RNA–Protein interactions for RNA: ENST00000525413.5

CHRDL2-204, Transcript of chordin like 2, humanhuman

TSL 5

Gene CHRDL2, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-204ENST00000525413 LINC00116Q8NCU8 138 aa17.82■□□□□ 0.44
CHRDL2-204ENST00000525413 EXOSC9Q06265 439 aaKnown RBP17.81■□□□□ 0.44
CHRDL2-204ENST00000525413 KRT24Q2M2I5 525 aa17.81■□□□□ 0.44
CHRDL2-204ENST00000525413 TWISTNBQ3B726 338 aaPredicted RBP17.81■□□□□ 0.44
CHRDL2-204ENST00000525413 USP16Q9Y5T5 823 aa17.81■□□□□ 0.44
CHRDL2-204ENST00000525413 ERBB4Q15303 1308 aa17.8■□□□□ 0.44
CHRDL2-204ENST00000525413 PRAMEF22A3QJZ6 481 aa17.8■□□□□ 0.44
CHRDL2-204ENST00000525413 CT47B1P0C2W7 299 aaPredicted RBP17.8■□□□□ 0.44
CHRDL2-204ENST00000525413 CRKLP46109 303 aaKnown RBP17.8■□□□□ 0.44
CHRDL2-204ENST00000525413 NBPF14Q5TI25 921 aa17.8■□□□□ 0.44
CHRDL2-204ENST00000525413 CCDC87Q9NVE4 849 aa17.8■□□□□ 0.44
CHRDL2-204ENST00000525413 AK7Q96M32 723 aa17.79■□□□□ 0.44
CHRDL2-204ENST00000525413 ELL2O00472 640 aaPredicted RBP17.78■□□□□ 0.44
CHRDL2-204ENST00000525413 EIF2S2P20042 333 aaKnown RBP17.78■□□□□ 0.44
CHRDL2-204ENST00000525413 HDGFL1Q5TGJ6 251 aa17.78■□□□□ 0.44
CHRDL2-204ENST00000525413 TSPYL6Q8N831 410 aa17.78■□□□□ 0.44
CHRDL2-204ENST00000525413 ZNF428Q96B54 188 aa17.78■□□□□ 0.44
CHRDL2-204ENST00000525413 STK32BQ9NY57 414 aa17.78■□□□□ 0.44
CHRDL2-204ENST00000525413 VAMP4O75379 141 aa17.77■□□□□ 0.44
CHRDL2-204ENST00000525413 CCDC30Q5VVM6 783 aa17.77■□□□□ 0.44
CHRDL2-204ENST00000525413 AKT1S1Q96B36 256 aa17.77■□□□□ 0.44
CHRDL2-204ENST00000525413 RPS6KA4O75676 772 aa17.76■□□□□ 0.43
CHRDL2-204ENST00000525413 SLC15A2Q16348 729 aa17.76■□□□□ 0.43
CHRDL2-204ENST00000525413 INTS5Q6P9B9 1019 aaKnown RBP17.76■□□□□ 0.43
CHRDL2-204ENST00000525413 RTCBQ9Y3I0 505 aaKnown RBP17.76■□□□□ 0.43
CHRDL2-204ENST00000525413 GNPATO15228 680 aa17.75■□□□□ 0.43
CHRDL2-204ENST00000525413 A1BGP04217 495 aa17.75■□□□□ 0.43
CHRDL2-204ENST00000525413 IL6STP40189 918 aaPredicted RBP17.75■□□□□ 0.43
CHRDL2-204ENST00000525413 NPM2Q86SE8 214 aaKnown RBP17.75■□□□□ 0.43
CHRDL2-204ENST00000525413 FLAD1Q8NFF5 587 aa17.75■□□□□ 0.43
CHRDL2-204ENST00000525413 DBF4Q9UBU7 674 aaPredicted RBP17.75■□□□□ 0.43
CHRDL2-204ENST00000525413 ZBTB1Q9Y2K1 713 aa17.75■□□□□ 0.43
CHRDL2-204ENST00000525413 ADRA2BP18089 450 aa17.74■□□□□ 0.43
CHRDL2-204ENST00000525413 SSFA2P28290 1259 aa17.74■□□□□ 0.43
CHRDL2-204ENST00000525413 ZNF827Q17R98 1081 aa17.74■□□□□ 0.43
CHRDL2-204ENST00000525413 STK31Q9BXU1 1019 aa17.74■□□□□ 0.43
CHRDL2-204ENST00000525413 DDX21Q9NR30 783 aaKnown RBP eCLIP17.74■□□□□ 0.43
CHRDL2-204ENST00000525413 TFCP2L1Q9NZI6 479 aa17.74■□□□□ 0.43
CHRDL2-204ENST00000525413 SRCAPQ6ZRS2 3230 aa17.74■□□□□ 0.43
CHRDL2-204ENST00000525413 QSER1Q2KHR3 1735 aa17.74■□□□□ 0.43
CHRDL2-204ENST00000525413 CANXP27824 592 aaKnown RBP17.73■□□□□ 0.43
CHRDL2-204ENST00000525413 NECTIN2Q92692 538 aa17.73■□□□□ 0.43
CHRDL2-204ENST00000525413 ANO8Q9HCE9 1232 aaPredicted RBP17.73■□□□□ 0.43
CHRDL2-204ENST00000525413 UBR3Q6ZT12 1888 aa17.73■□□□□ 0.43
CHRDL2-204ENST00000525413 MYH14Q7Z406 1995 aaKnown RBP17.73■□□□□ 0.43
CHRDL2-204ENST00000525413 HYPKQ9NX55 129 aa17.72■□□□□ 0.43
CHRDL2-204ENST00000525413 CHPF2Q9P2E5 772 aa17.72■□□□□ 0.43
CHRDL2-204ENST00000525413 A0A087WZG4 1122 aa17.71■□□□□ 0.43
CHRDL2-204ENST00000525413 PSDA5PKW4 1024 aaPredicted RBP17.71■□□□□ 0.43
CHRDL2-204ENST00000525413 NBPF26B4DH59 902 aa17.71■□□□□ 0.43
CHRDL2-204ENST00000525413 EIF5P55010 431 aaKnown RBP17.71■□□□□ 0.43
CHRDL2-204ENST00000525413 PDIA6Q15084 440 aa17.71■□□□□ 0.43
CHRDL2-204ENST00000525413 ALDH1L2Q3SY69 923 aa17.71■□□□□ 0.43
CHRDL2-204ENST00000525413 TRAPPC3LQ5T215 181 aa17.71■□□□□ 0.43
CHRDL2-204ENST00000525413 NBPF10Q6P3W6 841 aaKnown RBP17.71■□□□□ 0.43
CHRDL2-204ENST00000525413 NBPF15Q8N660 670 aa17.71■□□□□ 0.43
CHRDL2-204ENST00000525413 COL15A1P39059 1388 aa17.7■□□□□ 0.42
CHRDL2-204ENST00000525413 MYL6BP14649 208 aa17.7■□□□□ 0.42
CHRDL2-204ENST00000525413 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.69■□□□□ 0.42
CHRDL2-204ENST00000525413 R3HDM1Q15032 1099 aaKnown RBP17.69■□□□□ 0.42
CHRDL2-204ENST00000525413 TUBGCP6Q96RT7 1819 aa17.69■□□□□ 0.42
CHRDL2-204ENST00000525413 CACNA1FO60840 1977 aa17.68■□□□□ 0.42
CHRDL2-204ENST00000525413 PHF14O94880 888 aa17.68■□□□□ 0.42
CHRDL2-204ENST00000525413 SLC4A2P04920 1241 aa17.68■□□□□ 0.42
CHRDL2-204ENST00000525413 RFC4P35249 363 aa17.68■□□□□ 0.42
CHRDL2-204ENST00000525413 PIP4K2AP48426 406 aaPredicted RBP17.68■□□□□ 0.42
CHRDL2-204ENST00000525413 ZNF330Q9Y3S2 320 aaPredicted RBP17.68■□□□□ 0.42
CHRDL2-204ENST00000525413 CASZ1Q86V15 1759 aa17.68■□□□□ 0.42
CHRDL2-204ENST00000525413 PNPLA7Q6ZV29 1317 aa17.68■□□□□ 0.42
CHRDL2-204ENST00000525413 PROSER3Q2NL68 480 aa17.67■□□□□ 0.42
CHRDL2-204ENST00000525413 LRP10Q7Z4F1 713 aa17.67■□□□□ 0.42
CHRDL2-204ENST00000525413 ARHGEF1Q92888 912 aaKnown RBP17.67■□□□□ 0.42
CHRDL2-204ENST00000525413 ANXA1P04083 346 aa17.66■□□□□ 0.42
CHRDL2-204ENST00000525413 RARSP54136 660 aaKnown RBP17.66■□□□□ 0.42
CHRDL2-204ENST00000525413 DZIP3Q86Y13 1208 aaKnown RBP17.66■□□□□ 0.42
CHRDL2-204ENST00000525413 C4AP0C0L4 1744 aa17.66■□□□□ 0.42
CHRDL2-204ENST00000525413 LRP5O75197 1615 aa17.65■□□□□ 0.42
CHRDL2-204ENST00000525413 TCERG1O14776 1098 aaKnown RBP17.65■□□□□ 0.42
CHRDL2-204ENST00000525413 RGL2O15211 777 aa17.65■□□□□ 0.42
CHRDL2-204ENST00000525413 ZPR1O75312 459 aa17.65■□□□□ 0.42
CHRDL2-204ENST00000525413 BRPF1P55201 1214 aaPredicted RBP17.65■□□□□ 0.42
CHRDL2-204ENST00000525413 KIF6Q6ZMV9 814 aa17.65■□□□□ 0.42
CHRDL2-204ENST00000525413 COPS6Q7L5N1 327 aa17.65■□□□□ 0.42
CHRDL2-204ENST00000525413 AMIGO3Q86WK7 504 aa17.65■□□□□ 0.42
CHRDL2-204ENST00000525413 COL23A1Q86Y22 540 aaPredicted RBP17.65■□□□□ 0.42
CHRDL2-204ENST00000525413 SLC16A10Q8TF71 515 aa17.65■□□□□ 0.42
CHRDL2-204ENST00000525413 SSH1Q8WYL5 1049 aa17.65■□□□□ 0.42
CHRDL2-204ENST00000525413 SMC4Q9NTJ3 1288 aa17.65■□□□□ 0.42
CHRDL2-204ENST00000525413 NARFQ9UHQ1 456 aa17.65■□□□□ 0.42
CHRDL2-204ENST00000525413 MSH5O43196 834 aa17.64■□□□□ 0.41
CHRDL2-204ENST00000525413 DDX58O95786 925 aaKnown RBP17.64■□□□□ 0.41
CHRDL2-204ENST00000525413 MRPL50Q8N5N7 158 aaKnown RBP17.64■□□□□ 0.41
CHRDL2-204ENST00000525413 XAGE3Q8WTP9 111 aa17.64■□□□□ 0.41
CHRDL2-204ENST00000525413 ARXQ96QS3 562 aa17.64■□□□□ 0.41
CHRDL2-204ENST00000525413 USP42Q9H9J4 1324 aaKnown RBP17.64■□□□□ 0.41
CHRDL2-204ENST00000525413 ERVV-1B6SEH8 477 aa17.63■□□□□ 0.41
CHRDL2-204ENST00000525413 AIMP1Q12904 312 aaKnown RBP17.63■□□□□ 0.41
CHRDL2-204ENST00000525413 PHAXQ9H814 394 aaKnown RBP17.63■□□□□ 0.41
CHRDL2-204ENST00000525413 TBC1D2BQ9UPU7 963 aa17.63■□□□□ 0.41
CHRDL2-204ENST00000525413 MAP3K15Q6ZN16 1313 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms