RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 RFC5P40937 340 aa11.31□□□□□ -0.6
NEDD8-203ENST00000524927 CYP4X1Q8N118 509 aa11.31□□□□□ -0.6
NEDD8-203ENST00000524927 ZNF644Q9H582 1327 aaPredicted RBP11.31□□□□□ -0.6
NEDD8-203ENST00000524927 RPRD2Q5VT52 1461 aaKnown RBP11.31□□□□□ -0.6
NEDD8-203ENST00000524927 ADGRB3O60242 1522 aa11.3□□□□□ -0.6
NEDD8-203ENST00000524927 MTUS2Q5JR59 1369 aa11.3□□□□□ -0.6
NEDD8-203ENST00000524927 MCM6Q14566 821 aa11.3□□□□□ -0.6
NEDD8-203ENST00000524927 COL13A1Q5TAT6 717 aaPredicted RBP11.3□□□□□ -0.6
NEDD8-203ENST00000524927 TNS4Q8IZW8 715 aa11.3□□□□□ -0.6
NEDD8-203ENST00000524927 FAM83GA6ND36 823 aa11.29□□□□□ -0.6
NEDD8-203ENST00000524927 AXIN1O15169 862 aa11.29□□□□□ -0.6
NEDD8-203ENST00000524927 USP46P62068 366 aa11.29□□□□□ -0.6
NEDD8-203ENST00000524927 VPS72Q15906 364 aa11.29□□□□□ -0.6
NEDD8-203ENST00000524927 TUSC1Q2TAM9 212 aa11.29□□□□□ -0.6
NEDD8-203ENST00000524927 HLA-CQ95604 372 aa11.29□□□□□ -0.6
NEDD8-203ENST00000524927 CCDC141Q6ZP82 1450 aa11.29□□□□□ -0.6
NEDD8-203ENST00000524927 CEP152O94986 1710 aa11.29□□□□□ -0.6
NEDD8-203ENST00000524927 ADGRB2O60241 1585 aa11.28□□□□□ -0.6
NEDD8-203ENST00000524927 SMPD1P17405 629 aa11.28□□□□□ -0.6
NEDD8-203ENST00000524927 MSS51Q4VC12 460 aa11.28□□□□□ -0.6
NEDD8-203ENST00000524927 TMEM259Q4ZIN3 620 aa11.28□□□□□ -0.6
NEDD8-203ENST00000524927 EIF2AK4Q9P2K8 1649 aaKnown RBP11.27□□□□□ -0.6
NEDD8-203ENST00000524927 TNS1Q9HBL0 1735 aaKnown RBP11.27□□□□□ -0.61
NEDD8-203ENST00000524927 GJA5P36382 358 aa11.27□□□□□ -0.61
NEDD8-203ENST00000524927 LCE2CQ5TA81 110 aa11.27□□□□□ -0.61
NEDD8-203ENST00000524927 PPP2R2DQ66LE6 453 aa11.27□□□□□ -0.61
NEDD8-203ENST00000524927 CLUAP1Q96AJ1 413 aa11.27□□□□□ -0.61
NEDD8-203ENST00000524927 PCDHB15Q9Y5E8 787 aa11.27□□□□□ -0.61
NEDD8-203ENST00000524927 ZFYVE9O95405 1425 aa11.26□□□□□ -0.61
NEDD8-203ENST00000524927 J3QL48 77 aa11.26□□□□□ -0.61
NEDD8-203ENST00000524927 SMCPP49901 116 aaPredicted RBP11.26□□□□□ -0.61
NEDD8-203ENST00000524927 BANK1Q8NDB2 785 aa11.26□□□□□ -0.61
NEDD8-203ENST00000524927 AMOTL2Q9Y2J4 779 aa11.26□□□□□ -0.61
NEDD8-203ENST00000524927 CASKIN1Q8WXD9 1431 aa11.26□□□□□ -0.61
NEDD8-203ENST00000524927 TRPM2O94759 1503 aa11.25□□□□□ -0.61
NEDD8-203ENST00000524927 EHBP1L1Q8N3D4 1523 aa11.25□□□□□ -0.61
NEDD8-203ENST00000524927 HOXA2O43364 376 aa11.25□□□□□ -0.61
NEDD8-203ENST00000524927 FDX1P10109 184 aa11.25□□□□□ -0.61
NEDD8-203ENST00000524927 QPCTQ16769 361 aa11.25□□□□□ -0.61
NEDD8-203ENST00000524927 ADAMTS13Q76LX8 1427 aa11.25□□□□□ -0.61
NEDD8-203ENST00000524927 TTC24A2A3L6 582 aaPredicted RBP11.24□□□□□ -0.61
NEDD8-203ENST00000524927 SPDYE5A6NIY4 337 aa11.24□□□□□ -0.61
NEDD8-203ENST00000524927 C11orf95C9JLR9 678 aaPredicted RBP11.24□□□□□ -0.61
NEDD8-203ENST00000524927 RAD21O60216 631 aa11.24□□□□□ -0.61
NEDD8-203ENST00000524927 MMP16P51512 607 aa11.24□□□□□ -0.61
NEDD8-203ENST00000524927 ARXQ96QS3 562 aa11.24□□□□□ -0.61
NEDD8-203ENST00000524927 SYT17Q9BSW7 474 aa11.24□□□□□ -0.61
NEDD8-203ENST00000524927 A6NJR5 290 aa11.23□□□□□ -0.61
NEDD8-203ENST00000524927 WNT7AO00755 349 aa11.23□□□□□ -0.61
NEDD8-203ENST00000524927 LILRB3O75022 631 aa11.23□□□□□ -0.61
NEDD8-203ENST00000524927 NFX1Q12986 1120 aaKnown RBP11.23□□□□□ -0.61
NEDD8-203ENST00000524927 TRIM32Q13049 653 aa11.23□□□□□ -0.61
NEDD8-203ENST00000524927 GRIPAP1Q4V328 841 aa11.23□□□□□ -0.61
NEDD8-203ENST00000524927 MRGPRX2Q96LB1 330 aa11.23□□□□□ -0.61
NEDD8-203ENST00000524927 C1orf167Q5SNV9 1468 aa11.23□□□□□ -0.61
NEDD8-203ENST00000524927 NRKQ7Z2Y5 1582 aa11.23□□□□□ -0.61
NEDD8-203ENST00000524927 RREB1Q92766 1687 aa11.23□□□□□ -0.61
NEDD8-203ENST00000524927 ZBTB24O43167 697 aaPredicted RBP11.22□□□□□ -0.61
NEDD8-203ENST00000524927 CABLES1Q8TDN4 633 aa11.22□□□□□ -0.61
NEDD8-203ENST00000524927 SHANK3Q9BYB0 1731 aa11.22□□□□□ -0.61
NEDD8-203ENST00000524927 ZBTB3Q9H5J0 574 aa11.22□□□□□ -0.61
NEDD8-203ENST00000524927 SNRKQ9NRH2 765 aa11.22□□□□□ -0.61
NEDD8-203ENST00000524927 SLC52A1Q9NWF4 448 aa11.22□□□□□ -0.61
NEDD8-203ENST00000524927 NOS1P29475 1434 aa11.21□□□□□ -0.61
NEDD8-203ENST00000524927 ADGRL3Q9HAR2 1447 aa11.21□□□□□ -0.61
NEDD8-203ENST00000524927 RIMS2Q9UQ26 1411 aa11.21□□□□□ -0.61
NEDD8-203ENST00000524927 AP1G2O75843 785 aa11.21□□□□□ -0.61
NEDD8-203ENST00000524927 TSPY4P0CV99 314 aa11.21□□□□□ -0.61
NEDD8-203ENST00000524927 TSPY10P0CW01 314 aa11.21□□□□□ -0.61
NEDD8-203ENST00000524927 SNRPBP14678 240 aaKnown RBP11.21□□□□□ -0.61
NEDD8-203ENST00000524927 GUCA2AQ02747 115 aa11.21□□□□□ -0.61
NEDD8-203ENST00000524927 CTC1Q2NKJ3 1217 aa11.21□□□□□ -0.61
NEDD8-203ENST00000524927 RTL5Q5HYW3 569 aaPredicted RBP11.21□□□□□ -0.61
NEDD8-203ENST00000524927 PRPF38BQ5VTL8 546 aaKnown RBP11.21□□□□□ -0.61
NEDD8-203ENST00000524927 NUP188Q5SRE5 1749 aa11.21□□□□□ -0.62
NEDD8-203ENST00000524927 WFS1O76024 890 aa11.2□□□□□ -0.62
NEDD8-203ENST00000524927 APBA3O96018 575 aa11.2□□□□□ -0.62
NEDD8-203ENST00000524927 SKOR1P84550 965 aa11.2□□□□□ -0.62
NEDD8-203ENST00000524927 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.2□□□□□ -0.62
NEDD8-203ENST00000524927 SNIP1Q8TAD8 396 aaKnown RBP11.2□□□□□ -0.62
NEDD8-203ENST00000524927 FHDC1Q9C0D6 1143 aaPredicted RBP11.2□□□□□ -0.62
NEDD8-203ENST00000524927 CCDC9Q9Y3X0 531 aaKnown RBP11.2□□□□□ -0.62
NEDD8-203ENST00000524927 DLC1Q96QB1 1528 aa11.19□□□□□ -0.62
NEDD8-203ENST00000524927 PTPRUQ92729 1446 aa11.19□□□□□ -0.62
NEDD8-203ENST00000524927 DXOO77932 396 aaKnown RBP11.19□□□□□ -0.62
NEDD8-203ENST00000524927 DNAJC5GQ8N7S2 189 aa11.19□□□□□ -0.62
NEDD8-203ENST00000524927 HPS1Q92902 700 aa11.19□□□□□ -0.62
NEDD8-203ENST00000524927 MYOM1P52179 1685 aa11.18□□□□□ -0.62
NEDD8-203ENST00000524927 TMEM131LA2VDJ0 1609 aa11.18□□□□□ -0.62
NEDD8-203ENST00000524927 APBB1O00213 710 aa11.18□□□□□ -0.62
NEDD8-203ENST00000524927 TRAK2O60296 914 aa11.18□□□□□ -0.62
NEDD8-203ENST00000524927 POM121Q96HA1 1249 aa11.18□□□□□ -0.62
NEDD8-203ENST00000524927 ORAI2Q96SN7 254 aa11.18□□□□□ -0.62
NEDD8-203ENST00000524927 USB1Q9BQ65 265 aaKnown RBP11.18□□□□□ -0.62
NEDD8-203ENST00000524927 ATP13A2Q9NQ11 1180 aa11.18□□□□□ -0.62
NEDD8-203ENST00000524927 PCDHGC3Q9UN70 934 aa11.18□□□□□ -0.62
NEDD8-203ENST00000524927 FYCO1Q9BQS8 1478 aa11.18□□□□□ -0.62
NEDD8-203ENST00000524927 TRIM37O94972 964 aa11.17□□□□□ -0.62
NEDD8-203ENST00000524927 FAM182BQ5T319 152 aa11.17□□□□□ -0.62
NEDD8-203ENST00000524927 SYMPKQ92797 1274 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms