13
VPS11-202ENST00000526829 ARHGEF1Q92888 912 aaKnown RBP14.26□□□□□ -0.13
VPS11-202ENST00000526829 PRKRIP1Q9H875 184 aaPredicted RBP14.26□□□□□ -0.13
VPS11-202ENST00000526829 TJP1Q07157 1748 aa14.26□□□□□ -0.13
VPS11-202ENST00000526829 SULT6B1Q6IMI4 303 aa14.25□□□□□ -0.13
VPS11-202ENST00000526829 BRPF3Q9ULD4 1205 aa14.25□□□□□ -0.13
VPS11-202ENST00000526829 CCDC184Q52MB2 194 aa14.25□□□□□ -0.13
VPS11-202ENST00000526829 N4BP2Q86UW6 1770 aaPredicted RBP14.25□□□□□ -0.13
VPS11-202ENST00000526829 GYS1P13807 737 aa14.24□□□□□ -0.13
VPS11-202ENST00000526829 TGFB2P61812 414 aa14.24□□□□□ -0.13
VPS11-202ENST00000526829 WWC3Q9ULE0 1092 aa14.23□□□□□ -0.13
VPS11-202ENST00000526829 BRCA1P38398 1863 aaKnown RBP14.23□□□□□ -0.13
VPS11-202ENST00000526829 NFATC2IPQ8NCF5 419 aa14.23□□□□□ -0.13
VPS11-202ENST00000526829 GPBP1L1Q9HC44 474 aaPredicted RBP14.23□□□□□ -0.13
VPS11-202ENST00000526829 MRS2Q9HD23 443 aa14.23□□□□□ -0.13
VPS11-202ENST00000526829 RFC4P35249 363 aa14.22□□□□□ -0.13
VPS11-202ENST00000526829 FAM9BQ8IZU0 186 aa14.22□□□□□ -0.13
VPS11-202ENST00000526829 ADAMTS7Q9UKP4 1686 aa14.22□□□□□ -0.13
VPS11-202ENST00000526829 KIF7Q2M1P5 1343 aa14.22□□□□□ -0.13
VPS11-202ENST00000526829 MRC1P22897 1456 aa14.22□□□□□ -0.13
VPS11-202ENST00000526829 PTCD1O75127 700 aaKnown RBP14.22□□□□□ -0.13
VPS11-202ENST00000526829 VIRMAQ69YN4 1812 aaKnown RBP14.21□□□□□ -0.13
VPS11-202ENST00000526829 CRKLP46109 303 aaKnown RBP14.21□□□□□ -0.13
VPS11-202ENST00000526829 AKAP4Q5JQC9 854 aa14.21□□□□□ -0.13
VPS11-202ENST00000526829 CCDC87Q9NVE4 849 aa14.21□□□□□ -0.13
VPS11-202ENST00000526829 A0A0G2JLW4 131 aa14.2□□□□□ -0.14
VPS11-202ENST00000526829 PER1O15534 1290 aaPredicted RBP14.2□□□□□ -0.14
VPS11-202ENST00000526829 GRIPAP1Q4V328 841 aa14.2□□□□□ -0.14
VPS11-202ENST00000526829 NUDCQ9Y266 331 aa14.2□□□□□ -0.14
VPS11-202ENST00000526829 PARP3Q9Y6F1 533 aa14.2□□□□□ -0.14
VPS11-202ENST00000526829 DPEP1P16444 411 aa14.19□□□□□ -0.14
VPS11-202ENST00000526829 SLC52A2Q9HAB3 445 aa14.19□□□□□ -0.14
VPS11-202ENST00000526829 ARFGEF1Q9Y6D6 1849 aa14.19□□□□□ -0.14
VPS11-202ENST00000526829 USP42Q9H9J4 1324 aaKnown RBP14.19□□□□□ -0.14
VPS11-202ENST00000526829 INTS5Q6P9B9 1019 aaKnown RBP14.18□□□□□ -0.14
VPS11-202ENST00000526829 WWC1Q8IX03 1113 aa14.18□□□□□ -0.14
VPS11-202ENST00000526829 FAM43AQ8N2R8 423 aa14.18□□□□□ -0.14
VPS11-202ENST00000526829 ZNF526Q8TF50 670 aaPredicted RBP14.18□□□□□ -0.14
VPS11-202ENST00000526829 ZNF592Q92610 1267 aa14.18□□□□□ -0.14
VPS11-202ENST00000526829 CFAP44Q96MT7 982 aa14.18□□□□□ -0.14
VPS11-202ENST00000526829 PRDM10Q9NQV6 1147 aa14.18□□□□□ -0.14
VPS11-202ENST00000526829 LGR6Q9HBX8 967 aa14.18□□□□□ -0.14
VPS11-202ENST00000526829 SRP68Q9UHB9 627 aaKnown RBP14.18□□□□□ -0.14
VPS11-202ENST00000526829 BCS1LQ9Y276 419 aa14.18□□□□□ -0.14
VPS11-202ENST00000526829 KCPQ6ZWJ8 1503 aa14.17□□□□□ -0.14
VPS11-202ENST00000526829 RNMTO43148 476 aaKnown RBP14.17□□□□□ -0.14
VPS11-202ENST00000526829 KCNA3P22001 575 aa14.17□□□□□ -0.14
VPS11-202ENST00000526829 KIF3CO14782 793 aa14.16□□□□□ -0.14
VPS11-202ENST00000526829 DDR1Q08345 913 aa14.16□□□□□ -0.14
VPS11-202ENST00000526829 DNAJC10Q8IXB1 793 aa14.16□□□□□ -0.14
VPS11-202ENST00000526829 KCNG1Q9UIX4 513 aa14.16□□□□□ -0.14
VPS11-202ENST00000526829 COL3A1P02461 1466 aaPredicted RBP14.16□□□□□ -0.14
VPS11-202ENST00000526829 HMOX1P09601 288 aa14.16□□□□□ -0.14
VPS11-202ENST00000526829 SOS1Q07889 1333 aaPredicted RBP14.16□□□□□ -0.14
VPS11-202ENST00000526829 UBR2Q8IWV8 1755 aa14.16□□□□□ -0.14
VPS11-202ENST00000526829 NPC1L1Q9UHC9 1359 aa14.15□□□□□ -0.14
VPS11-202ENST00000526829 HSPA6P17066 643 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms