RNA–Protein interactions for RNA: ENST00000525599.1

CCDC17-208, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,403 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-208ENST00000525599 MYH14Q7Z406 1995 aaKnown RBP28.63■■■□□ 2.17
CCDC17-208ENST00000525599 CCDC87Q9NVE4 849 aa28.63■■■□□ 2.17
CCDC17-208ENST00000525599 ZBED9Q6R2W3 1325 aa28.63■■■□□ 2.17
CCDC17-208ENST00000525599 UBR3Q6ZT12 1888 aa28.63■■■□□ 2.17
CCDC17-208ENST00000525599 TSR2Q969E8 191 aaKnown RBP28.62■■■□□ 2.17
CCDC17-208ENST00000525599 FLAD1Q8NFF5 587 aa28.61■■■□□ 2.17
CCDC17-208ENST00000525599 SPINK5Q9NQ38 1064 aaPredicted RBP28.61■■■□□ 2.17
CCDC17-208ENST00000525599 TFCP2L1Q9NZI6 479 aa28.61■■■□□ 2.17
CCDC17-208ENST00000525599 USP16Q9Y5T5 823 aa28.61■■■□□ 2.17
CCDC17-208ENST00000525599 INTS5Q6P9B9 1019 aaKnown RBP28.6■■■□□ 2.17
CCDC17-208ENST00000525599 CHMP4AQ9BY43 222 aa28.6■■■□□ 2.17
CCDC17-208ENST00000525599 PRAMEF22A3QJZ6 481 aa28.6■■■□□ 2.17
CCDC17-208ENST00000525599 GNPATO15228 680 aa28.6■■■□□ 2.17
CCDC17-208ENST00000525599 SSFA2P28290 1259 aa28.6■■■□□ 2.17
CCDC17-208ENST00000525599 SLFN5Q08AF3 891 aa28.6■■■□□ 2.17
CCDC17-208ENST00000525599 ERBB4Q15303 1308 aa28.59■■■□□ 2.17
CCDC17-208ENST00000525599 TUBGCP6Q96RT7 1819 aa28.59■■■□□ 2.17
CCDC17-208ENST00000525599 RPS6KA4O75676 772 aa28.59■■■□□ 2.17
CCDC17-208ENST00000525599 ADRA2BP18089 450 aa28.59■■■□□ 2.17
CCDC17-208ENST00000525599 RTCBQ9Y3I0 505 aaKnown RBP28.59■■■□□ 2.17
CCDC17-208ENST00000525599 DUSP27Q5VZP5 1158 aa28.58■■■□□ 2.17
CCDC17-208ENST00000525599 KRT24Q2M2I5 525 aa28.57■■■□□ 2.16
CCDC17-208ENST00000525599 R3HDM1Q15032 1099 aaKnown RBP28.56■■■□□ 2.16
CCDC17-208ENST00000525599 TRMT2AQ8IZ69 625 aaKnown RBP28.56■■■□□ 2.16
CCDC17-208ENST00000525599 ZBTB1Q9Y2K1 713 aa28.56■■■□□ 2.16
CCDC17-208ENST00000525599 C8orf58Q8NAV2 365 aa28.55■■■□□ 2.16
CCDC17-208ENST00000525599 PNPLA7Q6ZV29 1317 aa28.55■■■□□ 2.16
CCDC17-208ENST00000525599 IL6STP40189 918 aaPredicted RBP28.54■■■□□ 2.16
CCDC17-208ENST00000525599 A1BGP04217 495 aa28.53■■■□□ 2.16
CCDC17-208ENST00000525599 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.52■■■□□ 2.16
CCDC17-208ENST00000525599 CDCA7LQ96GN5 454 aa28.52■■■□□ 2.16
CCDC17-208ENST00000525599 EIF5P55010 431 aaKnown RBP28.52■■■□□ 2.16
CCDC17-208ENST00000525599 TWISTNBQ3B726 338 aaPredicted RBP28.52■■■□□ 2.16
CCDC17-208ENST00000525599 TRAPPC3LQ5T215 181 aa28.52■■■□□ 2.16
CCDC17-208ENST00000525599 HDGFL1Q5TGJ6 251 aa28.52■■■□□ 2.16
CCDC17-208ENST00000525599 CASZ1Q86V15 1759 aa28.51■■■□□ 2.15
CCDC17-208ENST00000525599 CANXP27824 592 aaKnown RBP28.51■■■□□ 2.15
CCDC17-208ENST00000525599 EXOSC9Q06265 439 aaKnown RBP28.51■■■□□ 2.15
CCDC17-208ENST00000525599 EIF2S2P20042 333 aaKnown RBP28.5■■■□□ 2.15
CCDC17-208ENST00000525599 AMIGO3Q86WK7 504 aa28.5■■■□□ 2.15
CCDC17-208ENST00000525599 TSPYL6Q8N831 410 aa28.5■■■□□ 2.15
CCDC17-208ENST00000525599 COL15A1P39059 1388 aa28.49■■■□□ 2.15
CCDC17-208ENST00000525599 A0A087WZG4 1122 aa28.49■■■□□ 2.15
CCDC17-208ENST00000525599 PSDA5PKW4 1024 aaPredicted RBP28.49■■■□□ 2.15
CCDC17-208ENST00000525599 NBPF26B4DH59 902 aa28.49■■■□□ 2.15
CCDC17-208ENST00000525599 ELL2O00472 640 aaPredicted RBP28.49■■■□□ 2.15
CCDC17-208ENST00000525599 NBPF10Q6P3W6 841 aaKnown RBP28.49■■■□□ 2.15
CCDC17-208ENST00000525599 NPM2Q86SE8 214 aaKnown RBP28.49■■■□□ 2.15
CCDC17-208ENST00000525599 NBPF15Q8N660 670 aa28.49■■■□□ 2.15
CCDC17-208ENST00000525599 SLC16A10Q8TF71 515 aa28.49■■■□□ 2.15
CCDC17-208ENST00000525599 PHF14O94880 888 aa28.48■■■□□ 2.15
CCDC17-208ENST00000525599 COL23A1Q86Y22 540 aaPredicted RBP28.48■■■□□ 2.15
CCDC17-208ENST00000525599 CCDC30Q5VVM6 783 aa28.47■■■□□ 2.15
CCDC17-208ENST00000525599 DBF4Q9UBU7 674 aaPredicted RBP28.47■■■□□ 2.15
CCDC17-208ENST00000525599 C4AP0C0L4 1744 aa28.47■■■□□ 2.15
CCDC17-208ENST00000525599 ARHGEF1Q92888 912 aaKnown RBP28.46■■■□□ 2.15
CCDC17-208ENST00000525599 DDX21Q9NR30 783 aaKnown RBP eCLIP28.46■■■□□ 2.15
CCDC17-208ENST00000525599 VAMP4O75379 141 aa28.45■■■□□ 2.15
CCDC17-208ENST00000525599 RFC4P35249 363 aa28.45■■■□□ 2.15
CCDC17-208ENST00000525599 PDIA6Q15084 440 aa28.45■■■□□ 2.15
CCDC17-208ENST00000525599 CT47B1P0C2W7 299 aaPredicted RBP28.44■■■□□ 2.14
CCDC17-208ENST00000525599 ZNF428Q96B54 188 aa28.43■■■□□ 2.14
CCDC17-208ENST00000525599 CHPF2Q9P2E5 772 aa28.43■■■□□ 2.14
CCDC17-208ENST00000525599 RGL2O15211 777 aa28.42■■■□□ 2.14
CCDC17-208ENST00000525599 MSH5O43196 834 aa28.42■■■□□ 2.14
CCDC17-208ENST00000525599 PIP4K2AP48426 406 aaPredicted RBP28.42■■■□□ 2.14
CCDC17-208ENST00000525599 LRP10Q7Z4F1 713 aa28.42■■■□□ 2.14
CCDC17-208ENST00000525599 NECTIN2Q92692 538 aa28.42■■■□□ 2.14
CCDC17-208ENST00000525599 HYPKQ9NX55 129 aa28.42■■■□□ 2.14
CCDC17-208ENST00000525599 NARFQ9UHQ1 456 aa28.42■■■□□ 2.14
CCDC17-208ENST00000525599 CACNA1FO60840 1977 aa28.41■■■□□ 2.14
CCDC17-208ENST00000525599 USP42Q9H9J4 1324 aaKnown RBP28.41■■■□□ 2.14
CCDC17-208ENST00000525599 SMIM5Q71RC9 77 aa28.41■■■□□ 2.14
CCDC17-208ENST00000525599 STK31Q9BXU1 1019 aa28.41■■■□□ 2.14
CCDC17-208ENST00000525599 ZNF330Q9Y3S2 320 aaPredicted RBP28.41■■■□□ 2.14
CCDC17-208ENST00000525599 MYL6BP14649 208 aa28.4■■■□□ 2.14
CCDC17-208ENST00000525599 PDGFDQ9GZP0 370 aaPredicted RBP28.4■■■□□ 2.14
CCDC17-208ENST00000525599 MTFR1LQ9H019 292 aa28.4■■■□□ 2.14
CCDC17-208ENST00000525599 ZPR1O75312 459 aa28.39■■■□□ 2.14
CCDC17-208ENST00000525599 PROSER3Q2NL68 480 aa28.38■■■□□ 2.13
CCDC17-208ENST00000525599 DZIP3Q86Y13 1208 aaKnown RBP28.38■■■□□ 2.13
CCDC17-208ENST00000525599 SCN7AQ01118 1682 aa28.38■■■□□ 2.13
CCDC17-208ENST00000525599 COL24A1Q17RW2 1714 aa28.37■■■□□ 2.13
CCDC17-208ENST00000525599 BCORQ6W2J9 1755 aa28.36■■■□□ 2.13
CCDC17-208ENST00000525599 KIF6Q6ZMV9 814 aa28.35■■■□□ 2.13
CCDC17-208ENST00000525599 NLGN1Q8N2Q7 840 aa28.35■■■□□ 2.13
CCDC17-208ENST00000525599 ANXA1P04083 346 aa28.35■■■□□ 2.13
CCDC17-208ENST00000525599 GYS1P13807 737 aa28.35■■■□□ 2.13
CCDC17-208ENST00000525599 TBC1D2BQ9UPU7 963 aa28.35■■■□□ 2.13
CCDC17-208ENST00000525599 ERVV-1B6SEH8 477 aa28.34■■■□□ 2.13
CCDC17-208ENST00000525599 CAMTA2O94983 1202 aa28.34■■■□□ 2.13
CCDC17-208ENST00000525599 USPL1Q5W0Q7 1092 aa28.34■■■□□ 2.13
CCDC17-208ENST00000525599 SRP68Q9UHB9 627 aaKnown RBP28.34■■■□□ 2.13
CCDC17-208ENST00000525599 CLEC4GQ6UXB4 293 aa28.33■■■□□ 2.13
CCDC17-208ENST00000525599 YTHDC1Q96MU7 727 aaKnown RBP28.33■■■□□ 2.13
CCDC17-208ENST00000525599 ZNF652Q9Y2D9 606 aa28.33■■■□□ 2.13
CCDC17-208ENST00000525599 MAP3K15Q6ZN16 1313 aa28.33■■■□□ 2.13
CCDC17-208ENST00000525599 ZBTB7AO95365 584 aa28.32■■■□□ 2.12
CCDC17-208ENST00000525599 ALDH1L2Q3SY69 923 aa28.32■■■□□ 2.12
CCDC17-208ENST00000525599 COPS6Q7L5N1 327 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms