RNA–Protein interactions for RNA: ENST00000526245.1

ATXN3-213, Transcript of ataxin 3, humanhuman

TSL 3

Gene ATXN3, Length 352 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-213ENST00000526245 CNKSR1Q969H4 720 aa6.7□□□□□ -1.34
ATXN3-213ENST00000526245 KIFC2Q96AC6 838 aa6.7□□□□□ -1.34
ATXN3-213ENST00000526245 PRIMPOLQ96LW4 560 aa6.7□□□□□ -1.34
ATXN3-213ENST00000526245 ESYT1Q9BSJ8 1104 aa6.7□□□□□ -1.34
ATXN3-213ENST00000526245 TMEM229AB2RXF0 380 aa6.69□□□□□ -1.34
ATXN3-213ENST00000526245 MAN1A2O60476 641 aa6.69□□□□□ -1.34
ATXN3-213ENST00000526245 ICMTO60725 284 aa6.69□□□□□ -1.34
ATXN3-213ENST00000526245 INHAP05111 366 aa6.69□□□□□ -1.34
ATXN3-213ENST00000526245 COL19A1Q14993 1142 aa6.69□□□□□ -1.34
ATXN3-213ENST00000526245 TAS1R3Q7RTX0 852 aa6.69□□□□□ -1.34
ATXN3-213ENST00000526245 XAGE2Q96GT9 111 aa6.69□□□□□ -1.34
ATXN3-213ENST00000526245 FIGNL2A6NMB9 653 aa6.68□□□□□ -1.34
ATXN3-213ENST00000526245 SOBPA7XYQ1 873 aa6.68□□□□□ -1.34
ATXN3-213ENST00000526245 SCNN1AP37088 669 aa6.68□□□□□ -1.34
ATXN3-213ENST00000526245 FBXO33Q7Z6M2 555 aa6.68□□□□□ -1.34
ATXN3-213ENST00000526245 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.68□□□□□ -1.34
ATXN3-213ENST00000526245 RNF217Q8TC41 542 aa6.68□□□□□ -1.34
ATXN3-213ENST00000526245 ASB16Q96NS5 453 aa6.68□□□□□ -1.34
ATXN3-213ENST00000526245 CXXC1Q9P0U4 656 aaPredicted RBP6.68□□□□□ -1.34
ATXN3-213ENST00000526245 SERTAD1Q9UHV2 236 aa6.68□□□□□ -1.34
ATXN3-213ENST00000526245 DNMT3LQ9UJW3 386 aa6.68□□□□□ -1.34
ATXN3-213ENST00000526245 HRH3Q9Y5N1 445 aa6.68□□□□□ -1.34
ATXN3-213ENST00000526245 WASLO00401 505 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-213ENST00000526245 LGR5O75473 907 aa6.67□□□□□ -1.34
ATXN3-213ENST00000526245 MAPK1P28482 360 aa6.67□□□□□ -1.34
ATXN3-213ENST00000526245 RNF144AP50876 292 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-213ENST00000526245 CENPCQ03188 943 aa6.67□□□□□ -1.34
ATXN3-213ENST00000526245 SLC27A3Q5K4L6 730 aa6.67□□□□□ -1.34
ATXN3-213ENST00000526245 ZNF787Q6DD87 383 aa6.67□□□□□ -1.34
ATXN3-213ENST00000526245 GLYCTKQ8IVS8 523 aa6.67□□□□□ -1.34
ATXN3-213ENST00000526245 ZSCAN29Q8IWY8 852 aaPredicted RBP6.67□□□□□ -1.34
ATXN3-213ENST00000526245 ZNF358Q9NW07 568 aa6.67□□□□□ -1.34
ATXN3-213ENST00000526245 DCTN4Q9UJW0 460 aa6.67□□□□□ -1.34
ATXN3-213ENST00000526245 H3BRB1 525 aa6.66□□□□□ -1.34
ATXN3-213ENST00000526245 DKK1O94907 266 aa6.66□□□□□ -1.34
ATXN3-213ENST00000526245 GPC1P35052 558 aa6.66□□□□□ -1.34
ATXN3-213ENST00000526245 TLR1Q15399 786 aa6.66□□□□□ -1.34
ATXN3-213ENST00000526245 SF3A1Q15459 793 aaKnown RBP6.66□□□□□ -1.34
ATXN3-213ENST00000526245 UBXN4Q92575 508 aa6.66□□□□□ -1.34
ATXN3-213ENST00000526245 FHDC1Q9C0D6 1143 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-213ENST00000526245 TUT1Q9H6E5 874 aaKnown RBP6.66□□□□□ -1.34
ATXN3-213ENST00000526245 BACH1O14867 736 aa6.65□□□□□ -1.34
ATXN3-213ENST00000526245 C21orf2O43822 256 aa6.65□□□□□ -1.34
ATXN3-213ENST00000526245 OCLNQ16625 522 aa6.65□□□□□ -1.34
ATXN3-213ENST00000526245 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.65□□□□□ -1.34
ATXN3-213ENST00000526245 NAALADL2Q58DX5 795 aa6.65□□□□□ -1.34
ATXN3-213ENST00000526245 LYSMD3Q7Z3D4 306 aa6.65□□□□□ -1.34
ATXN3-213ENST00000526245 PRICKLE2Q7Z3G6 844 aa6.65□□□□□ -1.34
ATXN3-213ENST00000526245 VTI1AQ96AJ9 217 aa6.65□□□□□ -1.34
ATXN3-213ENST00000526245 SLC4A9Q96Q91 983 aa6.65□□□□□ -1.34
ATXN3-213ENST00000526245 ZSCAN10Q96SZ4 725 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-213ENST00000526245 MKNK1Q9BUB5 465 aa6.65□□□□□ -1.34
ATXN3-213ENST00000526245 GRIP2Q9C0E4 1043 aa6.65□□□□□ -1.34
ATXN3-213ENST00000526245 RECKO95980 971 aa6.64□□□□□ -1.35
ATXN3-213ENST00000526245 SMTNP53814 917 aa6.64□□□□□ -1.35
ATXN3-213ENST00000526245 TAGLNQ01995 201 aaKnown RBP6.64□□□□□ -1.35
ATXN3-213ENST00000526245 FKBP4Q02790 459 aaKnown RBP eCLIP6.64□□□□□ -1.35
ATXN3-213ENST00000526245 ZNF211Q13398 564 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-213ENST00000526245 SF3B2Q13435 895 aaKnown RBP6.64□□□□□ -1.35
ATXN3-213ENST00000526245 TSEN2Q8NCE0 465 aaKnown RBP6.64□□□□□ -1.35
ATXN3-213ENST00000526245 ANO2Q9NQ90 1003 aa6.64□□□□□ -1.35
ATXN3-213ENST00000526245 A6NJY4 79 aa6.63□□□□□ -1.35
ATXN3-213ENST00000526245 PTCD1O75127 700 aaKnown RBP6.63□□□□□ -1.35
ATXN3-213ENST00000526245 GTF2E1P29083 439 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-213ENST00000526245 EAPPQ56P03 285 aaPredicted RBP6.63□□□□□ -1.35
ATXN3-213ENST00000526245 TMEM214Q6NUQ4 689 aaKnown RBP6.63□□□□□ -1.35
ATXN3-213ENST00000526245 TNS4Q8IZW8 715 aa6.63□□□□□ -1.35
ATXN3-213ENST00000526245 SPATA32Q96LK8 384 aa6.63□□□□□ -1.35
ATXN3-213ENST00000526245 M0R2N6 131 aa6.62□□□□□ -1.35
ATXN3-213ENST00000526245 RHOQP17081 205 aa6.62□□□□□ -1.35
ATXN3-213ENST00000526245 EPHA4P54764 986 aa6.62□□□□□ -1.35
ATXN3-213ENST00000526245 POU4F2Q12837 409 aa6.62□□□□□ -1.35
ATXN3-213ENST00000526245 MTFR1Q15390 333 aa6.62□□□□□ -1.35
ATXN3-213ENST00000526245 ECM1Q16610 540 aa6.62□□□□□ -1.35
ATXN3-213ENST00000526245 TSNAXIP1Q2TAA8 658 aa6.62□□□□□ -1.35
ATXN3-213ENST00000526245 PPARGC1BQ86YN6 1023 aaKnown RBP6.62□□□□□ -1.35
ATXN3-213ENST00000526245 GTF3C2Q8WUA4 911 aaPredicted RBP6.62□□□□□ -1.35
ATXN3-213ENST00000526245 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.62□□□□□ -1.35
ATXN3-213ENST00000526245 USP3Q9Y6I4 520 aa6.62□□□□□ -1.35
ATXN3-213ENST00000526245 CADPSQ9ULU8 1353 aa6.61□□□□□ -1.35
ATXN3-213ENST00000526245 SPATA31C2B4DYI2 1134 aa6.61□□□□□ -1.35
ATXN3-213ENST00000526245 ERCC5P28715 1186 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-213ENST00000526245 PTSQ03393 145 aa6.61□□□□□ -1.35
ATXN3-213ENST00000526245 GNASQ5JWF2 1037 aa6.61□□□□□ -1.35
ATXN3-213ENST00000526245 NBPF10Q6P3W6 841 aaKnown RBP6.61□□□□□ -1.35
ATXN3-213ENST00000526245 RGL4Q8IZJ4 473 aa6.61□□□□□ -1.35
ATXN3-213ENST00000526245 NBPF15Q8N660 670 aa6.61□□□□□ -1.35
ATXN3-213ENST00000526245 CHMP7Q8WUX9 453 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-213ENST00000526245 SCHIP1Q9P0W5 487 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-213ENST00000526245 PPP1R1BQ9UD71 204 aaPredicted RBP6.61□□□□□ -1.35
ATXN3-213ENST00000526245 CDK2AP1O14519 115 aa6.6□□□□□ -1.35
ATXN3-213ENST00000526245 SMARCA5O60264 1052 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-213ENST00000526245 PHKA2P46019 1235 aa6.6□□□□□ -1.35
ATXN3-213ENST00000526245 ARHGAP4P98171 946 aa6.6□□□□□ -1.35
ATXN3-213ENST00000526245 FOXK2Q01167 660 aa6.6□□□□□ -1.35
ATXN3-213ENST00000526245 NAA30Q147X3 362 aaPredicted RBP6.6□□□□□ -1.35
ATXN3-213ENST00000526245 C4orf17Q53FE4 359 aa6.6□□□□□ -1.35
ATXN3-213ENST00000526245 TBCELQ5QJ74 424 aa6.6□□□□□ -1.35
ATXN3-213ENST00000526245 RHBDD1Q8TEB9 315 aa6.6□□□□□ -1.35
ATXN3-213ENST00000526245 SCG3Q8WXD2 468 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms