RNA–Protein interactions for RNA: ENST00000525617.2

LRRK1-204, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 5

Gene LRRK1, Length 614 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-204ENST00000525617 NLGN1Q8N2Q7 840 aa18.95■□□□□ 0.62
LRRK1-204ENST00000525617 KCNQ3O43525 872 aa18.94■□□□□ 0.62
LRRK1-204ENST00000525617 NEUROD2Q15784 382 aa18.93■□□□□ 0.62
LRRK1-204ENST00000525617 THUMPD2Q9BTF0 503 aaKnown RBP18.93■□□□□ 0.62
LRRK1-204ENST00000525617 ZBTB1Q9Y2K1 713 aa18.93■□□□□ 0.62
LRRK1-204ENST00000525617 ZPR1O75312 459 aa18.92■□□□□ 0.62
LRRK1-204ENST00000525617 SNRPA1P09661 255 aaKnown RBP18.92■□□□□ 0.62
LRRK1-204ENST00000525617 CANXP27824 592 aaKnown RBP18.92■□□□□ 0.62
LRRK1-204ENST00000525617 NPM2Q86SE8 214 aaKnown RBP18.92■□□□□ 0.62
LRRK1-204ENST00000525617 MIS18AQ9NYP9 233 aa18.92■□□□□ 0.62
LRRK1-204ENST00000525617 RRP7AQ9Y3A4 280 aaKnown RBP18.92■□□□□ 0.62
LRRK1-204ENST00000525617 SOS1Q07889 1333 aaPredicted RBP18.92■□□□□ 0.62
LRRK1-204ENST00000525617 C4AP0C0L4 1744 aa18.91■□□□□ 0.62
LRRK1-204ENST00000525617 GYS1P13807 737 aa18.91■□□□□ 0.62
LRRK1-204ENST00000525617 MMP10P09238 476 aa18.9■□□□□ 0.62
LRRK1-204ENST00000525617 USP42Q9H9J4 1324 aaKnown RBP18.9■□□□□ 0.62
LRRK1-204ENST00000525617 COL15A1P39059 1388 aa18.9■□□□□ 0.62
LRRK1-204ENST00000525617 A0A087WZG4 1122 aa18.89■□□□□ 0.61
LRRK1-204ENST00000525617 MRS2Q9HD23 443 aa18.89■□□□□ 0.61
LRRK1-204ENST00000525617 SRP68Q9UHB9 627 aaKnown RBP18.89■□□□□ 0.61
LRRK1-204ENST00000525617 CCDC184Q52MB2 194 aa18.88■□□□□ 0.61
LRRK1-204ENST00000525617 ZNF330Q9Y3S2 320 aaPredicted RBP18.88■□□□□ 0.61
LRRK1-204ENST00000525617 CD2APQ9Y5K6 639 aa18.88■□□□□ 0.61
LRRK1-204ENST00000525617 USP16Q9Y5T5 823 aa18.88■□□□□ 0.61
LRRK1-204ENST00000525617 A1BGP04217 495 aa18.87■□□□□ 0.61
LRRK1-204ENST00000525617 IL6STP40189 918 aaPredicted RBP18.87■□□□□ 0.61
LRRK1-204ENST00000525617 EIF5P55010 431 aaKnown RBP18.87■□□□□ 0.61
LRRK1-204ENST00000525617 KDM3BQ7LBC6 1761 aa18.87■□□□□ 0.61
LRRK1-204ENST00000525617 BABAM1Q9NWV8 329 aa18.87■□□□□ 0.61
LRRK1-204ENST00000525617 NARFQ9UHQ1 456 aa18.87■□□□□ 0.61
LRRK1-204ENST00000525617 TSPYL4Q9UJ04 414 aa18.87■□□□□ 0.61
LRRK1-204ENST00000525617 PARP3Q9Y6F1 533 aa18.87■□□□□ 0.61
LRRK1-204ENST00000525617 USPL1Q5W0Q7 1092 aa18.86■□□□□ 0.61
LRRK1-204ENST00000525617 PRAMEF22A3QJZ6 481 aa18.85■□□□□ 0.61
LRRK1-204ENST00000525617 APAF1O14727 1248 aa18.85■□□□□ 0.61
LRRK1-204ENST00000525617 EIF4A1P60842 406 aaKnown RBP18.85■□□□□ 0.61
LRRK1-204ENST00000525617 FKBP8Q14318 412 aa18.85■□□□□ 0.61
LRRK1-204ENST00000525617 TRIM35Q9UPQ4 493 aa18.85■□□□□ 0.61
LRRK1-204ENST00000525617 NLGN2Q8NFZ4 835 aa18.84■□□□□ 0.61
LRRK1-204ENST00000525617 GIGYF1O75420 1035 aaPredicted RBP18.83■□□□□ 0.6
LRRK1-204ENST00000525617 LAS1LQ9Y4W2 734 aaKnown RBP18.83■□□□□ 0.6
LRRK1-204ENST00000525617 GPR162Q16538 588 aa18.82■□□□□ 0.6
LRRK1-204ENST00000525617 LAMB4A4D0S4 1761 aa18.81■□□□□ 0.6
LRRK1-204ENST00000525617 CALD1Q05682 793 aaKnown RBP18.81■□□□□ 0.6
LRRK1-204ENST00000525617 PELP1Q8IZL8 1130 aaKnown RBP18.81■□□□□ 0.6
LRRK1-204ENST00000525617 TBC1D2BQ9UPU7 963 aa18.81■□□□□ 0.6
LRRK1-204ENST00000525617 TM4SF1P30408 202 aa18.8■□□□□ 0.6
LRRK1-204ENST00000525617 PIP4K2AP48426 406 aaPredicted RBP18.8■□□□□ 0.6
LRRK1-204ENST00000525617 DZIP3Q86Y13 1208 aaKnown RBP18.8■□□□□ 0.6
LRRK1-204ENST00000525617 CHL1O00533 1208 aa18.79■□□□□ 0.6
LRRK1-204ENST00000525617 TGFB2P61812 414 aa18.78■□□□□ 0.6
LRRK1-204ENST00000525617 DDR1Q08345 913 aa18.78■□□□□ 0.6
LRRK1-204ENST00000525617 NFIXQ14938 502 aa18.78■□□□□ 0.6
LRRK1-204ENST00000525617 CFAP44Q96MT7 982 aa18.78■□□□□ 0.6
LRRK1-204ENST00000525617 BCL2L12Q9HB09 334 aa18.78■□□□□ 0.6
LRRK1-204ENST00000525617 NBPF26B4DH59 902 aa18.77■□□□□ 0.6
LRRK1-204ENST00000525617 POLRMTO00411 1230 aaKnown RBP18.77■□□□□ 0.6
LRRK1-204ENST00000525617 NBPF10Q6P3W6 841 aaKnown RBP18.77■□□□□ 0.6
LRRK1-204ENST00000525617 BICDL1Q6ZP65 573 aa18.77■□□□□ 0.6
LRRK1-204ENST00000525617 NBPF15Q8N660 670 aa18.77■□□□□ 0.6
LRRK1-204ENST00000525617 C10orf71Q711Q0 1435 aa18.76■□□□□ 0.59
LRRK1-204ENST00000525617 ZNF652Q9Y2D9 606 aa18.76■□□□□ 0.59
LRRK1-204ENST00000525617 SCN7AQ01118 1682 aa18.76■□□□□ 0.59
LRRK1-204ENST00000525617 ERBB4Q15303 1308 aa18.75■□□□□ 0.59
LRRK1-204ENST00000525617 KIF13BQ9NQT8 1826 aa18.75■□□□□ 0.59
LRRK1-204ENST00000525617 CAMTA2O94983 1202 aa18.75■□□□□ 0.59
LRRK1-204ENST00000525617 SERPINB2P05120 415 aa18.75■□□□□ 0.59
LRRK1-204ENST00000525617 EIF2S2P20042 333 aaKnown RBP18.75■□□□□ 0.59
LRRK1-204ENST00000525617 GRIN3BO60391 1043 aa18.74■□□□□ 0.59
LRRK1-204ENST00000525617 MYL6BP14649 208 aa18.74■□□□□ 0.59
LRRK1-204ENST00000525617 GNAI1P63096 354 aa18.74■□□□□ 0.59
LRRK1-204ENST00000525617 TBC1D9BQ66K14 1250 aa18.74■□□□□ 0.59
LRRK1-204ENST00000525617 CLEC4GQ6UXB4 293 aa18.74■□□□□ 0.59
LRRK1-204ENST00000525617 FAM9BQ8IZU0 186 aa18.74■□□□□ 0.59
LRRK1-204ENST00000525617 NGEFQ8N5V2 710 aa18.74■□□□□ 0.59
LRRK1-204ENST00000525617 SETDB2Q96T68 719 aa18.74■□□□□ 0.59
LRRK1-204ENST00000525617 IFT57Q9NWB7 429 aa18.74■□□□□ 0.59
LRRK1-204ENST00000525617 CCDC27Q2M243 656 aa18.73■□□□□ 0.59
LRRK1-204ENST00000525617 RGL2O15211 777 aa18.72■□□□□ 0.59
LRRK1-204ENST00000525617 MBIPQ9NS73 344 aa18.72■□□□□ 0.59
LRRK1-204ENST00000525617 BCORQ6W2J9 1755 aa18.72■□□□□ 0.59
LRRK1-204ENST00000525617 CARMIL3Q8ND23 1372 aa18.71■□□□□ 0.59
LRRK1-204ENST00000525617 A0A0G2JLW4 131 aa18.71■□□□□ 0.59
LRRK1-204ENST00000525617 NPHP1O15259 732 aa18.71■□□□□ 0.59
LRRK1-204ENST00000525617 ZNF853P0CG23 659 aa18.71■□□□□ 0.59
LRRK1-204ENST00000525617 NCBP3Q53F19 620 aaKnown RBP18.71■□□□□ 0.59
LRRK1-204ENST00000525617 KIF6Q6ZMV9 814 aa18.71■□□□□ 0.59
LRRK1-204ENST00000525617 AFDNP55196 1824 aaKnown RBP18.71■□□□□ 0.59
LRRK1-204ENST00000525617 PXDNLA1KZ92 1463 aa18.71■□□□□ 0.59
LRRK1-204ENST00000525617 HOXB7P09629 217 aa18.7■□□□□ 0.58
LRRK1-204ENST00000525617 YBX3P16989 372 aaKnown RBP eCLIP18.7■□□□□ 0.58
LRRK1-204ENST00000525617 YY1P25490 414 aa18.7■□□□□ 0.58
LRRK1-204ENST00000525617 WWC1Q8IX03 1113 aa18.7■□□□□ 0.58
LRRK1-204ENST00000525617 WWC3Q9ULE0 1092 aa18.7■□□□□ 0.58
LRRK1-204ENST00000525617 N4BP2Q86UW6 1770 aaPredicted RBP18.7■□□□□ 0.58
LRRK1-204ENST00000525617 NRXN2Q9P2S2 1712 aa18.69■□□□□ 0.58
LRRK1-204ENST00000525617 SENP3-EIF4A1A0A087X0R7 540 aa18.69■□□□□ 0.58
LRRK1-204ENST00000525617 ERVV-1B6SEH8 477 aa18.69■□□□□ 0.58
LRRK1-204ENST00000525617 DPEP1P16444 411 aa18.69■□□□□ 0.58
LRRK1-204ENST00000525617 KRT24Q2M2I5 525 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms