RNA–Protein interactions for RNA: ENST00000524257.5

PTK2-256, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 430 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-256	ENST00000524257	USP42	Q9H9J4	1324 aa	Known RBP	14.09	□□□□□ -0.15
PTK2-256	ENST00000524257	COL15A1	P39059	1388 aa		14.09	□□□□□ -0.15
PTK2-256	ENST00000524257	WDR43	Q15061	677 aa	Known RBP eCLIP	14.08	□□□□□ -0.16
PTK2-256	ENST00000524257	ZPR1	O75312	459 aa		14.07	□□□□□ -0.16
PTK2-256	ENST00000524257	CANX	P27824	592 aa	Known RBP	14.07	□□□□□ -0.16
PTK2-256	ENST00000524257	TAF7	Q15545	349 aa	Predicted RBP	14.07	□□□□□ -0.16
PTK2-256	ENST00000524257	GPR162	Q16538	588 aa		14.07	□□□□□ -0.16
PTK2-256	ENST00000524257	PELP1	Q8IZL8	1130 aa	Known RBP	14.07	□□□□□ -0.16
PTK2-256	ENST00000524257	FKBP8	Q14318	412 aa		14.06	□□□□□ -0.16
PTK2-256	ENST00000524257	PARP3	Q9Y6F1	533 aa		14.06	□□□□□ -0.16
PTK2-256	ENST00000524257	KDM3B	Q7LBC6	1761 aa		14.06	□□□□□ -0.16
PTK2-256	ENST00000524257	RIPK4	P57078	832 aa		14.05	□□□□□ -0.16
PTK2-256	ENST00000524257	USPL1	Q5W0Q7	1092 aa		14.05	□□□□□ -0.16
PTK2-256	ENST00000524257	CCDC146	Q8IYE0	955 aa		14.05	□□□□□ -0.16
PTK2-256	ENST00000524257	THUMPD2	Q9BTF0	503 aa	Known RBP	14.05	□□□□□ -0.16
PTK2-256	ENST00000524257	MIS18A	Q9NYP9	233 aa		14.05	□□□□□ -0.16
PTK2-256	ENST00000524257	KIF13B	Q9NQT8	1826 aa		14.05	□□□□□ -0.16
PTK2-256	ENST00000524257	CHD4	Q14839	1912 aa		14.05	□□□□□ -0.16
PTK2-256	ENST00000524257	PRAMEF22	A3QJZ6	481 aa		14.04	□□□□□ -0.16
PTK2-256	ENST00000524257	A1BG	P04217	495 aa		14.04	□□□□□ -0.16
PTK2-256	ENST00000524257	SNRPA1	P09661	255 aa	Known RBP	14.04	□□□□□ -0.16
PTK2-256	ENST00000524257	YY1	P25490	414 aa		14.04	□□□□□ -0.16
PTK2-256	ENST00000524257	TMPO	P42166	694 aa	Known RBP	14.04	□□□□□ -0.16
PTK2-256	ENST00000524257	EIF5	P55010	431 aa	Known RBP	14.04	□□□□□ -0.16
PTK2-256	ENST00000524257	PNISR	Q8TF01	805 aa	Known RBP	14.04	□□□□□ -0.16
PTK2-256	ENST00000524257	NARF	Q9UHQ1	456 aa		14.04	□□□□□ -0.16
PTK2-256	ENST00000524257	USP16	Q9Y5T5	823 aa		14.04	□□□□□ -0.16
PTK2-256	ENST00000524257		A0A087WZG4	1122 aa		14.03	□□□□□ -0.16
PTK2-256	ENST00000524257	RUNDC1	Q96C34	613 aa		14.03	□□□□□ -0.16
PTK2-256	ENST00000524257	ADAMTS8	Q9UP79	889 aa		14.03	□□□□□ -0.16
PTK2-256	ENST00000524257	ZNF330	Q9Y3S2	320 aa	Predicted RBP	14.03	□□□□□ -0.16
PTK2-256	ENST00000524257	LAMB4	A4D0S4	1761 aa		14.02	□□□□□ -0.16
PTK2-256	ENST00000524257	N4BP2	Q86UW6	1770 aa	Predicted RBP	14.02	□□□□□ -0.16
PTK2-256	ENST00000524257	C10orf71	Q711Q0	1435 aa		14.02	□□□□□ -0.16
PTK2-256	ENST00000524257	IL6ST	P40189	918 aa	Predicted RBP	14.02	□□□□□ -0.17
PTK2-256	ENST00000524257	DDR1	Q08345	913 aa		14.02	□□□□□ -0.17
PTK2-256	ENST00000524257	LMOD3	Q0VAK6	560 aa		14.02	□□□□□ -0.17
PTK2-256	ENST00000524257	NEUROD2	Q15784	382 aa		14.02	□□□□□ -0.17
PTK2-256	ENST00000524257	RRP7A	Q9Y3A4	280 aa	Known RBP	14.02	□□□□□ -0.17
PTK2-256	ENST00000524257	KIAA1551	Q9HCM1	1747 aa		14.01	□□□□□ -0.17
PTK2-256	ENST00000524257	SCN7A	Q01118	1682 aa		14.01	□□□□□ -0.17
PTK2-256	ENST00000524257	UTRN	P46939	3433 aa		14.01	□□□□□ -0.17
PTK2-256	ENST00000524257	YBX3	P16989	372 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
PTK2-256	ENST00000524257	TM4SF1	P30408	202 aa		14.01	□□□□□ -0.17
PTK2-256	ENST00000524257	PIP4K2A	P48426	406 aa	Predicted RBP	14.01	□□□□□ -0.17
PTK2-256	ENST00000524257	NPM2	Q86SE8	214 aa	Known RBP	14.01	□□□□□ -0.17
PTK2-256	ENST00000524257	BCL2L12	Q9HB09	334 aa		14.01	□□□□□ -0.17
PTK2-256	ENST00000524257	PXDNL	A1KZ92	1463 aa		14	□□□□□ -0.17
PTK2-256	ENST00000524257	AFDN	P55196	1824 aa	Known RBP	14	□□□□□ -0.17
PTK2-256	ENST00000524257	POLRMT	O00411	1230 aa	Known RBP	14	□□□□□ -0.17
PTK2-256	ENST00000524257	WWC3	Q9ULE0	1092 aa		14	□□□□□ -0.17
PTK2-256	ENST00000524257	TBC1D2B	Q9UPU7	963 aa		14	□□□□□ -0.17
PTK2-256	ENST00000524257	BCOR	Q6W2J9	1755 aa		13.99	□□□□□ -0.17
PTK2-256	ENST00000524257	GRIN3B	O60391	1043 aa		13.99	□□□□□ -0.17
PTK2-256	ENST00000524257	EIF4A1	P60842	406 aa	Known RBP	13.99	□□□□□ -0.17
PTK2-256	ENST00000524257	TGFB2	P61812	414 aa		13.99	□□□□□ -0.17
PTK2-256	ENST00000524257	NFIX	Q14938	502 aa		13.99	□□□□□ -0.17
PTK2-256	ENST00000524257	TSPYL4	Q9UJ04	414 aa		13.99	□□□□□ -0.17
PTK2-256	ENST00000524257		A0A0G2JLW4	131 aa		13.98	□□□□□ -0.17
PTK2-256	ENST00000524257	NRXN2	Q9P2S2	1712 aa		13.98	□□□□□ -0.17
PTK2-256	ENST00000524257	GOLGB1	Q14789	3259 aa	Known RBP	13.98	□□□□□ -0.17
PTK2-256	ENST00000524257	NBPF26	B4DH59	902 aa		13.97	□□□□□ -0.17
PTK2-256	ENST00000524257	ANP32C	O43423	234 aa		13.97	□□□□□ -0.17
PTK2-256	ENST00000524257	GIGYF1	O75420	1035 aa	Predicted RBP	13.97	□□□□□ -0.17
PTK2-256	ENST00000524257	CCDC184	Q52MB2	194 aa		13.97	□□□□□ -0.17
PTK2-256	ENST00000524257	NBPF10	Q6P3W6	841 aa	Known RBP	13.97	□□□□□ -0.17
PTK2-256	ENST00000524257	BICDL1	Q6ZP65	573 aa		13.97	□□□□□ -0.17
PTK2-256	ENST00000524257	DZIP3	Q86Y13	1208 aa	Known RBP	13.97	□□□□□ -0.17
PTK2-256	ENST00000524257	NBPF15	Q8N660	670 aa		13.97	□□□□□ -0.17
PTK2-256	ENST00000524257	TRIM35	Q9UPQ4	493 aa		13.97	□□□□□ -0.17
PTK2-256	ENST00000524257	BRCA1	P38398	1863 aa	Known RBP	13.96	□□□□□ -0.17
PTK2-256	ENST00000524257	CAMTA2	O94983	1202 aa		13.96	□□□□□ -0.17
PTK2-256	ENST00000524257	SERPINB2	P05120	415 aa		13.96	□□□□□ -0.17
PTK2-256	ENST00000524257	DPEP1	P16444	411 aa		13.96	□□□□□ -0.17
PTK2-256	ENST00000524257	TBC1D9B	Q66K14	1250 aa		13.96	□□□□□ -0.17
PTK2-256	ENST00000524257	BABAM1	Q9NWV8	329 aa		13.96	□□□□□ -0.17
PTK2-256	ENST00000524257	APAF1	O14727	1248 aa		13.94	□□□□□ -0.18
PTK2-256	ENST00000524257	BCS1L	Q9Y276	419 aa		13.94	□□□□□ -0.18
PTK2-256	ENST00000524257	LAS1L	Q9Y4W2	734 aa	Known RBP	13.94	□□□□□ -0.18
PTK2-256	ENST00000524257	KCNA3	P22001	575 aa		13.93	□□□□□ -0.18
PTK2-256	ENST00000524257	NGEF	Q8N5V2	710 aa		13.93	□□□□□ -0.18
PTK2-256	ENST00000524257	CARMIL3	Q8ND23	1372 aa		13.93	□□□□□ -0.18
PTK2-256	ENST00000524257	CHL1	O00533	1208 aa		13.92	□□□□□ -0.18
PTK2-256	ENST00000524257	CHRNA5	P30532	468 aa		13.92	□□□□□ -0.18
PTK2-256	ENST00000524257	CLEC4G	Q6UXB4	293 aa		13.92	□□□□□ -0.18
PTK2-256	ENST00000524257	SETDB2	Q96T68	719 aa		13.92	□□□□□ -0.18
PTK2-256	ENST00000524257	MRS2	Q9HD23	443 aa		13.92	□□□□□ -0.18
PTK2-256	ENST00000524257	PIM2	Q9P1W9	311 aa		13.92	□□□□□ -0.18
PTK2-256	ENST00000524257	ZNF652	Q9Y2D9	606 aa		13.92	□□□□□ -0.18
PTK2-256	ENST00000524257	ARFGEF1	Q9Y6D6	1849 aa		13.92	□□□□□ -0.18
PTK2-256	ENST00000524257	ANKRD31	Q8N7Z5	1873 aa		13.91	□□□□□ -0.18
PTK2-256	ENST00000524257	MYL6B	P14649	208 aa		13.91	□□□□□ -0.18
PTK2-256	ENST00000524257	EIF2S2	P20042	333 aa	Known RBP	13.91	□□□□□ -0.18
PTK2-256	ENST00000524257	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.91	□□□□□ -0.18
PTK2-256	ENST00000524257	DLEC1	Q9Y238	1755 aa		13.91	□□□□□ -0.18
PTK2-256	ENST00000524257	ERBB4	Q15303	1308 aa		13.9	□□□□□ -0.18
PTK2-256	ENST00000524257	NUP98	P52948	1817 aa		13.9	□□□□□ -0.18
PTK2-256	ENST00000524257	PRR5L	Q6MZQ0	368 aa		13.9	□□□□□ -0.18
PTK2-256	ENST00000524257	RGL2	O15211	777 aa		13.89	□□□□□ -0.19
PTK2-256	ENST00000524257	NPHP1	O15259	732 aa		13.89	□□□□□ -0.19

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