RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 NAPBQ9H115 298 aa13.21□□□□□ -0.29
LAMA4-219ENST00000522006 CTNNBL1Q8WYA6 563 aaPredicted RBP13.21□□□□□ -0.29
LAMA4-219ENST00000522006 MKNK2Q9HBH9 465 aa13.21□□□□□ -0.29
LAMA4-219ENST00000522006 GSTTP1A0A1W2PQM5 241 aa13.21□□□□□ -0.29
LAMA4-219ENST00000522006 FGFR1OPO95684 399 aaKnown RBP13.21□□□□□ -0.29
LAMA4-219ENST00000522006 ALDH1L2Q3SY69 923 aa13.21□□□□□ -0.29
LAMA4-219ENST00000522006 SLC12A7Q9Y666 1083 aa13.21□□□□□ -0.29
LAMA4-219ENST00000522006 SUPT6HQ7KZ85 1726 aaKnown RBP13.21□□□□□ -0.3
LAMA4-219ENST00000522006 C20orf194Q5TEA3 1177 aa13.21□□□□□ -0.3
LAMA4-219ENST00000522006 CCDC97Q96F63 343 aaPredicted RBP13.21□□□□□ -0.3
LAMA4-219ENST00000522006 CCDC196A0A1B0GTZ2 297 aa13.2□□□□□ -0.3
LAMA4-219ENST00000522006 MICALCLQ6ZW33 695 aa13.2□□□□□ -0.3
LAMA4-219ENST00000522006 TICAM2Q86XR7 235 aa13.2□□□□□ -0.3
LAMA4-219ENST00000522006 TMC6Q7Z403 805 aa13.2□□□□□ -0.3
LAMA4-219ENST00000522006 PAFAH1B1P43034 410 aa13.2□□□□□ -0.3
LAMA4-219ENST00000522006 RARSP54136 660 aaKnown RBP13.2□□□□□ -0.3
LAMA4-219ENST00000522006 TDRD12Q587J7 1177 aaKnown RBP13.2□□□□□ -0.3
LAMA4-219ENST00000522006 LIMCH1Q9UPQ0 1083 aa13.2□□□□□ -0.3
LAMA4-219ENST00000522006 CAVIN4Q5BKX8 364 aa13.2□□□□□ -0.3
LAMA4-219ENST00000522006 THEMISQ8N1K5 641 aaPredicted RBP13.2□□□□□ -0.3
LAMA4-219ENST00000522006 FSIP1Q8NA03 581 aa13.2□□□□□ -0.3
LAMA4-219ENST00000522006 STARD3NLO95772 234 aa13.19□□□□□ -0.3
LAMA4-219ENST00000522006 UBE4AQ14139 1066 aa13.19□□□□□ -0.3
LAMA4-219ENST00000522006 SMC1AQ14683 1233 aaKnown RBP13.19□□□□□ -0.3
LAMA4-219ENST00000522006 STX1AQ16623 288 aa13.19□□□□□ -0.3
LAMA4-219ENST00000522006 TBC1D2Q9BYX2 928 aa13.19□□□□□ -0.3
LAMA4-219ENST00000522006 DAPK1P53355 1430 aa13.19□□□□□ -0.3
LAMA4-219ENST00000522006 NEMFO60524 1076 aa13.19□□□□□ -0.3
LAMA4-219ENST00000522006 GJB2P29033 226 aa13.19□□□□□ -0.3
LAMA4-219ENST00000522006 TMEM266Q2M3C6 531 aa13.19□□□□□ -0.3
LAMA4-219ENST00000522006 CCDC82Q8N4S0 544 aa13.19□□□□□ -0.3
LAMA4-219ENST00000522006 CTCFLQ8NI51 663 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-219ENST00000522006 LARP6Q9BRS8 491 aaKnown RBP13.19□□□□□ -0.3
LAMA4-219ENST00000522006 POTEB2H3BUK9 544 aa13.19□□□□□ -0.3
LAMA4-219ENST00000522006 CCDC8Q9H0W5 538 aaPredicted RBP13.19□□□□□ -0.3
LAMA4-219ENST00000522006 EFCAB5A4FU69 1503 aa13.19□□□□□ -0.3
LAMA4-219ENST00000522006 GOLGA8AA7E2F4 631 aa13.19□□□□□ -0.3
LAMA4-219ENST00000522006 GOLGA8BA8MQT2 603 aa13.19□□□□□ -0.3
LAMA4-219ENST00000522006 ZNF213O14771 459 aa13.19□□□□□ -0.3
LAMA4-219ENST00000522006 CCT2P78371 535 aaKnown RBP13.19□□□□□ -0.3
LAMA4-219ENST00000522006 SSH1Q8WYL5 1049 aa13.19□□□□□ -0.3
LAMA4-219ENST00000522006 CALCOCO1Q9P1Z2 691 aa13.19□□□□□ -0.3
LAMA4-219ENST00000522006 ADCY5O95622 1261 aa13.18□□□□□ -0.3
LAMA4-219ENST00000522006 GSDMDP57764 484 aa13.18□□□□□ -0.3
LAMA4-219ENST00000522006 LARP1Q6PKG0 1096 aaKnown RBP13.18□□□□□ -0.3
LAMA4-219ENST00000522006 ALS2CR12Q96Q35 445 aa13.18□□□□□ -0.3
LAMA4-219ENST00000522006 RANBP6O60518 1105 aaKnown RBP13.18□□□□□ -0.3
LAMA4-219ENST00000522006 PPP4R3BQ5MIZ7 849 aa13.18□□□□□ -0.3
LAMA4-219ENST00000522006 PPP4R3AQ6IN85 833 aa13.18□□□□□ -0.3
LAMA4-219ENST00000522006 AEBP2Q6ZN18 517 aaPredicted RBP13.18□□□□□ -0.3
LAMA4-219ENST00000522006 DDX19AQ9NUU7 478 aaKnown RBP13.18□□□□□ -0.3
LAMA4-219ENST00000522006 STAMBPO95630 424 aa13.18□□□□□ -0.3
LAMA4-219ENST00000522006 CRACR2BQ8N4Y2 399 aaPredicted RBP13.18□□□□□ -0.3
LAMA4-219ENST00000522006 PRDM11Q9NQV5 511 aa13.18□□□□□ -0.3
LAMA4-219ENST00000522006 DNAI2Q9GZS0 605 aa13.18□□□□□ -0.3
LAMA4-219ENST00000522006 TMOD2Q9NZR1 351 aa13.18□□□□□ -0.3
LAMA4-219ENST00000522006 NLRP5P59047 1200 aa13.18□□□□□ -0.3
LAMA4-219ENST00000522006 TRERF1Q96PN7 1200 aa13.18□□□□□ -0.3
LAMA4-219ENST00000522006 RPGRIP1LQ68CZ1 1315 aa13.18□□□□□ -0.3
LAMA4-219ENST00000522006 DCAF8L1A6NGE4 600 aa13.17□□□□□ -0.3
LAMA4-219ENST00000522006 GTF2F1P35269 517 aaKnown RBP eCLIP13.17□□□□□ -0.3
LAMA4-219ENST00000522006 CTR9Q6PD62 1173 aa13.17□□□□□ -0.3
LAMA4-219ENST00000522006 RAB34Q9BZG1 259 aa13.17□□□□□ -0.3
LAMA4-219ENST00000522006 PRG4Q92954 1404 aaPredicted RBP13.17□□□□□ -0.3
LAMA4-219ENST00000522006 BIN1O00499 593 aa13.17□□□□□ -0.3
LAMA4-219ENST00000522006 GDPD2Q9HCC8 539 aa13.17□□□□□ -0.3
LAMA4-219ENST00000522006 NF2P35240 595 aa13.17□□□□□ -0.3
LAMA4-219ENST00000522006 SCLT1Q96NL6 688 aa13.17□□□□□ -0.3
LAMA4-219ENST00000522006 SF3B2Q13435 895 aaKnown RBP13.17□□□□□ -0.3
LAMA4-219ENST00000522006 MTIF2P46199 727 aaKnown RBP13.17□□□□□ -0.3
LAMA4-219ENST00000522006 MAP3K12Q12852 859 aa13.17□□□□□ -0.3
LAMA4-219ENST00000522006 SNW1Q13573 536 aaKnown RBP13.17□□□□□ -0.3
LAMA4-219ENST00000522006 CCDC96Q2M329 555 aa13.17□□□□□ -0.3
LAMA4-219ENST00000522006 DZIP1Q86YF9 867 aaKnown RBP13.17□□□□□ -0.3
LAMA4-219ENST00000522006 SMARCC1Q92922 1105 aaPredicted RBP13.17□□□□□ -0.3
LAMA4-219ENST00000522006 MACROD2A1Z1Q3 448 aa13.16□□□□□ -0.3
LAMA4-219ENST00000522006 SLC52A1Q9NWF4 448 aa13.16□□□□□ -0.3
LAMA4-219ENST00000522006 GRIN2BQ13224 1484 aa13.16□□□□□ -0.3
LAMA4-219ENST00000522006 F6X3S4 739 aa13.16□□□□□ -0.3
LAMA4-219ENST00000522006 HLTFQ14527 1009 aaKnown RBP eCLIP13.16□□□□□ -0.3
LAMA4-219ENST00000522006 NUDT16Q96DE0 195 aaKnown RBP13.16□□□□□ -0.3
LAMA4-219ENST00000522006 RBM27Q9P2N5 1060 aaKnown RBP13.16□□□□□ -0.3
LAMA4-219ENST00000522006 CCDC150Q8NCX0 1101 aa13.16□□□□□ -0.3
LAMA4-219ENST00000522006 NAA15Q9BXJ9 866 aaKnown RBP13.16□□□□□ -0.3
LAMA4-219ENST00000522006 CCDC194A0A1B0GVG4 234 aa13.16□□□□□ -0.3
LAMA4-219ENST00000522006 IFIT3O14879 490 aaKnown RBP13.16□□□□□ -0.3
LAMA4-219ENST00000522006 TIAM1Q13009 1591 aa13.16□□□□□ -0.3
LAMA4-219ENST00000522006 HOOK3Q86VS8 718 aa13.16□□□□□ -0.3
LAMA4-219ENST00000522006 IQCA1Q86XH1 822 aa13.16□□□□□ -0.3
LAMA4-219ENST00000522006 CUL5Q93034 780 aa13.16□□□□□ -0.3
LAMA4-219ENST00000522006 FAM107BQ9H098 131 aa13.16□□□□□ -0.3
LAMA4-219ENST00000522006 ZNF444Q8N0Y2 327 aaPredicted RBP13.15□□□□□ -0.3
LAMA4-219ENST00000522006 SLC5A1P13866 664 aa13.15□□□□□ -0.3
LAMA4-219ENST00000522006 CEP63Q96MT8 703 aa13.15□□□□□ -0.3
LAMA4-219ENST00000522006 TMCO5BA8MYB1 307 aa13.15□□□□□ -0.3
LAMA4-219ENST00000522006 ZC3H6P61129 1189 aaKnown RBP13.15□□□□□ -0.3
LAMA4-219ENST00000522006 CEP135Q66GS9 1140 aa13.15□□□□□ -0.3
LAMA4-219ENST00000522006 ZNF652Q9Y2D9 606 aa13.15□□□□□ -0.3
LAMA4-219ENST00000522006 ABCC11Q96J66 1382 aa13.15□□□□□ -0.3
LAMA4-219ENST00000522006 STX6O43752 255 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms