RNA–Protein interactions for RNA: ENST00000524226.5

PCM1-222, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best) BASIC

Gene PCM1, Length 5,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-222ENST00000524226 VPS53Q5VIR6 699 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.11□□□□□ -1.91
PCM1-222ENST00000524226 ZNF710Q8N1W2 664 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 ORAI2Q96SN7 254 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 BABAM1Q9NWV8 329 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 BECN2A8MW95 431 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 RAD21O60216 631 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 VAMP4O75379 141 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 GCP02774 474 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 EIF2S2P20042 333 aaKnown RBP3.11□□□□□ -1.91
PCM1-222ENST00000524226 NF2P35240 595 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 AKAP4Q5JQC9 854 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 ANKRD45Q5TZF3 282 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 BACH2Q9BYV9 841 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 DCCP43146 1447 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 MARCH6O60337 910 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 CABP4P57796 275 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 RUFY1Q96T51 708 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 C1orf167Q5SNV9 1468 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 IGHDP01880 384 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 BRPF1P55201 1214 aaPredicted RBP3.11□□□□□ -1.91
PCM1-222ENST00000524226 ZC3H6P61129 1189 aaKnown RBP3.11□□□□□ -1.91
PCM1-222ENST00000524226 HDAC1Q13547 482 aaPredicted RBP3.11□□□□□ -1.91
PCM1-222ENST00000524226 C8orf58Q8NAV2 365 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 NECTIN2Q92692 538 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 MIS18AQ9NYP9 233 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 PARP3Q9Y6F1 533 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 SSH2Q76I76 1423 aa3.11□□□□□ -1.91
PCM1-222ENST00000524226 SETD1BQ9UPS6 1966 aaKnown RBP3.11□□□□□ -1.91
PCM1-222ENST00000524226 CCDC66A2RUB6 948 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 DDX58O95786 925 aaKnown RBP3.1□□□□□ -1.91
PCM1-222ENST00000524226 ZNF853P0CG23 659 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 RLBP1P12271 317 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 AKAP17AQ02040 695 aaKnown RBP3.1□□□□□ -1.91
PCM1-222ENST00000524226 CCDC173Q0VFZ6 552 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 NEXNQ0ZGT2 675 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 ZRSR2Q15696 482 aaKnown RBP3.1□□□□□ -1.91
PCM1-222ENST00000524226 HSP90B2PQ58FF3 399 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 HDGFL1Q5TGJ6 251 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 ZNF652Q9Y2D9 606 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 PEAK1Q9H792 1746 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 RGPD8O14715 1765 aaPredicted RBP3.1□□□□□ -1.91
PCM1-222ENST00000524226 SPDYE4A6NLX3 237 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 GNAI3P08754 354 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 RBM5P52756 815 aaKnown RBP eCLIP3.1□□□□□ -1.91
PCM1-222ENST00000524226 ZNF771Q7L3S4 317 aaPredicted RBP3.1□□□□□ -1.91
PCM1-222ENST00000524226 C1orf115Q9H7X2 142 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 TNS3Q68CZ2 1445 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 CHL1O00533 1208 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 CCP110O43303 1012 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 ST5P78524 1137 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 SYNE3Q6ZMZ3 975 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 TSPYL6Q8N831 410 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 CAGE1Q8TC20 777 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 TMOD2Q9NZR1 351 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 TRPC5Q9UL62 973 aaPredicted RBP3.1□□□□□ -1.91
PCM1-222ENST00000524226 TNNQ9UQP3 1299 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 GNAI2P04899 355 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 RUFY2Q8WXA3 655 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 DIAPH3Q9NSV4 1193 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 TAOK2Q9UL54 1235 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 NCAPD2Q15021 1401 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 APBB1O00213 710 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 APBA3O96018 575 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 MFAP1P55081 439 aaKnown RBP3.1□□□□□ -1.91
PCM1-222ENST00000524226 WWC2Q6AWC2 1192 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 QTRT2Q9H974 415 aaKnown RBP3.1□□□□□ -1.91
PCM1-222ENST00000524226 TFCP2L1Q9NZI6 479 aa3.1□□□□□ -1.91
PCM1-222ENST00000524226 ABCC4O15439 1325 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 A0A087WZG4 1122 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 H3BQV1 296 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 UBTFL1P0CB47 393 aaPredicted RBP3.09□□□□□ -1.91
PCM1-222ENST00000524226 IFFO2Q5TF58 517 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 CHD1LQ86WJ1 897 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 RPAP2Q8IXW5 612 aaPredicted RBP3.09□□□□□ -1.91
PCM1-222ENST00000524226 TMEM87AQ8NBN3 555 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 LTN1O94822 1766 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 TRIM29Q14134 588 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 ARHGEF6Q15052 776 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 NBPF6Q5VWK0 638 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 MPRIPQ6WCQ1 1025 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 FAM184AQ8NB25 1140 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 NBPF4Q96M43 638 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 KDRP35968 1356 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 RNMTO43148 476 aaKnown RBP3.09□□□□□ -1.91
PCM1-222ENST00000524226 RFC4P35249 363 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 ARHGEF25Q86VW2 580 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 IFNL2Q8IZJ0 200 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 TXLNBQ8N3L3 684 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 ZNF622Q969S3 477 aaKnown RBP eCLIP3.09□□□□□ -1.917e-8■■□□□ 13
PCM1-222ENST00000524226 LNPKQ9C0E8 428 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 ZBTB40Q9NUA8 1239 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 BIN2Q9UBW5 565 aaPredicted RBP3.09□□□□□ -1.91
PCM1-222ENST00000524226 PCDHB15Q9Y5E8 787 aa3.09□□□□□ -1.91
PCM1-222ENST00000524226 USP54Q70EL1 1684 aa3.09□□□□□ -1.92
PCM1-222ENST00000524226 REC8O95072 547 aa3.09□□□□□ -1.92
PCM1-222ENST00000524226 FLIIQ13045 1269 aa3.09□□□□□ -1.92
PCM1-222ENST00000524226 RPGRQ92834 1020 aaKnown RBP3.09□□□□□ -1.92
PCM1-222ENST00000524226 SRCIN1Q9C0H9 1055 aa3.09□□□□□ -1.92
PCM1-222ENST00000524226 TMOD3Q9NYL9 352 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms