RNA–Protein interactions for RNA: ENST00000521404.5

MEG3-217, Transcript of maternally expressed 3, humanhuman

TSL 1 (best)

Gene MEG3, Length 1,426 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-217ENST00000521404 USP42Q9H9J4 1324 aaKnown RBP20.9■□□□□ 0.94
MEG3-217ENST00000521404 VIRMAQ69YN4 1812 aaKnown RBP20.9■□□□□ 0.94
MEG3-217ENST00000521404 STARD3NLO95772 234 aa20.9■□□□□ 0.94
MEG3-217ENST00000521404 SOS1Q07889 1333 aaPredicted RBP20.9■□□□□ 0.94
MEG3-217ENST00000521404 RRP7AQ9Y3A4 280 aaKnown RBP20.88■□□□□ 0.93
MEG3-217ENST00000521404 PARP3Q9Y6F1 533 aa20.88■□□□□ 0.93
MEG3-217ENST00000521404 UBR2Q8IWV8 1755 aa20.88■□□□□ 0.93
MEG3-217ENST00000521404 HEG1Q9ULI3 1381 aa20.87■□□□□ 0.93
MEG3-217ENST00000521404 YBX3P16989 372 aaKnown RBP eCLIP20.87■□□□□ 0.93
MEG3-217ENST00000521404 TGFB2P61812 414 aa20.87■□□□□ 0.93
MEG3-217ENST00000521404 NFE2L2Q16236 605 aa20.87■□□□□ 0.93
MEG3-217ENST00000521404 ZNF496Q96IT1 587 aaPredicted RBP20.87■□□□□ 0.93
MEG3-217ENST00000521404 SENP3-EIF4A1A0A087X0R7 540 aa20.87■□□□□ 0.93
MEG3-217ENST00000521404 BTBD11A6QL63 1104 aa20.87■□□□□ 0.93
MEG3-217ENST00000521404 ZPR1O75312 459 aa20.87■□□□□ 0.93
MEG3-217ENST00000521404 RIPK4P57078 832 aa20.87■□□□□ 0.93
MEG3-217ENST00000521404 FMNL2Q96PY5 1086 aa20.87■□□□□ 0.93
MEG3-217ENST00000521404 C4AP0C0L4 1744 aa20.86■□□□□ 0.93
MEG3-217ENST00000521404 SIPA1L3O60292 1781 aaPredicted RBP20.86■□□□□ 0.93
MEG3-217ENST00000521404 CHD4Q14839 1912 aa20.85■□□□□ 0.93
MEG3-217ENST00000521404 TMPOP42166 694 aaKnown RBP20.85■□□□□ 0.93
MEG3-217ENST00000521404 SRP68Q9UHB9 627 aaKnown RBP20.85■□□□□ 0.93
MEG3-217ENST00000521404 NARFQ9UHQ1 456 aa20.85■□□□□ 0.93
MEG3-217ENST00000521404 ZBTB1Q9Y2K1 713 aa20.85■□□□□ 0.93
MEG3-217ENST00000521404 COL15A1P39059 1388 aa20.84■□□□□ 0.93
MEG3-217ENST00000521404 APAF1O14727 1248 aa20.84■□□□□ 0.93
MEG3-217ENST00000521404 FKBP8Q14318 412 aa20.84■□□□□ 0.93
MEG3-217ENST00000521404 C10orf71Q711Q0 1435 aa20.84■□□□□ 0.93
MEG3-217ENST00000521404 DLG5Q8TDM6 1919 aa20.83■□□□□ 0.93
MEG3-217ENST00000521404 A0A087WZG4 1122 aa20.83■□□□□ 0.93
MEG3-217ENST00000521404 TM4SF1P30408 202 aa20.82■□□□□ 0.92
MEG3-217ENST00000521404 DCTN1Q14203 1278 aa20.82■□□□□ 0.92
MEG3-217ENST00000521404 MCM10Q7L590 875 aa20.82■□□□□ 0.92
MEG3-217ENST00000521404 ZNF784Q8NCA9 323 aaPredicted RBP20.82■□□□□ 0.92
MEG3-217ENST00000521404 EIF5P55010 431 aaKnown RBP20.81■□□□□ 0.92
MEG3-217ENST00000521404 USPL1Q5W0Q7 1092 aa20.81■□□□□ 0.92
MEG3-217ENST00000521404 SALL2Q9Y467 1007 aaPredicted RBP20.81■□□□□ 0.92
MEG3-217ENST00000521404 KIF13BQ9NQT8 1826 aa20.81■□□□□ 0.92
MEG3-217ENST00000521404 CANXP27824 592 aaKnown RBP20.8■□□□□ 0.92
MEG3-217ENST00000521404 LMOD3Q0VAK6 560 aa20.8■□□□□ 0.92
MEG3-217ENST00000521404 PXDNLA1KZ92 1463 aa20.8■□□□□ 0.92
MEG3-217ENST00000521404 IL6STP40189 918 aaPredicted RBP20.79■□□□□ 0.92
MEG3-217ENST00000521404 TAF7Q15545 349 aaPredicted RBP20.79■□□□□ 0.92
MEG3-217ENST00000521404 DDR1Q08345 913 aa20.78■□□□□ 0.92
MEG3-217ENST00000521404 POLRMTO00411 1230 aaKnown RBP20.78■□□□□ 0.92
MEG3-217ENST00000521404 KCNQ3O43525 872 aa20.78■□□□□ 0.92
MEG3-217ENST00000521404 SNRPA1P09661 255 aaKnown RBP20.78■□□□□ 0.92
MEG3-217ENST00000521404 NPM2Q86SE8 214 aaKnown RBP20.78■□□□□ 0.92
MEG3-217ENST00000521404 A0A0G2JLW4 131 aa20.76■□□□□ 0.91
MEG3-217ENST00000521404 NFIXQ14938 502 aa20.76■□□□□ 0.91
MEG3-217ENST00000521404 THUMPD2Q9BTF0 503 aaKnown RBP20.76■□□□□ 0.91
MEG3-217ENST00000521404 BCL2L12Q9HB09 334 aa20.76■□□□□ 0.91
MEG3-217ENST00000521404 DPEP1P16444 411 aa20.74■□□□□ 0.91
MEG3-217ENST00000521404 LAS1LQ9Y4W2 734 aaKnown RBP20.74■□□□□ 0.91
MEG3-217ENST00000521404 KIAA1551Q9HCM1 1747 aa20.73■□□□□ 0.91
MEG3-217ENST00000521404 A1BGP04217 495 aa20.73■□□□□ 0.91
MEG3-217ENST00000521404 TRIM35Q9UPQ4 493 aa20.73■□□□□ 0.91
MEG3-217ENST00000521404 USP16Q9Y5T5 823 aa20.73■□□□□ 0.91
MEG3-217ENST00000521404 PIM2Q9P1W9 311 aa20.72■□□□□ 0.91
MEG3-217ENST00000521404 SERPINB2P05120 415 aa20.71■□□□□ 0.91
MEG3-217ENST00000521404 KCNA3P22001 575 aa20.71■□□□□ 0.91
MEG3-217ENST00000521404 BCS1LQ9Y276 419 aa20.71■□□□□ 0.91
MEG3-217ENST00000521404 RGL2O15211 777 aa20.7■□□□□ 0.9
MEG3-217ENST00000521404 MIS18AQ9NYP9 233 aa20.7■□□□□ 0.9
MEG3-217ENST00000521404 ZNF330Q9Y3S2 320 aaPredicted RBP20.7■□□□□ 0.9
MEG3-217ENST00000521404 WWC3Q9ULE0 1092 aa20.7■□□□□ 0.9
MEG3-217ENST00000521404 TBC1D2BQ9UPU7 963 aa20.7■□□□□ 0.9
MEG3-217ENST00000521404 UTRNP46939 3433 aa20.68■□□□□ 0.9
MEG3-217ENST00000521404 N4BP2Q86UW6 1770 aaPredicted RBP20.68■□□□□ 0.9
MEG3-217ENST00000521404 NRXN2Q9P2S2 1712 aa20.68■□□□□ 0.9
MEG3-217ENST00000521404 PRAMEF22A3QJZ6 481 aa20.68■□□□□ 0.9
MEG3-217ENST00000521404 CAMTA2O94983 1202 aa20.68■□□□□ 0.9
MEG3-217ENST00000521404 CALD1Q05682 793 aaKnown RBP20.68■□□□□ 0.9
MEG3-217ENST00000521404 DALRD3Q5D0E6 543 aaKnown RBP20.68■□□□□ 0.9
MEG3-217ENST00000521404 CLEC4GQ6UXB4 293 aa20.68■□□□□ 0.9
MEG3-217ENST00000521404 DZIP3Q86Y13 1208 aaKnown RBP20.68■□□□□ 0.9
MEG3-217ENST00000521404 BABAM1Q9NWV8 329 aa20.68■□□□□ 0.9
MEG3-217ENST00000521404 TBC1D9BQ66K14 1250 aa20.67■□□□□ 0.9
MEG3-217ENST00000521404 PDZRN3Q9UPQ7 1066 aa20.67■□□□□ 0.9
MEG3-217ENST00000521404 ADCY9O60503 1353 aa20.67■□□□□ 0.9
MEG3-217ENST00000521404 CARMIL3Q8ND23 1372 aa20.67■□□□□ 0.9
MEG3-217ENST00000521404 SCN7AQ01118 1682 aa20.66■□□□□ 0.9
MEG3-217ENST00000521404 GIGYF1O75420 1035 aaPredicted RBP20.66■□□□□ 0.9
MEG3-217ENST00000521404 EIF4A1P60842 406 aaKnown RBP20.66■□□□□ 0.9
MEG3-217ENST00000521404 WWC1Q8IX03 1113 aa20.66■□□□□ 0.9
MEG3-217ENST00000521404 TSPYL4Q9UJ04 414 aa20.66■□□□□ 0.9
MEG3-217ENST00000521404 ZNF652Q9Y2D9 606 aa20.66■□□□□ 0.9
MEG3-217ENST00000521404 CCDC27Q2M243 656 aa20.65■□□□□ 0.9
MEG3-217ENST00000521404 BICDL1Q6ZP65 573 aa20.65■□□□□ 0.9
MEG3-217ENST00000521404 NGEFQ8N5V2 710 aa20.65■□□□□ 0.9
MEG3-217ENST00000521404 SETDB2Q96T68 719 aa20.65■□□□□ 0.9
MEG3-217ENST00000521404 BRCA1P38398 1863 aaKnown RBP20.64■□□□□ 0.9
MEG3-217ENST00000521404 NBPF26B4DH59 902 aa20.64■□□□□ 0.89
MEG3-217ENST00000521404 CHRNA5P30532 468 aa20.64■□□□□ 0.89
MEG3-217ENST00000521404 HNRNPUQ00839 825 aaKnown RBP eCLIP20.64■□□□□ 0.897e-8■■□□□ 13.8
MEG3-217ENST00000521404 NBPF10Q6P3W6 841 aaKnown RBP20.64■□□□□ 0.89
MEG3-217ENST00000521404 ARHGAP27Q6ZUM4 889 aa20.64■□□□□ 0.89
MEG3-217ENST00000521404 NBPF15Q8N660 670 aa20.64■□□□□ 0.89
MEG3-217ENST00000521404 ATP10DQ9P241 1426 aa20.64■□□□□ 0.89
MEG3-217ENST00000521404 BRIP1Q9BX63 1249 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms