RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 EMILIN1Q9Y6C2 1016 aa15.55■□□□□ 0.08
CTNNA1-234ENST00000522227 VIRMAQ69YN4 1812 aaKnown RBP15.54■□□□□ 0.08
CTNNA1-234ENST00000522227 COL5A3P25940 1745 aaPredicted RBP15.54■□□□□ 0.08
CTNNA1-234ENST00000522227 GRM1Q13255 1194 aa15.54■□□□□ 0.08
CTNNA1-234ENST00000522227 DEFB115Q30KQ5 88 aa15.54■□□□□ 0.08
CTNNA1-234ENST00000522227 CLEC11AQ9Y240 323 aa15.54■□□□□ 0.08
CTNNA1-234ENST00000522227 ZPR1O75312 459 aa15.53■□□□□ 0.08
CTNNA1-234ENST00000522227 PAXIP1Q6ZW49 1069 aaPredicted RBP15.53■□□□□ 0.08
CTNNA1-234ENST00000522227 WDR33Q9C0J8 1336 aaKnown RBP15.52■□□□□ 0.08
CTNNA1-234ENST00000522227 C21orf2O43822 256 aa15.52■□□□□ 0.08
CTNNA1-234ENST00000522227 MAP2K1Q02750 393 aaPredicted RBP15.52■□□□□ 0.08
CTNNA1-234ENST00000522227 LDHDQ86WU2 507 aa15.52■□□□□ 0.08
CTNNA1-234ENST00000522227 ZNF622Q969S3 477 aaKnown RBP eCLIP15.52■□□□□ 0.08
CTNNA1-234ENST00000522227 ABT1Q9ULW3 272 aaKnown RBP15.52■□□□□ 0.08
CTNNA1-234ENST00000522227 H0YIN7 160 aa15.51■□□□□ 0.07
CTNNA1-234ENST00000522227 EYA1Q99502 592 aa15.51■□□□□ 0.07
CTNNA1-234ENST00000522227 ITGBL1O95965 494 aaPredicted RBP15.5■□□□□ 0.07
CTNNA1-234ENST00000522227 SERPINB2P05120 415 aa15.5■□□□□ 0.07
CTNNA1-234ENST00000522227 CABP4P57796 275 aa15.5■□□□□ 0.07
CTNNA1-234ENST00000522227 NFIXQ14938 502 aa15.5■□□□□ 0.07
CTNNA1-234ENST00000522227 BEGAINQ9BUH8 593 aa15.49■□□□□ 0.07
CTNNA1-234ENST00000522227 TAF1DQ9H5J8 278 aaPredicted RBP15.49■□□□□ 0.07
CTNNA1-234ENST00000522227 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.49■□□□□ 0.077e-9■□□□□ 8.5
CTNNA1-234ENST00000522227 CARMIL3Q8ND23 1372 aa15.49■□□□□ 0.07
CTNNA1-234ENST00000522227 AFDNP55196 1824 aaKnown RBP15.48■□□□□ 0.07
CTNNA1-234ENST00000522227 IQCA1LA6NCM1 817 aa15.48■□□□□ 0.07
CTNNA1-234ENST00000522227 RASSF10A6NK89 507 aa15.48■□□□□ 0.07
CTNNA1-234ENST00000522227 ERVV-2B6SEH9 535 aa15.48■□□□□ 0.07
CTNNA1-234ENST00000522227 BICDL1Q6ZP65 573 aa15.48■□□□□ 0.07
CTNNA1-234ENST00000522227 CCDC24Q8N4L8 307 aa15.48■□□□□ 0.07
CTNNA1-234ENST00000522227 MCOLN1Q9GZU1 580 aa15.48■□□□□ 0.07
CTNNA1-234ENST00000522227 MAP1SQ66K74 1059 aaPredicted RBP15.47■□□□□ 0.07
CTNNA1-234ENST00000522227 INTS5Q6P9B9 1019 aaKnown RBP15.47■□□□□ 0.07
CTNNA1-234ENST00000522227 PUS7Q96PZ0 661 aaKnown RBP15.47■□□□□ 0.07
CTNNA1-234ENST00000522227 NCAPD2Q15021 1401 aa15.46■□□□□ 0.07
CTNNA1-234ENST00000522227 TAOK3Q9H2K8 898 aa15.46■□□□□ 0.07
CTNNA1-234ENST00000522227 ZNF831Q5JPB2 1677 aa15.46■□□□□ 0.07
CTNNA1-234ENST00000522227 DLEC1Q9Y238 1755 aa15.46■□□□□ 0.07
CTNNA1-234ENST00000522227 TONSLQ96HA7 1378 aa15.46■□□□□ 0.07
CTNNA1-234ENST00000522227 DICER1Q9UPY3 1922 aaKnown RBP15.45■□□□□ 0.06
CTNNA1-234ENST00000522227 CNTROBQ8N137 903 aa15.45■□□□□ 0.06
CTNNA1-234ENST00000522227 FMR1Q06787 632 aaKnown RBP eCLIP15.44■□□□□ 0.063e-6■■■■□ 21.6
CTNNA1-234ENST00000522227 CYP4F22Q6NT55 531 aa15.44■□□□□ 0.06
CTNNA1-234ENST00000522227 DNAJC10Q8IXB1 793 aa15.44■□□□□ 0.06
CTNNA1-234ENST00000522227 CAPNS2Q96L46 248 aa15.44■□□□□ 0.06
CTNNA1-234ENST00000522227 KIF24Q5T7B8 1368 aa15.44■□□□□ 0.06
CTNNA1-234ENST00000522227 DGKZQ13574 1117 aa15.43■□□□□ 0.06
CTNNA1-234ENST00000522227 ZNF530Q6P9A1 599 aaPredicted RBP15.43■□□□□ 0.06
CTNNA1-234ENST00000522227 HSP90AB1P08238 724 aaKnown RBP15.42■□□□□ 0.06
CTNNA1-234ENST00000522227 NFATC2IPQ8NCF5 419 aa15.42■□□□□ 0.06
CTNNA1-234ENST00000522227 GPR101Q96P66 508 aaPredicted RBP15.42■□□□□ 0.06
CTNNA1-234ENST00000522227 BCL2L12Q9HB09 334 aa15.42■□□□□ 0.06
CTNNA1-234ENST00000522227 HACL1Q9UJ83 578 aa15.42■□□□□ 0.06
CTNNA1-234ENST00000522227 SOS1Q07889 1333 aaPredicted RBP15.42■□□□□ 0.06
CTNNA1-234ENST00000522227 ADAMTS7Q9UKP4 1686 aa15.41■□□□□ 0.06
CTNNA1-234ENST00000522227 TJP1Q07157 1748 aa15.41■□□□□ 0.06
CTNNA1-234ENST00000522227 ST20-MTHFSA0A0A6YYL1 179 aa15.41■□□□□ 0.06
CTNNA1-234ENST00000522227 AOC2O75106 756 aa15.41■□□□□ 0.06
CTNNA1-234ENST00000522227 EPHX2P34913 555 aa15.41■□□□□ 0.06
CTNNA1-234ENST00000522227 SOX10P56693 466 aa15.41■□□□□ 0.06
CTNNA1-234ENST00000522227 L3MBTL3Q96JM7 780 aaPredicted RBP15.41■□□□□ 0.06
CTNNA1-234ENST00000522227 TESK2Q96S53 571 aa15.41■□□□□ 0.06
CTNNA1-234ENST00000522227 NARFQ9UHQ1 456 aa15.41■□□□□ 0.06
CTNNA1-234ENST00000522227 FER1L6Q2WGJ9 1857 aa15.41■□□□□ 0.06
CTNNA1-234ENST00000522227 ZNF541Q9H0D2 1346 aa15.41■□□□□ 0.06
CTNNA1-234ENST00000522227 KIF20BQ96Q89 1820 aa15.4■□□□□ 0.06
CTNNA1-234ENST00000522227 PDE4DIPQ5VU43 2346 aa15.4■□□□□ 0.06
CTNNA1-234ENST00000522227 MTHFSP49914 203 aa15.4■□□□□ 0.06
CTNNA1-234ENST00000522227 RNF123Q5XPI4 1314 aa15.4■□□□□ 0.06
CTNNA1-234ENST00000522227 WASHC2AQ641Q2 1341 aa15.4■□□□□ 0.06
CTNNA1-234ENST00000522227 NRXN2Q9P2S2 1712 aa15.4■□□□□ 0.06
CTNNA1-234ENST00000522227 TNRC18O15417 2968 aaPredicted RBP15.39■□□□□ 0.05
CTNNA1-234ENST00000522227 COL15A1P39059 1388 aa15.39■□□□□ 0.05
CTNNA1-234ENST00000522227 PLEKHO1Q53GL0 409 aaPredicted RBP15.39■□□□□ 0.05
CTNNA1-234ENST00000522227 LTBP3Q9NS15 1303 aa15.39■□□□□ 0.05
CTNNA1-234ENST00000522227 CASP8AP2Q9UKL3 1982 aa15.38■□□□□ 0.05
CTNNA1-234ENST00000522227 SCN4AP35499 1836 aa15.38■□□□□ 0.05
CTNNA1-234ENST00000522227 ECE1P42892 770 aa15.38■□□□□ 0.05
CTNNA1-234ENST00000522227 EIF4A2Q14240 407 aaKnown RBP15.38■□□□□ 0.05
CTNNA1-234ENST00000522227 DDX21Q9NR30 783 aaKnown RBP eCLIP15.38■□□□□ 0.05
CTNNA1-234ENST00000522227 ZBTB1Q9Y2K1 713 aa15.38■□□□□ 0.05
CTNNA1-234ENST00000522227 PDE6BP35913 854 aa15.37■□□□□ 0.05
CTNNA1-234ENST00000522227 C1orf141Q5JVX7 400 aa15.37■□□□□ 0.05
CTNNA1-234ENST00000522227 PRPF40BQ6NWY9 871 aaKnown RBP15.37■□□□□ 0.05
CTNNA1-234ENST00000522227 CACNA1SQ13698 1873 aa15.36■□□□□ 0.05
CTNNA1-234ENST00000522227 NPHP1O15259 732 aa15.36■□□□□ 0.05
CTNNA1-234ENST00000522227 CYP19A1P11511 503 aaPredicted RBP15.36■□□□□ 0.05
CTNNA1-234ENST00000522227 CANXP27824 592 aaKnown RBP15.36■□□□□ 0.05
CTNNA1-234ENST00000522227 TNNT2P45379 298 aaPredicted RBP15.36■□□□□ 0.05
CTNNA1-234ENST00000522227 ZNF277Q9NRM2 450 aaPredicted RBP15.36■□□□□ 0.05
CTNNA1-234ENST00000522227 COL11A2P13942 1736 aaPredicted RBP15.36■□□□□ 0.05
CTNNA1-234ENST00000522227 ANKRD31Q8N7Z5 1873 aa15.35■□□□□ 0.05
CTNNA1-234ENST00000522227 TBC1D9BQ66K14 1250 aa15.35■□□□□ 0.05
CTNNA1-234ENST00000522227 PNMA8AQ86V59 439 aaPredicted RBP15.35■□□□□ 0.05
CTNNA1-234ENST00000522227 BRIP1Q9BX63 1249 aa15.35■□□□□ 0.05
CTNNA1-234ENST00000522227 SLX4Q8IY92 1834 aa15.35■□□□□ 0.05
CTNNA1-234ENST00000522227 TRAF5O00463 557 aa15.34■□□□□ 0.05
CTNNA1-234ENST00000522227 SLC39A6Q13433 755 aa15.34■□□□□ 0.05
CTNNA1-234ENST00000522227 PRPF38BQ5VTL8 546 aaKnown RBP15.34■□□□□ 0.05
CTNNA1-234ENST00000522227 PRR5LQ6MZQ0 368 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms