RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 ZEB2O60315 1214 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 ZBTB17Q13105 803 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 STX1AQ16623 288 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 GTF3C6Q969F1 213 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 DDX58O95786 925 aaKnown RBP8.89□□□□□ -0.99
LRRK1-205ENST00000526457 LARP1Q6PKG0 1096 aaKnown RBP8.89□□□□□ -0.99
LRRK1-205ENST00000526457 ZNF428Q96B54 188 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 POTEJP0CG39 1038 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 MATR3P43243 847 aaKnown RBP eCLIP8.89□□□□□ -0.99
LRRK1-205ENST00000526457 FLIIQ13045 1269 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 NOLC1Q14978 699 aaKnown RBP eCLIP8.89□□□□□ -0.99
LRRK1-205ENST00000526457 TSNAXIP1Q2TAA8 658 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 KLHL10Q6JEL2 608 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 POTEDQ86YR6 584 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 THOC2Q8NI27 1593 aaKnown RBP8.89□□□□□ -0.99
LRRK1-205ENST00000526457 CCDC96Q2M329 555 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 GOLGA1Q92805 767 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 RNF216Q9NWF9 866 aaPredicted RBP8.89□□□□□ -0.99
LRRK1-205ENST00000526457 MACROD2A1Z1Q3 448 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 GBP1P32455 592 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 PPP1R12CQ9BZL4 782 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 ST20-MTHFSA0A0A6YYL1 179 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 UBTFL1P0CB47 393 aaPredicted RBP8.89□□□□□ -0.99
LRRK1-205ENST00000526457 FKBP15Q5T1M5 1219 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 CFAP58Q5T655 872 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 RIPK4P57078 832 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 WWC2Q6AWC2 1192 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 RUNDC1Q96C34 613 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 SYNJ1O43426 1573 aa8.89□□□□□ -0.99
LRRK1-205ENST00000526457 YEATS4O95619 227 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 CACNA2D3Q8IZS8 1091 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 SETD1BQ9UPS6 1966 aaKnown RBP8.88□□□□□ -0.99
LRRK1-205ENST00000526457 ATP6V1AP38606 617 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 CPLX4Q7Z7G2 160 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 JADE2Q9NQC1 790 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 PPFIBP2Q8ND30 876 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 EHBP1Q8NDI1 1231 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 STMN2Q93045 179 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 NEUROD6Q96NK8 337 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 C1orf141Q5JVX7 400 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 CCDC129Q6ZRS4 1044 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 STMN4Q9H169 189 aaPredicted RBP8.88□□□□□ -0.99
LRRK1-205ENST00000526457 FAM76AQ8TAV0 307 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 NOL7Q9UMY1 257 aaKnown RBP8.88□□□□□ -0.99
LRRK1-205ENST00000526457 IKBKGQ9Y6K9 419 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 GAPVD1Q14C86 1478 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 BIVM-ERCC5R4GMW8 1640 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 CTAGE5O15320 804 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 INPP5BP32019 993 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 EIF2AK4Q9P2K8 1649 aaKnown RBP8.88□□□□□ -0.99
LRRK1-205ENST00000526457 MAP3K9P80192 1104 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 DIXDC1Q155Q3 683 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 IFT74Q96LB3 600 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 TTC14Q96N46 770 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 DHX29Q7Z478 1369 aaKnown RBP8.88□□□□□ -0.99
LRRK1-205ENST00000526457 NBPF8Q3BBV2 869 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 KLHL34Q8N239 644 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.88□□□□□ -0.99
LRRK1-205ENST00000526457 FGD5Q6ZNL6 1462 aa8.88□□□□□ -0.99
LRRK1-205ENST00000526457 ZSCAN31Q96LW9 406 aaPredicted RBP8.88□□□□□ -0.99
LRRK1-205ENST00000526457 CFAP43Q8NDM7 1665 aa8.87□□□□□ -0.99
LRRK1-205ENST00000526457 TTC36A6NLP5 189 aa8.87□□□□□ -0.99
LRRK1-205ENST00000526457 TNPO1Q92973 898 aaKnown RBP8.87□□□□□ -0.99
LRRK1-205ENST00000526457 SREK1Q8WXA9 508 aaKnown RBP8.87□□□□□ -0.99
LRRK1-205ENST00000526457 TSPYL2Q9H2G4 693 aaPredicted RBP8.87□□□□□ -0.99
LRRK1-205ENST00000526457 HMGXB3Q12766 1538 aa8.87□□□□□ -0.99
LRRK1-205ENST00000526457 CASQ2O14958 399 aaPredicted RBP8.87□□□□□ -0.99
LRRK1-205ENST00000526457 CACNA2D4Q7Z3S7 1137 aa8.87□□□□□ -0.99
LRRK1-205ENST00000526457 CDKL5O76039 1030 aa8.87□□□□□ -0.99
LRRK1-205ENST00000526457 TPD52P55327 224 aaPredicted RBP8.87□□□□□ -0.99
LRRK1-205ENST00000526457 GABPB1Q06547 395 aaPredicted RBP8.87□□□□□ -0.99
LRRK1-205ENST00000526457 SLU7O95391 586 aaKnown RBP8.87□□□□□ -0.99
LRRK1-205ENST00000526457 TEFQ10587 303 aa8.87□□□□□ -0.99
LRRK1-205ENST00000526457 DBN1Q16643 649 aa8.87□□□□□ -0.99
LRRK1-205ENST00000526457 WHAMMQ8TF30 809 aa8.87□□□□□ -0.99
LRRK1-205ENST00000526457 CKAP2LQ8IYA6 745 aa8.87□□□□□ -0.99
LRRK1-205ENST00000526457 DDX27Q96GQ7 796 aaKnown RBP8.87□□□□□ -0.99
LRRK1-205ENST00000526457 GBP5Q96PP8 586 aa8.87□□□□□ -0.99
LRRK1-205ENST00000526457 BMP2KQ9NSY1 1161 aaPredicted RBP8.87□□□□□ -0.99
LRRK1-205ENST00000526457 CIB2O75838 187 aa8.87□□□□□ -0.99
LRRK1-205ENST00000526457 IKQ13123 557 aaPredicted RBP8.87□□□□□ -0.99
LRRK1-205ENST00000526457 VCX3BQ9H321 246 aa8.87□□□□□ -0.99
LRRK1-205ENST00000526457 PDRG1Q9NUG6 133 aa8.87□□□□□ -0.99
LRRK1-205ENST00000526457 SAMD15Q9P1V8 674 aa8.87□□□□□ -0.99
LRRK1-205ENST00000526457 FAM160A1Q05DH4 1040 aa8.87□□□□□ -0.99
LRRK1-205ENST00000526457 MORC4Q8TE76 937 aa8.87□□□□□ -0.99
LRRK1-205ENST00000526457 ZNF830Q96NB3 372 aaPredicted RBP8.86□□□□□ -0.99
LRRK1-205ENST00000526457 PPP1R1BQ9UD71 204 aaPredicted RBP8.86□□□□□ -0.99
LRRK1-205ENST00000526457 SLC3A2P08195 630 aaKnown RBP8.86□□□□□ -0.99
LRRK1-205ENST00000526457 TPX2Q9ULW0 747 aaKnown RBP8.86□□□□□ -0.99
LRRK1-205ENST00000526457 FANCD2Q9BXW9 1451 aa8.86□□□□□ -0.99
LRRK1-205ENST00000526457 UVSSAQ2YD98 709 aa8.86□□□□□ -0.99
LRRK1-205ENST00000526457 AQRO60306 1485 aaKnown RBP eCLIP8.86□□□□□ -0.99
LRRK1-205ENST00000526457 SSFA2P28290 1259 aa8.86□□□□□ -0.99
LRRK1-205ENST00000526457 PRPF4BQ13523 1007 aaKnown RBP8.86□□□□□ -0.99
LRRK1-205ENST00000526457 NCOA2Q15596 1464 aa8.86□□□□□ -0.99
LRRK1-205ENST00000526457 CCDC141Q6ZP82 1450 aa8.86□□□□□ -0.99
LRRK1-205ENST00000526457 CCDC38Q502W7 563 aa8.86□□□□□ -0.99
LRRK1-205ENST00000526457 SCAND2PQ9GZW5 306 aaPredicted RBP8.86□□□□□ -0.99
LRRK1-205ENST00000526457 GCC1Q96CN9 775 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms