RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 RFX1P22670 979 aa8.8□□□□□ -1
HMGB1P1-201ENST00000522557 SRPK2P78362 688 aaKnown RBP8.8□□□□□ -1
HMGB1P1-201ENST00000522557 FOXK2Q01167 660 aa8.8□□□□□ -1
HMGB1P1-201ENST00000522557 FOXR1Q6PIV2 292 aa8.8□□□□□ -1
HMGB1P1-201ENST00000522557 LARP1Q6PKG0 1096 aaKnown RBP8.8□□□□□ -1
HMGB1P1-201ENST00000522557 SLC9A9Q8IVB4 645 aa8.8□□□□□ -1
HMGB1P1-201ENST00000522557 TSEN2Q8NCE0 465 aaKnown RBP8.8□□□□□ -1
HMGB1P1-201ENST00000522557 ZDHHC1Q8WTX9 485 aa8.8□□□□□ -1
HMGB1P1-201ENST00000522557 CSB-PGBD3P0DP91 1061 aa8.79□□□□□ -1
HMGB1P1-201ENST00000522557 TRIM26Q12899 539 aaPredicted RBP8.79□□□□□ -1
HMGB1P1-201ENST00000522557 PTK7Q13308 1070 aa8.79□□□□□ -1
HMGB1P1-201ENST00000522557 UBAP2LQ14157 1087 aaKnown RBP8.79□□□□□ -1
HMGB1P1-201ENST00000522557 PGBD3Q8N328 593 aa8.79□□□□□ -1
HMGB1P1-201ENST00000522557 STK17AQ9UEE5 414 aa8.79□□□□□ -1
HMGB1P1-201ENST00000522557 ATP4AP20648 1035 aa8.78□□□□□ -1
HMGB1P1-201ENST00000522557 L3MBTL2Q969R5 705 aa8.78□□□□□ -1
HMGB1P1-201ENST00000522557 TRAIPQ9BWF2 469 aa8.78□□□□□ -1
HMGB1P1-201ENST00000522557 TSPAN10Q9H1Z9 355 aaPredicted RBP8.78□□□□□ -1
HMGB1P1-201ENST00000522557 M0R2N6 131 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 LGR5O75473 907 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 NOS2P35228 1153 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 TXLNAP40222 546 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 SEC13P55735 322 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 DPYDQ12882 1025 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 TEAD4Q15561 434 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 SH3PXD2AQ5TCZ1 1133 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 WHAMMQ8TF30 809 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 TRERF1Q96PN7 1200 aa8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 RBM19Q9Y4C8 960 aaKnown RBP8.77□□□□□ -1.01
HMGB1P1-201ENST00000522557 ADAMTS2O95450 1211 aa8.76□□□□□ -1.01
HMGB1P1-201ENST00000522557 SLURP2P0DP57 97 aa8.76□□□□□ -1.01
HMGB1P1-201ENST00000522557 ARSJQ5FYB0 599 aaPredicted RBP8.76□□□□□ -1.01
HMGB1P1-201ENST00000522557 EFHC2Q5JST6 749 aa8.76□□□□□ -1.01
HMGB1P1-201ENST00000522557 CRISPLD1Q9H336 500 aa8.76□□□□□ -1.01
HMGB1P1-201ENST00000522557 A0A1W2PNR3 127 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 FAM196BA6NMK8 535 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L15C9J2P7 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L10C9JJH3 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L13C9JLJ4 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L12C9JPN9 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L11C9JVI0 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L21D6R901 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L18D6R9N7 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L22D6RA61 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L17D6RBQ6 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L19D6RCP7 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L20D6RJB6 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 PPP1R15AO75807 674 aaPredicted RBP8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 USP17L24Q0WX57 530 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 LBRQ14739 615 aaKnown RBP8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 NBPF1Q3BBV0 1214 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 ANKMY2Q8IV38 441 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 C1orf216Q8TAB5 229 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 ZIC5Q96T25 663 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 ZNF232Q9UNY5 417 aa8.75□□□□□ -1.01
HMGB1P1-201ENST00000522557 SERTM1A2A2V5 107 aa8.74□□□□□ -1.01
HMGB1P1-201ENST00000522557 C21orf2O43822 256 aa8.74□□□□□ -1.01
HMGB1P1-201ENST00000522557 SRSF11Q05519 484 aaKnown RBP8.74□□□□□ -1.01
HMGB1P1-201ENST00000522557 GAS2L2Q8NHY3 880 aa8.74□□□□□ -1.01
HMGB1P1-201ENST00000522557 HINFPQ9BQA5 517 aa8.74□□□□□ -1.01
HMGB1P1-201ENST00000522557 CFHR5Q9BXR6 569 aa8.74□□□□□ -1.01
HMGB1P1-201ENST00000522557 ZCCHC2Q9C0B9 1178 aaKnown RBP8.74□□□□□ -1.01
HMGB1P1-201ENST00000522557 MBIPQ9NS73 344 aa8.74□□□□□ -1.01
HMGB1P1-201ENST00000522557 IGF1RP08069 1367 aa8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 BNIP3LO60238 219 aa8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 TATP17735 454 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 ZNF385CQ66K41 422 aaPredicted RBP8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 C7orf43Q8WVR3 580 aa8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 KLRG1Q96E93 195 aa8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 ZDHHC3Q9NYG2 299 aa8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 HCN4Q9Y3Q4 1203 aa8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 ATAD2Q6PL18 1390 aa8.73□□□□□ -1.01
HMGB1P1-201ENST00000522557 EML1O00423 815 aa8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 MX2P20592 715 aa8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 PSMA6P60900 246 aaKnown RBP8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 LYPD4Q6UWN0 246 aa8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 BICDL1Q6ZP65 573 aa8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 RETREG2Q8NC44 543 aa8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 SCG3Q8WXD2 468 aaKnown RBP8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 ABHD17AQ96GS6 310 aa8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 NDFIP2Q9NV92 336 aa8.72□□□□□ -1.01
HMGB1P1-201ENST00000522557 PPP1R12BO60237 982 aaPredicted RBP8.71□□□□□ -1.02
HMGB1P1-201ENST00000522557 NLRP8Q86W28 1048 aa8.71□□□□□ -1.02
HMGB1P1-201ENST00000522557 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 FAM181BA6NEQ2 426 aa8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 CTBSQ01459 385 aa8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 SVOPQ8N4V2 548 aa8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 CHMP7Q8WUX9 453 aaPredicted RBP8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 PODXL2Q9NZ53 605 aa8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 HCN2Q9UL51 889 aa8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 PHF24Q9UPV7 400 aa8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 PCDHGC4Q9Y5F7 938 aa8.7□□□□□ -1.02
HMGB1P1-201ENST00000522557 C2CD2LO14523 706 aa8.69□□□□□ -1.02
HMGB1P1-201ENST00000522557 ATXN7O15265 892 aaPredicted RBP8.69□□□□□ -1.02
HMGB1P1-201ENST00000522557 CELA2BP08218 269 aaPredicted RBP8.69□□□□□ -1.02
HMGB1P1-201ENST00000522557 PDIA4P13667 645 aaKnown RBP8.69□□□□□ -1.02
HMGB1P1-201ENST00000522557 ACDQ96AP0 544 aa8.69□□□□□ -1.02
HMGB1P1-201ENST00000522557 ATXN7L1Q9ULK2 861 aaPredicted RBP8.69□□□□□ -1.02
HMGB1P1-201ENST00000522557 GJA3Q9Y6H8 435 aa8.69□□□□□ -1.02
HMGB1P1-201ENST00000522557 ARHGEF15O94989 841 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms