RNA–Protein interactions for RNA: ENST00000523765.1

LAMA4-220, Transcript of laminin subunit alpha 4, humanhuman

TSL 5

Gene LAMA4, Length 1,054 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-220ENST00000523765 PHKG2P15735 406 aa13.64□□□□□ -0.23
LAMA4-220ENST00000523765 MKRN1Q9UHC7 482 aaKnown RBP13.64□□□□□ -0.23
LAMA4-220ENST00000523765 TNRC18O15417 2968 aaPredicted RBP13.63□□□□□ -0.23
LAMA4-220ENST00000523765 RPS6KA4O75676 772 aa13.63□□□□□ -0.23
LAMA4-220ENST00000523765 RFC4P35249 363 aa13.63□□□□□ -0.23
LAMA4-220ENST00000523765 PUS7Q96PZ0 661 aaKnown RBP13.63□□□□□ -0.23
LAMA4-220ENST00000523765 GLTPD2A6NH11 291 aa13.62□□□□□ -0.23
LAMA4-220ENST00000523765 POTEIP0CG38 1075 aa13.62□□□□□ -0.23
LAMA4-220ENST00000523765 POTEJP0CG39 1038 aa13.62□□□□□ -0.23
LAMA4-220ENST00000523765 VEGFAP15692 232 aaPredicted RBP13.62□□□□□ -0.23
LAMA4-220ENST00000523765 RC3H1Q5TC82 1133 aaKnown RBP13.62□□□□□ -0.23
LAMA4-220ENST00000523765 SPG7Q9UQ90 795 aa13.62□□□□□ -0.23
LAMA4-220ENST00000523765 CNTNAP4Q9C0A0 1308 aa13.62□□□□□ -0.23
LAMA4-220ENST00000523765 EYA1Q99502 592 aa13.61□□□□□ -0.23
LAMA4-220ENST00000523765 TONSLQ96HA7 1378 aa13.6□□□□□ -0.23
LAMA4-220ENST00000523765 VIRMAQ69YN4 1812 aaKnown RBP13.6□□□□□ -0.23
LAMA4-220ENST00000523765 POLRMTO00411 1230 aaKnown RBP13.6□□□□□ -0.23
LAMA4-220ENST00000523765 FAM161AQ3B820 660 aa13.6□□□□□ -0.23
LAMA4-220ENST00000523765 PIP4P2Q8N4L2 257 aa13.6□□□□□ -0.23
LAMA4-220ENST00000523765 NRXN2Q9P2S2 1712 aa13.6□□□□□ -0.23
LAMA4-220ENST00000523765 ST20-MTHFSA0A0A6YYL1 179 aa13.59□□□□□ -0.23
LAMA4-220ENST00000523765 NFKBIEO00221 500 aa13.59□□□□□ -0.23
LAMA4-220ENST00000523765 IFNL2Q8IZJ0 200 aa13.59□□□□□ -0.23
LAMA4-220ENST00000523765 USP42Q9H9J4 1324 aaKnown RBP13.59□□□□□ -0.23
LAMA4-220ENST00000523765 KIF24Q5T7B8 1368 aa13.58□□□□□ -0.23
LAMA4-220ENST00000523765 LMNB1P20700 586 aa13.58□□□□□ -0.24
LAMA4-220ENST00000523765 TM4SF1P30408 202 aa13.58□□□□□ -0.24
LAMA4-220ENST00000523765 CRKLP46109 303 aaKnown RBP13.58□□□□□ -0.24
LAMA4-220ENST00000523765 DICER1Q9UPY3 1922 aaKnown RBP13.58□□□□□ -0.24
LAMA4-220ENST00000523765 PPM1GO15355 546 aaPredicted RBP13.57□□□□□ -0.24
LAMA4-220ENST00000523765 ZC3H4Q9UPT8 1303 aaKnown RBP13.57□□□□□ -0.24
LAMA4-220ENST00000523765 PTCD1O75127 700 aaKnown RBP13.56□□□□□ -0.24
LAMA4-220ENST00000523765 CARD14Q9BXL6 1004 aa13.56□□□□□ -0.24
LAMA4-220ENST00000523765 PRDM10Q9NQV6 1147 aa13.56□□□□□ -0.24
LAMA4-220ENST00000523765 CREBZFQ9NS37 354 aa13.56□□□□□ -0.24
LAMA4-220ENST00000523765 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.56□□□□□ -0.24
LAMA4-220ENST00000523765 ANKRD31Q8N7Z5 1873 aa13.56□□□□□ -0.24
LAMA4-220ENST00000523765 CNTNAP1P78357 1384 aa13.56□□□□□ -0.24
LAMA4-220ENST00000523765 CARMIL3Q8ND23 1372 aa13.56□□□□□ -0.24
LAMA4-220ENST00000523765 FER1L6Q2WGJ9 1857 aa13.55□□□□□ -0.24
LAMA4-220ENST00000523765 FXR2P51116 673 aaKnown RBP eCLIP13.55□□□□□ -0.24
LAMA4-220ENST00000523765 COL11A2P13942 1736 aaPredicted RBP13.55□□□□□ -0.24
LAMA4-220ENST00000523765 VEGFBP49765 207 aa13.54□□□□□ -0.24
LAMA4-220ENST00000523765 LBX1P52954 281 aa13.54□□□□□ -0.24
LAMA4-220ENST00000523765 INTS5Q6P9B9 1019 aaKnown RBP13.54□□□□□ -0.24
LAMA4-220ENST00000523765 CACNA1SQ13698 1873 aa13.53□□□□□ -0.24
LAMA4-220ENST00000523765 ERVV-2B6SEH9 535 aa13.53□□□□□ -0.24
LAMA4-220ENST00000523765 USPL1Q5W0Q7 1092 aa13.53□□□□□ -0.24
LAMA4-220ENST00000523765 CHADLQ6NUI6 762 aa13.53□□□□□ -0.24
LAMA4-220ENST00000523765 ABHD8Q96I13 439 aa13.53□□□□□ -0.24
LAMA4-220ENST00000523765 WASHC2AQ641Q2 1341 aa13.53□□□□□ -0.24
LAMA4-220ENST00000523765 NFIXQ14938 502 aa13.52□□□□□ -0.25
LAMA4-220ENST00000523765 PASKQ96RG2 1323 aa13.51□□□□□ -0.25
LAMA4-220ENST00000523765 CTCFP49711 727 aaPredicted RBP13.51□□□□□ -0.25
LAMA4-220ENST00000523765 EIF4A2Q14240 407 aaKnown RBP13.51□□□□□ -0.25
LAMA4-220ENST00000523765 BCL2L12Q9HB09 334 aa13.51□□□□□ -0.25
LAMA4-220ENST00000523765 DDNO94850 711 aaPredicted RBP13.5□□□□□ -0.25
LAMA4-220ENST00000523765 HSPA8P11142 646 aaKnown RBP13.5□□□□□ -0.25
LAMA4-220ENST00000523765 CABP4P57796 275 aa13.5□□□□□ -0.25
LAMA4-220ENST00000523765 C2CD5Q86YS7 1000 aa13.5□□□□□ -0.25
LAMA4-220ENST00000523765 TTLL6Q8N841 843 aa13.5□□□□□ -0.25
LAMA4-220ENST00000523765 WBP1LQ9NX94 342 aa13.5□□□□□ -0.25
LAMA4-220ENST00000523765 POLKQ9UBT6 870 aa13.5□□□□□ -0.25
LAMA4-220ENST00000523765 SCN11AQ9UI33 1791 aa13.5□□□□□ -0.25
LAMA4-220ENST00000523765 NFATC2IPQ8NCF5 419 aa13.49□□□□□ -0.25
LAMA4-220ENST00000523765 ADAMTSL1Q8N6G6 1762 aa13.48□□□□□ -0.25
LAMA4-220ENST00000523765 SOS1Q07889 1333 aaPredicted RBP13.48□□□□□ -0.25
LAMA4-220ENST00000523765 SERPINB2P05120 415 aa13.48□□□□□ -0.25
LAMA4-220ENST00000523765 ERFEQ4G0M1 354 aa13.48□□□□□ -0.25
LAMA4-220ENST00000523765 DNAJC10Q8IXB1 793 aa13.48□□□□□ -0.25
LAMA4-220ENST00000523765 CCDC24Q8N4L8 307 aa13.48□□□□□ -0.25
LAMA4-220ENST00000523765 SLX4Q8IY92 1834 aa13.48□□□□□ -0.25
LAMA4-220ENST00000523765 C21orf2O43822 256 aa13.47□□□□□ -0.25
LAMA4-220ENST00000523765 ITGBL1O95965 494 aaPredicted RBP13.47□□□□□ -0.25
LAMA4-220ENST00000523765 DPY19L2Q6NUT2 758 aa13.47□□□□□ -0.25
LAMA4-220ENST00000523765 ZNF530Q6P9A1 599 aaPredicted RBP13.47□□□□□ -0.25
LAMA4-220ENST00000523765 AIDAQ96BJ3 306 aa13.47□□□□□ -0.25
LAMA4-220ENST00000523765 ZPR1O75312 459 aa13.46□□□□□ -0.25
LAMA4-220ENST00000523765 AEBP1Q8IUX7 1158 aa13.46□□□□□ -0.25
LAMA4-220ENST00000523765 PCDH10Q9P2E7 1040 aa13.46□□□□□ -0.25
LAMA4-220ENST00000523765 SCN4AP35499 1836 aa13.46□□□□□ -0.26
LAMA4-220ENST00000523765 COL15A1P39059 1388 aa13.45□□□□□ -0.26
LAMA4-220ENST00000523765 CCDC85CA6NKD9 419 aa13.45□□□□□ -0.26
LAMA4-220ENST00000523765 TNNT2P45379 298 aaPredicted RBP13.45□□□□□ -0.26
LAMA4-220ENST00000523765 NARFQ9UHQ1 456 aa13.45□□□□□ -0.26
LAMA4-220ENST00000523765 THSD7BQ9C0I4 1608 aa13.44□□□□□ -0.26
LAMA4-220ENST00000523765 TMEM88BA6NKF7 163 aa13.44□□□□□ -0.26
LAMA4-220ENST00000523765 H0YIN7 160 aa13.44□□□□□ -0.26
LAMA4-220ENST00000523765 MLLT1Q03111 559 aaPredicted RBP13.44□□□□□ -0.26
LAMA4-220ENST00000523765 BICDL1Q6ZP65 573 aa13.44□□□□□ -0.26
LAMA4-220ENST00000523765 CCER1Q8TC90 406 aaPredicted RBP13.44□□□□□ -0.26
LAMA4-220ENST00000523765 ZBTB1Q9Y2K1 713 aa13.44□□□□□ -0.26
LAMA4-220ENST00000523765 ARFGEF2Q9Y6D5 1785 aa13.44□□□□□ -0.26
LAMA4-220ENST00000523765 CYP19A1P11511 503 aaPredicted RBP13.43□□□□□ -0.26
LAMA4-220ENST00000523765 RGS19P49795 217 aa13.43□□□□□ -0.26
LAMA4-220ENST00000523765 MTHFSP49914 203 aa13.43□□□□□ -0.26
LAMA4-220ENST00000523765 ZNF622Q969S3 477 aaKnown RBP eCLIP13.43□□□□□ -0.26
LAMA4-220ENST00000523765 TAF1DQ9H5J8 278 aaPredicted RBP13.43□□□□□ -0.26
LAMA4-220ENST00000523765 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
LAMA4-220ENST00000523765 HSP90AB1P08238 724 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms