RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 RRP1P56182 461 aaKnown RBP20.27■□□□□ 0.84
TSPAN4-213ENST00000524895 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.27■□□□□ 0.84
TSPAN4-213ENST00000524895 DBF4Q9UBU7 674 aaPredicted RBP20.27■□□□□ 0.84
TSPAN4-213ENST00000524895 CCNL1Q9UK58 526 aaPredicted RBP20.27■□□□□ 0.84
TSPAN4-213ENST00000524895 ERBB4Q15303 1308 aa20.27■□□□□ 0.83
TSPAN4-213ENST00000524895 APBA3O96018 575 aa20.26■□□□□ 0.83
TSPAN4-213ENST00000524895 FRAT1Q92837 279 aaPredicted RBP20.26■□□□□ 0.83
TSPAN4-213ENST00000524895 COL5A3P25940 1745 aaPredicted RBP20.25■□□□□ 0.83
TSPAN4-213ENST00000524895 BRPF1P55201 1214 aaPredicted RBP20.25■□□□□ 0.83
TSPAN4-213ENST00000524895 ITPK1Q13572 414 aa20.25■□□□□ 0.83
TSPAN4-213ENST00000524895 RGPD3A6NKT7 1758 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-213ENST00000524895 RGPD4Q7Z3J3 1758 aa20.24■□□□□ 0.83
TSPAN4-213ENST00000524895 CYP19A1P11511 503 aaPredicted RBP20.24■□□□□ 0.83
TSPAN4-213ENST00000524895 DDX21Q9NR30 783 aaKnown RBP eCLIP20.24■□□□□ 0.83
TSPAN4-213ENST00000524895 MYL6BP14649 208 aa20.23■□□□□ 0.83
TSPAN4-213ENST00000524895 SF3B2Q13435 895 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-213ENST00000524895 HYPKQ9NX55 129 aa20.23■□□□□ 0.83
TSPAN4-213ENST00000524895 NOB1Q9ULX3 412 aaKnown RBP20.23■□□□□ 0.83
TSPAN4-213ENST00000524895 RNF123Q5XPI4 1314 aa20.23■□□□□ 0.83
TSPAN4-213ENST00000524895 PLSCR1O15162 318 aa20.22■□□□□ 0.83
TSPAN4-213ENST00000524895 IPO8O15397 1037 aaKnown RBP20.22■□□□□ 0.83
TSPAN4-213ENST00000524895 PLIN1O60240 522 aa20.22■□□□□ 0.83
TSPAN4-213ENST00000524895 ANXA1P04083 346 aa20.22■□□□□ 0.83
TSPAN4-213ENST00000524895 A1BGP04217 495 aa20.22■□□□□ 0.83
TSPAN4-213ENST00000524895 KCNQ4P56696 695 aa20.22■□□□□ 0.83
TSPAN4-213ENST00000524895 PROSER3Q2NL68 480 aa20.22■□□□□ 0.83
TSPAN4-213ENST00000524895 SLC27A3Q5K4L6 730 aa20.22■□□□□ 0.83
TSPAN4-213ENST00000524895 ZKSCAN2Q63HK3 967 aa20.22■□□□□ 0.83
TSPAN4-213ENST00000524895 CACNA1FO60840 1977 aa20.22■□□□□ 0.83
TSPAN4-213ENST00000524895 PIP4K2AP48426 406 aaPredicted RBP20.21■□□□□ 0.83
TSPAN4-213ENST00000524895 PDIA6Q15084 440 aa20.21■□□□□ 0.83
TSPAN4-213ENST00000524895 LINC00116Q8NCU8 138 aa20.21■□□□□ 0.83
TSPAN4-213ENST00000524895 RREB1Q92766 1687 aa20.21■□□□□ 0.83
TSPAN4-213ENST00000524895 PTPRCP08575 1304 aa20.21■□□□□ 0.83
TSPAN4-213ENST00000524895 NBPF26B4DH59 902 aa20.2■□□□□ 0.82
TSPAN4-213ENST00000524895 CRKLP46109 303 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-213ENST00000524895 FLIIQ13045 1269 aa20.2■□□□□ 0.82
TSPAN4-213ENST00000524895 NBPF14Q5TI25 921 aa20.2■□□□□ 0.82
TSPAN4-213ENST00000524895 NBPF10Q6P3W6 841 aaKnown RBP20.2■□□□□ 0.82
TSPAN4-213ENST00000524895 G2E3Q7L622 706 aa20.2■□□□□ 0.82
TSPAN4-213ENST00000524895 NBPF15Q8N660 670 aa20.2■□□□□ 0.82
TSPAN4-213ENST00000524895 CCDC87Q9NVE4 849 aa20.2■□□□□ 0.82
TSPAN4-213ENST00000524895 TAF1LQ8IZX4 1826 aa20.2■□□□□ 0.82
TSPAN4-213ENST00000524895 TXNRD1Q16881 649 aa20.19■□□□□ 0.82
TSPAN4-213ENST00000524895 PHAXQ9H814 394 aaKnown RBP20.19■□□□□ 0.82
TSPAN4-213ENST00000524895 ZBTB1Q9Y2K1 713 aa20.19■□□□□ 0.82
TSPAN4-213ENST00000524895 CNTNAP4Q9C0A0 1308 aa20.19■□□□□ 0.82
TSPAN4-213ENST00000524895 FKBP5Q13451 457 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-213ENST00000524895 ATF7IPQ6VMQ6 1270 aa20.18■□□□□ 0.82
TSPAN4-213ENST00000524895 ARHGAP45Q92619 1136 aa20.18■□□□□ 0.82
TSPAN4-213ENST00000524895 API5Q9BZZ5 524 aaKnown RBP20.18■□□□□ 0.82
TSPAN4-213ENST00000524895 ZNF330Q9Y3S2 320 aaPredicted RBP20.18■□□□□ 0.82
TSPAN4-213ENST00000524895 C4BP0C0L5 1744 aa20.18■□□□□ 0.82
TSPAN4-213ENST00000524895 NEFLP07196 543 aa20.17■□□□□ 0.82
TSPAN4-213ENST00000524895 HMGB2P26583 209 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-213ENST00000524895 BAG6P46379 1132 aa20.17■□□□□ 0.82
TSPAN4-213ENST00000524895 INTS5Q6P9B9 1019 aaKnown RBP20.17■□□□□ 0.82
TSPAN4-213ENST00000524895 LRRC4BQ9NT99 713 aa20.17■□□□□ 0.82
TSPAN4-213ENST00000524895 MS4A1P11836 297 aa20.16■□□□□ 0.82
TSPAN4-213ENST00000524895 TRIM27P14373 513 aa20.16■□□□□ 0.82
TSPAN4-213ENST00000524895 AIMP1Q12904 312 aaKnown RBP20.16■□□□□ 0.82
TSPAN4-213ENST00000524895 LRP10Q7Z4F1 713 aa20.16■□□□□ 0.82
TSPAN4-213ENST00000524895 NPM2Q86SE8 214 aaKnown RBP20.16■□□□□ 0.82
TSPAN4-213ENST00000524895 FTSJ3Q8IY81 847 aaKnown RBP20.16■□□□□ 0.82
TSPAN4-213ENST00000524895 XAGE3Q8WTP9 111 aa20.16■□□□□ 0.82
TSPAN4-213ENST00000524895 DDX58O95786 925 aaKnown RBP20.15■□□□□ 0.82
TSPAN4-213ENST00000524895 IL6STP40189 918 aaPredicted RBP20.15■□□□□ 0.82
TSPAN4-213ENST00000524895 RC3H1Q5TC82 1133 aaKnown RBP20.15■□□□□ 0.82
TSPAN4-213ENST00000524895 COPS6Q7L5N1 327 aa20.15■□□□□ 0.82
TSPAN4-213ENST00000524895 CCDC125Q86Z20 511 aa20.15■□□□□ 0.82
TSPAN4-213ENST00000524895 EN1Q05925 392 aaPredicted RBP20.14■□□□□ 0.81
TSPAN4-213ENST00000524895 DZIP1LQ8IYY4 767 aaKnown RBP20.14■□□□□ 0.81
TSPAN4-213ENST00000524895 PROM2Q8N271 834 aa20.14■□□□□ 0.81
TSPAN4-213ENST00000524895 CLUAP1Q96AJ1 413 aa20.14■□□□□ 0.81
TSPAN4-213ENST00000524895 AK7Q96M32 723 aa20.14■□□□□ 0.81
TSPAN4-213ENST00000524895 TNNQ9UQP3 1299 aa20.14■□□□□ 0.81
TSPAN4-213ENST00000524895 IRX6P78412 446 aaPredicted RBP20.13■□□□□ 0.81
TSPAN4-213ENST00000524895 PDE3AQ14432 1141 aa20.13■□□□□ 0.81
TSPAN4-213ENST00000524895 MYH14Q7Z406 1995 aaKnown RBP20.13■□□□□ 0.81
TSPAN4-213ENST00000524895 ABCC4O15439 1325 aa20.12■□□□□ 0.81
TSPAN4-213ENST00000524895 GNPATO15228 680 aa20.12■□□□□ 0.81
TSPAN4-213ENST00000524895 C20orf194Q5TEA3 1177 aa20.12■□□□□ 0.81
TSPAN4-213ENST00000524895 KIF6Q6ZMV9 814 aa20.12■□□□□ 0.81
TSPAN4-213ENST00000524895 PANK1Q8TE04 598 aa20.12■□□□□ 0.81
TSPAN4-213ENST00000524895 CAMKK2Q96RR4 588 aa20.12■□□□□ 0.81
TSPAN4-213ENST00000524895 PXDNLA1KZ92 1463 aa20.11■□□□□ 0.81
TSPAN4-213ENST00000524895 ADCY9O60503 1353 aa20.11■□□□□ 0.81
TSPAN4-213ENST00000524895 COL15A1P39059 1388 aa20.11■□□□□ 0.81
TSPAN4-213ENST00000524895 EIF5P55010 431 aaKnown RBP20.11■□□□□ 0.81
TSPAN4-213ENST00000524895 EZH2Q15910 746 aaKnown RBP20.11■□□□□ 0.81
TSPAN4-213ENST00000524895 ARXQ96QS3 562 aa20.11■□□□□ 0.81
TSPAN4-213ENST00000524895 PI4KAP2A4QPH2 592 aa20.1■□□□□ 0.81
TSPAN4-213ENST00000524895 F6X3S4 739 aa20.1■□□□□ 0.81
TSPAN4-213ENST00000524895 KSR2Q6VAB6 950 aa20.1■□□□□ 0.81
TSPAN4-213ENST00000524895 TTLL7Q6ZT98 887 aa20.1■□□□□ 0.81
TSPAN4-213ENST00000524895 RIC3Q7Z5B4 369 aa20.1■□□□□ 0.81
TSPAN4-213ENST00000524895 DEFB132Q7Z7B7 95 aa20.1■□□□□ 0.81
TSPAN4-213ENST00000524895 PI4KAP1Q8N8J0 262 aa20.1■□□□□ 0.81
TSPAN4-213ENST00000524895 RTCBQ9Y3I0 505 aaKnown RBP20.1■□□□□ 0.81
TSPAN4-213ENST00000524895 ARFGEF2Q9Y6D5 1785 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms