RNA–Protein interactions for RNA: ENST00000522712.6

C11orf49-205, Transcript of chromosome 11 open reading frame 49, humanhuman

TSL 2

Gene C11orf49, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf49-205ENST00000522712 ZPR1O75312 459 aa11.54□□□□□ -0.56
C11orf49-205ENST00000522712 CANXP27824 592 aaKnown RBP11.54□□□□□ -0.56
C11orf49-205ENST00000522712 FKBP8Q14318 412 aa11.54□□□□□ -0.56
C11orf49-205ENST00000522712 TEX13AQ9BXU3 409 aaPredicted RBP11.54□□□□□ -0.56
C11orf49-205ENST00000522712 PARP3Q9Y6F1 533 aa11.54□□□□□ -0.56
C11orf49-205ENST00000522712 MYBBP1AQ9BQG0 1328 aaKnown RBP11.54□□□□□ -0.56
C11orf49-205ENST00000522712 USP42Q9H9J4 1324 aaKnown RBP11.54□□□□□ -0.56
C11orf49-205ENST00000522712 SIPA1L3O60292 1781 aaPredicted RBP11.54□□□□□ -0.56
C11orf49-205ENST00000522712 UBR2Q8IWV8 1755 aa11.54□□□□□ -0.56
C11orf49-205ENST00000522712 HEG1Q9ULI3 1381 aa11.54□□□□□ -0.56
C11orf49-205ENST00000522712 C4AP0C0L4 1744 aa11.53□□□□□ -0.56
C11orf49-205ENST00000522712 YBX3P16989 372 aaKnown RBP eCLIP11.53□□□□□ -0.56
C11orf49-205ENST00000522712 MAPK8IP3Q9UPT6 1336 aa11.53□□□□□ -0.56
C11orf49-205ENST00000522712 GOLGB1Q14789 3259 aaKnown RBP11.52□□□□□ -0.56
C11orf49-205ENST00000522712 GRIN3BO60391 1043 aa11.52□□□□□ -0.57
C11orf49-205ENST00000522712 TAF7Q15545 349 aaPredicted RBP11.52□□□□□ -0.57
C11orf49-205ENST00000522712 NFE2L2Q16236 605 aa11.52□□□□□ -0.57
C11orf49-205ENST00000522712 USPL1Q5W0Q7 1092 aa11.52□□□□□ -0.57
C11orf49-205ENST00000522712 CHD4Q14839 1912 aa11.52□□□□□ -0.57
C11orf49-205ENST00000522712 COL15A1P39059 1388 aa11.52□□□□□ -0.57
C11orf49-205ENST00000522712 A1BGP04217 495 aa11.51□□□□□ -0.57
C11orf49-205ENST00000522712 EIF5P55010 431 aaKnown RBP11.51□□□□□ -0.57
C11orf49-205ENST00000522712 PRKRIP1Q9H875 184 aaPredicted RBP11.51□□□□□ -0.57
C11orf49-205ENST00000522712 MIS18AQ9NYP9 233 aa11.51□□□□□ -0.57
C11orf49-205ENST00000522712 NARFQ9UHQ1 456 aa11.51□□□□□ -0.57
C11orf49-205ENST00000522712 WWC3Q9ULE0 1092 aa11.51□□□□□ -0.57
C11orf49-205ENST00000522712 SNRPA1P09661 255 aaKnown RBP11.5□□□□□ -0.57
C11orf49-205ENST00000522712 TM4SF1P30408 202 aa11.5□□□□□ -0.57
C11orf49-205ENST00000522712 DDR1Q08345 913 aa11.5□□□□□ -0.57
C11orf49-205ENST00000522712 THUMPD2Q9BTF0 503 aaKnown RBP11.5□□□□□ -0.57
C11orf49-205ENST00000522712 ZNF330Q9Y3S2 320 aaPredicted RBP11.5□□□□□ -0.57
C11orf49-205ENST00000522712 USP16Q9Y5T5 823 aa11.5□□□□□ -0.57
C11orf49-205ENST00000522712 DLG5Q8TDM6 1919 aa11.5□□□□□ -0.57
C11orf49-205ENST00000522712 A0A087WZG4 1122 aa11.49□□□□□ -0.57
C11orf49-205ENST00000522712 PRAMEF22A3QJZ6 481 aa11.49□□□□□ -0.57
C11orf49-205ENST00000522712 TGFB2P61812 414 aa11.49□□□□□ -0.57
C11orf49-205ENST00000522712 BCL2L12Q9HB09 334 aa11.49□□□□□ -0.57
C11orf49-205ENST00000522712 A0A0G2JLW4 131 aa11.48□□□□□ -0.57
C11orf49-205ENST00000522712 POLRMTO00411 1230 aaKnown RBP11.48□□□□□ -0.57
C11orf49-205ENST00000522712 IL6STP40189 918 aaPredicted RBP11.48□□□□□ -0.57
C11orf49-205ENST00000522712 RIPK4P57078 832 aa11.48□□□□□ -0.57
C11orf49-205ENST00000522712 NFIXQ14938 502 aa11.48□□□□□ -0.57
C11orf49-205ENST00000522712 WDR43Q15061 677 aaKnown RBP eCLIP11.48□□□□□ -0.57
C11orf49-205ENST00000522712 NPM2Q86SE8 214 aaKnown RBP11.48□□□□□ -0.57
C11orf49-205ENST00000522712 CCDC146Q8IYE0 955 aa11.48□□□□□ -0.57
C11orf49-205ENST00000522712 PNISRQ8TF01 805 aaKnown RBP11.48□□□□□ -0.57
C11orf49-205ENST00000522712 RNF216Q9NWF9 866 aaPredicted RBP11.48□□□□□ -0.57
C11orf49-205ENST00000522712 TBC1D2BQ9UPU7 963 aa11.48□□□□□ -0.57
C11orf49-205ENST00000522712 C10orf71Q711Q0 1435 aa11.48□□□□□ -0.57
C11orf49-205ENST00000522712 KIF13BQ9NQT8 1826 aa11.47□□□□□ -0.57
C11orf49-205ENST00000522712 NPM3O75607 178 aaKnown RBP11.47□□□□□ -0.57
C11orf49-205ENST00000522712 DPEP1P16444 411 aa11.47□□□□□ -0.57
C11orf49-205ENST00000522712 HOXD11P31277 338 aaPredicted RBP11.47□□□□□ -0.57
C11orf49-205ENST00000522712 TMPOP42166 694 aaKnown RBP11.47□□□□□ -0.57
C11orf49-205ENST00000522712 PIP4K2AP48426 406 aaPredicted RBP11.47□□□□□ -0.57
C11orf49-205ENST00000522712 ZNF784Q8NCA9 323 aaPredicted RBP11.47□□□□□ -0.57
C11orf49-205ENST00000522712 ADAMTS8Q9UP79 889 aa11.47□□□□□ -0.57
C11orf49-205ENST00000522712 PXDNLA1KZ92 1463 aa11.46□□□□□ -0.57
C11orf49-205ENST00000522712 NEUROD2Q15784 382 aa11.46□□□□□ -0.57
C11orf49-205ENST00000522712 BICDL1Q6ZP65 573 aa11.46□□□□□ -0.57
C11orf49-205ENST00000522712 RRP7AQ9Y3A4 280 aaKnown RBP11.46□□□□□ -0.57
C11orf49-205ENST00000522712 N4BP2Q86UW6 1770 aaPredicted RBP11.46□□□□□ -0.58
C11orf49-205ENST00000522712 ZNF316A6NFI3 1004 aaPredicted RBP11.45□□□□□ -0.58
C11orf49-205ENST00000522712 SERPINB2P05120 415 aa11.45□□□□□ -0.58
C11orf49-205ENST00000522712 EIF4A1P60842 406 aaKnown RBP11.45□□□□□ -0.58
C11orf49-205ENST00000522712 RUNDC1Q96C34 613 aa11.45□□□□□ -0.58
C11orf49-205ENST00000522712 BCS1LQ9Y276 419 aa11.45□□□□□ -0.58
C11orf49-205ENST00000522712 NBPF26B4DH59 902 aa11.44□□□□□ -0.58
C11orf49-205ENST00000522712 GIGYF1O75420 1035 aaPredicted RBP11.44□□□□□ -0.58
C11orf49-205ENST00000522712 CAMTA2O94983 1202 aa11.44□□□□□ -0.58
C11orf49-205ENST00000522712 KCNA3P22001 575 aa11.44□□□□□ -0.58
C11orf49-205ENST00000522712 LMOD3Q0VAK6 560 aa11.44□□□□□ -0.58
C11orf49-205ENST00000522712 TBC1D9BQ66K14 1250 aa11.44□□□□□ -0.58
C11orf49-205ENST00000522712 NBPF10Q6P3W6 841 aaKnown RBP11.44□□□□□ -0.58
C11orf49-205ENST00000522712 DZIP3Q86Y13 1208 aaKnown RBP11.44□□□□□ -0.58
C11orf49-205ENST00000522712 NBPF15Q8N660 670 aa11.44□□□□□ -0.58
C11orf49-205ENST00000522712 TSPYL4Q9UJ04 414 aa11.44□□□□□ -0.58
C11orf49-205ENST00000522712 KIAA1551Q9HCM1 1747 aa11.43□□□□□ -0.58
C11orf49-205ENST00000522712 CHRNA5P30532 468 aa11.43□□□□□ -0.58
C11orf49-205ENST00000522712 PIM2Q9P1W9 311 aa11.43□□□□□ -0.58
C11orf49-205ENST00000522712 AFDNP55196 1824 aaKnown RBP11.42□□□□□ -0.58
C11orf49-205ENST00000522712 KDM3BQ7LBC6 1761 aa11.42□□□□□ -0.58
C11orf49-205ENST00000522712 SETDB2Q96T68 719 aa11.42□□□□□ -0.58
C11orf49-205ENST00000522712 DALRD3Q5D0E6 543 aaKnown RBP11.41□□□□□ -0.58
C11orf49-205ENST00000522712 ARHGAP27Q6ZUM4 889 aa11.41□□□□□ -0.58
C11orf49-205ENST00000522712 BABAM1Q9NWV8 329 aa11.41□□□□□ -0.58
C11orf49-205ENST00000522712 TRIM35Q9UPQ4 493 aa11.41□□□□□ -0.58
C11orf49-205ENST00000522712 CCDC184Q52MB2 194 aa11.4□□□□□ -0.58
C11orf49-205ENST00000522712 CLEC4GQ6UXB4 293 aa11.4□□□□□ -0.58
C11orf49-205ENST00000522712 CCDC24Q8N4L8 307 aa11.4□□□□□ -0.58
C11orf49-205ENST00000522712 NGEFQ8N5V2 710 aa11.4□□□□□ -0.58
C11orf49-205ENST00000522712 ZNF652Q9Y2D9 606 aa11.4□□□□□ -0.58
C11orf49-205ENST00000522712 LAS1LQ9Y4W2 734 aaKnown RBP11.4□□□□□ -0.58
C11orf49-205ENST00000522712 NRXN2Q9P2S2 1712 aa11.4□□□□□ -0.58
C11orf49-205ENST00000522712 BRCA1P38398 1863 aaKnown RBP11.4□□□□□ -0.59
C11orf49-205ENST00000522712 CARMIL3Q8ND23 1372 aa11.4□□□□□ -0.59
C11orf49-205ENST00000522712 SCN7AQ01118 1682 aa11.4□□□□□ -0.59
C11orf49-205ENST00000522712 APAF1O14727 1248 aa11.39□□□□□ -0.59
C11orf49-205ENST00000522712 NPHP1O15259 732 aa11.39□□□□□ -0.59
C11orf49-205ENST00000522712 EIF2S2P20042 333 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms