RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 DNAJC10Q8IXB1 793 aa8.95□□□□□ -0.98
SPIDR-218ENST00000522222 SLC16A10Q8TF71 515 aa8.95□□□□□ -0.98
SPIDR-218ENST00000522222 RTF1Q92541 710 aaKnown RBP8.95□□□□□ -0.98
SPIDR-218ENST00000522222 KDM3BQ7LBC6 1761 aa8.94□□□□□ -0.98
SPIDR-218ENST00000522222 HTATSF1O43719 755 aaKnown RBP8.94□□□□□ -0.98
SPIDR-218ENST00000522222 CRKLP46109 303 aaKnown RBP8.94□□□□□ -0.98
SPIDR-218ENST00000522222 ZNF790Q6PG37 636 aa8.94□□□□□ -0.98
SPIDR-218ENST00000522222 CCDC146Q8IYE0 955 aa8.94□□□□□ -0.98
SPIDR-218ENST00000522222 TTC5Q8N0Z6 440 aa8.94□□□□□ -0.98
SPIDR-218ENST00000522222 FLAD1Q8NFF5 587 aa8.94□□□□□ -0.98
SPIDR-218ENST00000522222 THUMPD2Q9BTF0 503 aaKnown RBP8.94□□□□□ -0.98
SPIDR-218ENST00000522222 HEG1Q9ULI3 1381 aa8.94□□□□□ -0.98
SPIDR-218ENST00000522222 KCNQ3O43525 872 aa8.93□□□□□ -0.98
SPIDR-218ENST00000522222 RC3H1Q5TC82 1133 aaKnown RBP8.93□□□□□ -0.98
SPIDR-218ENST00000522222 ZNF496Q96IT1 587 aaPredicted RBP8.93□□□□□ -0.98
SPIDR-218ENST00000522222 PNNQ9H307 717 aaKnown RBP8.93□□□□□ -0.98
SPIDR-218ENST00000522222 TSHZ2Q9NRE2 1034 aa8.93□□□□□ -0.98
SPIDR-218ENST00000522222 RTCBQ9Y3I0 505 aaKnown RBP8.93□□□□□ -0.98
SPIDR-218ENST00000522222 LAMB4A4D0S4 1761 aa8.92□□□□□ -0.98
SPIDR-218ENST00000522222 SOS1Q07889 1333 aaPredicted RBP8.92□□□□□ -0.98
SPIDR-218ENST00000522222 BTBD11A6QL63 1104 aa8.92□□□□□ -0.98
SPIDR-218ENST00000522222 RPS6KA4O75676 772 aa8.92□□□□□ -0.98
SPIDR-218ENST00000522222 CYP19A1P11511 503 aaPredicted RBP8.92□□□□□ -0.98
SPIDR-218ENST00000522222 POLD1P28340 1107 aa8.92□□□□□ -0.98
SPIDR-218ENST00000522222 CCDC184Q52MB2 194 aa8.92□□□□□ -0.98
SPIDR-218ENST00000522222 INTS5Q6P9B9 1019 aaKnown RBP8.92□□□□□ -0.98
SPIDR-218ENST00000522222 ARXQ96QS3 562 aa8.92□□□□□ -0.98
SPIDR-218ENST00000522222 CCDC87Q9NVE4 849 aa8.92□□□□□ -0.98
SPIDR-218ENST00000522222 RRP7AQ9Y3A4 280 aaKnown RBP8.92□□□□□ -0.98
SPIDR-218ENST00000522222 SCN7AQ01118 1682 aa8.91□□□□□ -0.98
SPIDR-218ENST00000522222 COL15A1P39059 1388 aa8.91□□□□□ -0.98
SPIDR-218ENST00000522222 ZBED9Q6R2W3 1325 aa8.91□□□□□ -0.98
SPIDR-218ENST00000522222 TMPOP42166 694 aaKnown RBP8.91□□□□□ -0.98
SPIDR-218ENST00000522222 HNRNPUQ00839 825 aaKnown RBP eCLIP8.91□□□□□ -0.98
SPIDR-218ENST00000522222 VSIG10Q8N0Z9 540 aa8.91□□□□□ -0.98
SPIDR-218ENST00000522222 RUNDC1Q96C34 613 aa8.91□□□□□ -0.98
SPIDR-218ENST00000522222 FMNL2Q96PY5 1086 aa8.91□□□□□ -0.98
SPIDR-218ENST00000522222 FHDC1Q9C0D6 1143 aaPredicted RBP8.91□□□□□ -0.98
SPIDR-218ENST00000522222 ADAMTS8Q9UP79 889 aa8.91□□□□□ -0.98
SPIDR-218ENST00000522222 ZBTB1Q9Y2K1 713 aa8.91□□□□□ -0.98
SPIDR-218ENST00000522222 USP42Q9H9J4 1324 aaKnown RBP8.9□□□□□ -0.98
SPIDR-218ENST00000522222 RIPK4P57078 832 aa8.9□□□□□ -0.98
SPIDR-218ENST00000522222 SAMD1Q6SPF0 538 aaPredicted RBP8.9□□□□□ -0.98
SPIDR-218ENST00000522222 ARHGEF1Q92888 912 aaKnown RBP8.9□□□□□ -0.98
SPIDR-218ENST00000522222 SRP68Q9UHB9 627 aaKnown RBP8.9□□□□□ -0.98
SPIDR-218ENST00000522222 STARD3NLO95772 234 aa8.89□□□□□ -0.99
SPIDR-218ENST00000522222 RFC4P35249 363 aa8.89□□□□□ -0.99
SPIDR-218ENST00000522222 LMOD3Q0VAK6 560 aa8.89□□□□□ -0.99
SPIDR-218ENST00000522222 TAF7Q15545 349 aaPredicted RBP8.89□□□□□ -0.99
SPIDR-218ENST00000522222 TRAPPC3LQ5T215 181 aa8.89□□□□□ -0.99
SPIDR-218ENST00000522222 KLHL34Q8N239 644 aa8.89□□□□□ -0.99
SPIDR-218ENST00000522222 MIS18AQ9NYP9 233 aa8.89□□□□□ -0.99
SPIDR-218ENST00000522222 BCORQ6W2J9 1755 aa8.89□□□□□ -0.99
SPIDR-218ENST00000522222 PRAMEF22A3QJZ6 481 aa8.88□□□□□ -0.99
SPIDR-218ENST00000522222 MMP10P09238 476 aa8.88□□□□□ -0.99
SPIDR-218ENST00000522222 GYS1P13807 737 aa8.88□□□□□ -0.99
SPIDR-218ENST00000522222 CANXP27824 592 aaKnown RBP8.88□□□□□ -0.99
SPIDR-218ENST00000522222 NEUROD2Q15784 382 aa8.88□□□□□ -0.99
SPIDR-218ENST00000522222 PNISRQ8TF01 805 aaKnown RBP8.88□□□□□ -0.99
SPIDR-218ENST00000522222 SYT17Q9BSW7 474 aa8.88□□□□□ -0.99
SPIDR-218ENST00000522222 MRS2Q9HD23 443 aa8.88□□□□□ -0.99
SPIDR-218ENST00000522222 C10orf71Q711Q0 1435 aa8.88□□□□□ -0.99
SPIDR-218ENST00000522222 SNRPA1P09661 255 aaKnown RBP8.87□□□□□ -0.99
SPIDR-218ENST00000522222 NLGN2Q8NFZ4 835 aa8.87□□□□□ -0.99
SPIDR-218ENST00000522222 TEX13AQ9BXU3 409 aaPredicted RBP8.87□□□□□ -0.99
SPIDR-218ENST00000522222 TSPYL4Q9UJ04 414 aa8.87□□□□□ -0.99
SPIDR-218ENST00000522222 TRIM35Q9UPQ4 493 aa8.87□□□□□ -0.99
SPIDR-218ENST00000522222 KIAA1551Q9HCM1 1747 aa8.86□□□□□ -0.99
SPIDR-218ENST00000522222 APAF1O14727 1248 aa8.86□□□□□ -0.99
SPIDR-218ENST00000522222 A1BGP04217 495 aa8.86□□□□□ -0.99
SPIDR-218ENST00000522222 PIP4K2AP48426 406 aaPredicted RBP8.86□□□□□ -0.99
SPIDR-218ENST00000522222 EIF5P55010 431 aaKnown RBP8.86□□□□□ -0.99
SPIDR-218ENST00000522222 EIF4A1P60842 406 aaKnown RBP8.86□□□□□ -0.99
SPIDR-218ENST00000522222 USPL1Q5W0Q7 1092 aa8.86□□□□□ -0.99
SPIDR-218ENST00000522222 ZNF330Q9Y3S2 320 aaPredicted RBP8.86□□□□□ -0.99
SPIDR-218ENST00000522222 USP16Q9Y5T5 823 aa8.86□□□□□ -0.99
SPIDR-218ENST00000522222 KIF13BQ9NQT8 1826 aa8.86□□□□□ -0.99
SPIDR-218ENST00000522222 PXDNLA1KZ92 1463 aa8.85□□□□□ -0.99
SPIDR-218ENST00000522222 HAX1O00165 279 aa8.85□□□□□ -0.99
SPIDR-218ENST00000522222 ABCB7O75027 752 aa8.85□□□□□ -0.99
SPIDR-218ENST00000522222 ZPR1O75312 459 aa8.85□□□□□ -0.99
SPIDR-218ENST00000522222 IL6STP40189 918 aaPredicted RBP8.85□□□□□ -0.99
SPIDR-218ENST00000522222 DDR1Q08345 913 aa8.85□□□□□ -0.99
SPIDR-218ENST00000522222 NLGN1Q8N2Q7 840 aa8.85□□□□□ -0.99
SPIDR-218ENST00000522222 BCL2L12Q9HB09 334 aa8.85□□□□□ -0.99
SPIDR-218ENST00000522222 PPP4R2Q9NY27 417 aa8.85□□□□□ -0.99
SPIDR-218ENST00000522222 NARFQ9UHQ1 456 aa8.85□□□□□ -0.99
SPIDR-218ENST00000522222 A0A087WZG4 1122 aa8.84□□□□□ -0.99
SPIDR-218ENST00000522222 NBPF26B4DH59 902 aa8.84□□□□□ -0.99
SPIDR-218ENST00000522222 GIGYF1O75420 1035 aaPredicted RBP8.84□□□□□ -0.99
SPIDR-218ENST00000522222 NBPF10Q6P3W6 841 aaKnown RBP8.84□□□□□ -0.99
SPIDR-218ENST00000522222 NBPF15Q8N660 670 aa8.84□□□□□ -0.99
SPIDR-218ENST00000522222 NRXN2Q9P2S2 1712 aa8.84□□□□□ -0.99
SPIDR-218ENST00000522222 CD2APQ9Y5K6 639 aa8.84□□□□□ -0.99
SPIDR-218ENST00000522222 AFDNP55196 1824 aaKnown RBP8.83□□□□□ -1
SPIDR-218ENST00000522222 SENP3-EIF4A1A0A087X0R7 540 aa8.83□□□□□ -1
SPIDR-218ENST00000522222 POLRMTO00411 1230 aaKnown RBP8.83□□□□□ -1
SPIDR-218ENST00000522222 CAMTA2O94983 1202 aa8.83□□□□□ -1
SPIDR-218ENST00000522222 NFIXQ14938 502 aa8.83□□□□□ -1
SPIDR-218ENST00000522222 ANP32EQ9BTT0 268 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms