RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 ADRA2BP18089 450 aa21.77■■□□□ 1.08
CSGALNACT1-216ENST00000524213 FMNL2Q96PY5 1086 aa21.77■■□□□ 1.08
CSGALNACT1-216ENST00000524213 KCNQ3O43525 872 aa21.76■■□□□ 1.07
CSGALNACT1-216ENST00000524213 CCDC87Q9NVE4 849 aa21.76■■□□□ 1.07
CSGALNACT1-216ENST00000524213 HEG1Q9ULI3 1381 aa21.75■■□□□ 1.07
CSGALNACT1-216ENST00000524213 TEX13AQ9BXU3 409 aaPredicted RBP21.75■■□□□ 1.07
CSGALNACT1-216ENST00000524213 KDM3BQ7LBC6 1761 aa21.74■■□□□ 1.07
CSGALNACT1-216ENST00000524213 RFC4P35249 363 aa21.74■■□□□ 1.07
CSGALNACT1-216ENST00000524213 FAM9BQ8IZU0 186 aa21.74■■□□□ 1.07
CSGALNACT1-216ENST00000524213 THUMPD2Q9BTF0 503 aaKnown RBP21.74■■□□□ 1.07
CSGALNACT1-216ENST00000524213 BABAM1Q9NWV8 329 aa21.74■■□□□ 1.07
CSGALNACT1-216ENST00000524213 TRIM35Q9UPQ4 493 aa21.73■■□□□ 1.07
CSGALNACT1-216ENST00000524213 NCBP3Q53F19 620 aaKnown RBP21.72■■□□□ 1.07
CSGALNACT1-216ENST00000524213 NLGN2Q8NFZ4 835 aa21.72■■□□□ 1.07
CSGALNACT1-216ENST00000524213 ZBTB1Q9Y2K1 713 aa21.72■■□□□ 1.07
CSGALNACT1-216ENST00000524213 SOS1Q07889 1333 aaPredicted RBP21.72■■□□□ 1.07
CSGALNACT1-216ENST00000524213 GYS1P13807 737 aa21.71■■□□□ 1.07
CSGALNACT1-216ENST00000524213 CALD1Q05682 793 aaKnown RBP21.71■■□□□ 1.07
CSGALNACT1-216ENST00000524213 SRP68Q9UHB9 627 aaKnown RBP21.71■■□□□ 1.07
CSGALNACT1-216ENST00000524213 DCAF8L1A6NGE4 600 aa21.7■■□□□ 1.06
CSGALNACT1-216ENST00000524213 STARD3NLO95772 234 aa21.7■■□□□ 1.06
CSGALNACT1-216ENST00000524213 MMP10P09238 476 aa21.69■■□□□ 1.06
CSGALNACT1-216ENST00000524213 NLGN1Q8N2Q7 840 aa21.69■■□□□ 1.06
CSGALNACT1-216ENST00000524213 TSPYL4Q9UJ04 414 aa21.69■■□□□ 1.06
CSGALNACT1-216ENST00000524213 USP42Q9H9J4 1324 aaKnown RBP21.69■■□□□ 1.06
CSGALNACT1-216ENST00000524213 KIF13BQ9NQT8 1826 aa21.69■■□□□ 1.06
CSGALNACT1-216ENST00000524213 SNRPA1P09661 255 aaKnown RBP21.68■■□□□ 1.06
CSGALNACT1-216ENST00000524213 CANXP27824 592 aaKnown RBP21.68■■□□□ 1.06
CSGALNACT1-216ENST00000524213 CCDC27Q2M243 656 aa21.68■■□□□ 1.06
CSGALNACT1-216ENST00000524213 MIS18AQ9NYP9 233 aa21.68■■□□□ 1.06
CSGALNACT1-216ENST00000524213 COL15A1P39059 1388 aa21.68■■□□□ 1.06
CSGALNACT1-216ENST00000524213 LAMB4A4D0S4 1761 aa21.68■■□□□ 1.06
CSGALNACT1-216ENST00000524213 NGEFQ8N5V2 710 aa21.67■■□□□ 1.06
CSGALNACT1-216ENST00000524213 PRAMEF22A3QJZ6 481 aa21.66■■□□□ 1.06
CSGALNACT1-216ENST00000524213 CD2APQ9Y5K6 639 aa21.66■■□□□ 1.06
CSGALNACT1-216ENST00000524213 EIF4A1P60842 406 aaKnown RBP21.65■■□□□ 1.06
CSGALNACT1-216ENST00000524213 FKBP8Q14318 412 aa21.65■■□□□ 1.06
CSGALNACT1-216ENST00000524213 KIAA1551Q9HCM1 1747 aa21.65■■□□□ 1.06
CSGALNACT1-216ENST00000524213 SCN7AQ01118 1682 aa21.64■■□□□ 1.05
CSGALNACT1-216ENST00000524213 CHL1O00533 1208 aa21.64■■□□□ 1.05
CSGALNACT1-216ENST00000524213 A1BGP04217 495 aa21.64■■□□□ 1.05
CSGALNACT1-216ENST00000524213 USPL1Q5W0Q7 1092 aa21.64■■□□□ 1.05
CSGALNACT1-216ENST00000524213 CFAP44Q96MT7 982 aa21.64■■□□□ 1.05
CSGALNACT1-216ENST00000524213 LAS1LQ9Y4W2 734 aaKnown RBP21.64■■□□□ 1.05
CSGALNACT1-216ENST00000524213 USP16Q9Y5T5 823 aa21.64■■□□□ 1.05
CSGALNACT1-216ENST00000524213 CHD4Q14839 1912 aa21.64■■□□□ 1.05
CSGALNACT1-216ENST00000524213 N4BP2Q86UW6 1770 aaPredicted RBP21.64■■□□□ 1.05
CSGALNACT1-216ENST00000524213 ZPR1O75312 459 aa21.63■■□□□ 1.05
CSGALNACT1-216ENST00000524213 EIF5P55010 431 aaKnown RBP21.63■■□□□ 1.05
CSGALNACT1-216ENST00000524213 GNAI1P63096 354 aa21.63■■□□□ 1.05
CSGALNACT1-216ENST00000524213 MIER1Q8N108 512 aa21.63■■□□□ 1.05
CSGALNACT1-216ENST00000524213 NARFQ9UHQ1 456 aa21.63■■□□□ 1.05
CSGALNACT1-216ENST00000524213 AFDNP55196 1824 aaKnown RBP21.63■■□□□ 1.05
CSGALNACT1-216ENST00000524213 IFT57Q9NWB7 429 aa21.62■■□□□ 1.05
CSGALNACT1-216ENST00000524213 BCORQ6W2J9 1755 aa21.61■■□□□ 1.05
CSGALNACT1-216ENST00000524213 GPR162Q16538 588 aa21.61■■□□□ 1.05
CSGALNACT1-216ENST00000524213 WWC1Q8IX03 1113 aa21.61■■□□□ 1.05
CSGALNACT1-216ENST00000524213 PELP1Q8IZL8 1130 aaKnown RBP21.61■■□□□ 1.05
CSGALNACT1-216ENST00000524213 ZNF330Q9Y3S2 320 aaPredicted RBP21.61■■□□□ 1.05
CSGALNACT1-216ENST00000524213 PARP3Q9Y6F1 533 aa21.61■■□□□ 1.05
CSGALNACT1-216ENST00000524213 GOLGB1Q14789 3259 aaKnown RBP21.61■■□□□ 1.05
CSGALNACT1-216ENST00000524213 GIGYF1O75420 1035 aaPredicted RBP21.6■■□□□ 1.05
CSGALNACT1-216ENST00000524213 IL6STP40189 918 aaPredicted RBP21.6■■□□□ 1.05
CSGALNACT1-216ENST00000524213 PIP4K2AP48426 406 aaPredicted RBP21.6■■□□□ 1.05
CSGALNACT1-216ENST00000524213 DDR1Q08345 913 aa21.6■■□□□ 1.05
CSGALNACT1-216ENST00000524213 NPM2Q86SE8 214 aaKnown RBP21.6■■□□□ 1.05
CSGALNACT1-216ENST00000524213 BCL2L12Q9HB09 334 aa21.6■■□□□ 1.05
CSGALNACT1-216ENST00000524213 C10orf71Q711Q0 1435 aa21.6■■□□□ 1.05
CSGALNACT1-216ENST00000524213 UTRNP46939 3433 aa21.6■■□□□ 1.05
CSGALNACT1-216ENST00000524213 ZNF853P0CG23 659 aa21.59■■□□□ 1.05
CSGALNACT1-216ENST00000524213 IL16Q14005 1332 aa21.58■■□□□ 1.05
CSGALNACT1-216ENST00000524213 NRXN2Q9P2S2 1712 aa21.58■■□□□ 1.05
CSGALNACT1-216ENST00000524213 A0A087WZG4 1122 aa21.58■■□□□ 1.05
CSGALNACT1-216ENST00000524213 TM4SF1P30408 202 aa21.58■■□□□ 1.05
CSGALNACT1-216ENST00000524213 WDR63Q8IWG1 891 aa21.57■■□□□ 1.04
CSGALNACT1-216ENST00000524213 TBC1D2BQ9UPU7 963 aa21.57■■□□□ 1.04
CSGALNACT1-216ENST00000524213 BRCA1P38398 1863 aaKnown RBP21.56■■□□□ 1.04
CSGALNACT1-216ENST00000524213 POLRMTO00411 1230 aaKnown RBP21.56■■□□□ 1.04
CSGALNACT1-216ENST00000524213 YBX3P16989 372 aaKnown RBP eCLIP21.56■■□□□ 1.04
CSGALNACT1-216ENST00000524213 MBIPQ9NS73 344 aa21.56■■□□□ 1.04
CSGALNACT1-216ENST00000524213 SALL2Q9Y467 1007 aaPredicted RBP21.56■■□□□ 1.04
CSGALNACT1-216ENST00000524213 PXDNLA1KZ92 1463 aa21.56■■□□□ 1.04
CSGALNACT1-216ENST00000524213 NBPF26B4DH59 902 aa21.55■■□□□ 1.04
CSGALNACT1-216ENST00000524213 HOXB7P09629 217 aa21.55■■□□□ 1.04
CSGALNACT1-216ENST00000524213 NFIXQ14938 502 aa21.55■■□□□ 1.04
CSGALNACT1-216ENST00000524213 NBPF10Q6P3W6 841 aaKnown RBP21.55■■□□□ 1.04
CSGALNACT1-216ENST00000524213 NBPF15Q8N660 670 aa21.55■■□□□ 1.04
CSGALNACT1-216ENST00000524213 ERBB4Q15303 1308 aa21.55■■□□□ 1.04
CSGALNACT1-216ENST00000524213 SENP3-EIF4A1A0A087X0R7 540 aa21.54■■□□□ 1.04
CSGALNACT1-216ENST00000524213 YY1P25490 414 aa21.54■■□□□ 1.04
CSGALNACT1-216ENST00000524213 WWC3Q9ULE0 1092 aa21.54■■□□□ 1.04
CSGALNACT1-216ENST00000524213 CAMTA2O94983 1202 aa21.52■■□□□ 1.04
CSGALNACT1-216ENST00000524213 DZIP3Q86Y13 1208 aaKnown RBP21.52■■□□□ 1.04
CSGALNACT1-216ENST00000524213 TGFB2P61812 414 aa21.51■■□□□ 1.03
CSGALNACT1-216ENST00000524213 TBC1D9BQ66K14 1250 aa21.51■■□□□ 1.03
CSGALNACT1-216ENST00000524213 BICDL1Q6ZP65 573 aa21.51■■□□□ 1.03
CSGALNACT1-216ENST00000524213 CHMP4AQ9BY43 222 aa21.51■■□□□ 1.03
CSGALNACT1-216ENST00000524213 A0A0G2JLW4 131 aa21.5■■□□□ 1.03
CSGALNACT1-216ENST00000524213 EIF2S2P20042 333 aaKnown RBP21.5■■□□□ 1.03
CSGALNACT1-216ENST00000524213 ANKRD31Q8N7Z5 1873 aa21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms