RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 PRAMEF22A3QJZ6 481 aa22.54■■□□□ 1.2
TRAM1-203ENST00000520700 CRKLP46109 303 aaKnown RBP22.54■■□□□ 1.2
TRAM1-203ENST00000520700 SLC15A2Q16348 729 aa22.54■■□□□ 1.2
TRAM1-203ENST00000520700 KRT24Q2M2I5 525 aa22.54■■□□□ 1.2
TRAM1-203ENST00000520700 INTS5Q6P9B9 1019 aaKnown RBP22.54■■□□□ 1.2
TRAM1-203ENST00000520700 CCDC87Q9NVE4 849 aa22.53■■□□□ 1.2
TRAM1-203ENST00000520700 STK32BQ9NY57 414 aa22.53■■□□□ 1.2
TRAM1-203ENST00000520700 ERBB4Q15303 1308 aa22.53■■□□□ 1.2
TRAM1-203ENST00000520700 COL5A3P25940 1745 aaPredicted RBP22.52■■□□□ 1.2
TRAM1-203ENST00000520700 RPS6KA4O75676 772 aa22.52■■□□□ 1.2
TRAM1-203ENST00000520700 ANO8Q9HCE9 1232 aaPredicted RBP22.52■■□□□ 1.2
TRAM1-203ENST00000520700 C4BP0C0L5 1744 aa22.51■■□□□ 1.19
TRAM1-203ENST00000520700 EXOSC9Q06265 439 aaKnown RBP22.51■■□□□ 1.19
TRAM1-203ENST00000520700 ZNF827Q17R98 1081 aa22.51■■□□□ 1.19
TRAM1-203ENST00000520700 TSPYL6Q8N831 410 aa22.51■■□□□ 1.19
TRAM1-203ENST00000520700 TWISTNBQ3B726 338 aaPredicted RBP22.5■■□□□ 1.19
TRAM1-203ENST00000520700 FLAD1Q8NFF5 587 aa22.5■■□□□ 1.19
TRAM1-203ENST00000520700 AK7Q96M32 723 aa22.5■■□□□ 1.19
TRAM1-203ENST00000520700 VAMP4O75379 141 aa22.49■■□□□ 1.19
TRAM1-203ENST00000520700 ADRA2BP18089 450 aa22.49■■□□□ 1.19
TRAM1-203ENST00000520700 SSFA2P28290 1259 aa22.49■■□□□ 1.19
TRAM1-203ENST00000520700 A1BGP04217 495 aa22.48■■□□□ 1.19
TRAM1-203ENST00000520700 CT47B1P0C2W7 299 aaPredicted RBP22.48■■□□□ 1.19
TRAM1-203ENST00000520700 IL6STP40189 918 aaPredicted RBP22.48■■□□□ 1.19
TRAM1-203ENST00000520700 EIF5P55010 431 aaKnown RBP22.48■■□□□ 1.19
TRAM1-203ENST00000520700 TFCP2L1Q9NZI6 479 aa22.48■■□□□ 1.19
TRAM1-203ENST00000520700 ZBTB1Q9Y2K1 713 aa22.48■■□□□ 1.19
TRAM1-203ENST00000520700 RTCBQ9Y3I0 505 aaKnown RBP22.48■■□□□ 1.19
TRAM1-203ENST00000520700 MYH14Q7Z406 1995 aaKnown RBP22.48■■□□□ 1.19
TRAM1-203ENST00000520700 ELL2O00472 640 aaPredicted RBP22.47■■□□□ 1.19
TRAM1-203ENST00000520700 HDGFL1Q5TGJ6 251 aa22.47■■□□□ 1.19
TRAM1-203ENST00000520700 ZNF428Q96B54 188 aa22.47■■□□□ 1.19
TRAM1-203ENST00000520700 NBPF26B4DH59 902 aa22.46■■□□□ 1.19
TRAM1-203ENST00000520700 GNPATO15228 680 aa22.46■■□□□ 1.19
TRAM1-203ENST00000520700 EIF2S2P20042 333 aaKnown RBP22.46■■□□□ 1.19
TRAM1-203ENST00000520700 PDIA6Q15084 440 aa22.46■■□□□ 1.19
TRAM1-203ENST00000520700 NBPF10Q6P3W6 841 aaKnown RBP22.46■■□□□ 1.19
TRAM1-203ENST00000520700 NBPF15Q8N660 670 aa22.46■■□□□ 1.19
TRAM1-203ENST00000520700 LAMB4A4D0S4 1761 aa22.45■■□□□ 1.19
TRAM1-203ENST00000520700 CCDC30Q5VVM6 783 aa22.45■■□□□ 1.18
TRAM1-203ENST00000520700 DDX21Q9NR30 783 aaKnown RBP eCLIP22.45■■□□□ 1.18
TRAM1-203ENST00000520700 DBF4Q9UBU7 674 aaPredicted RBP22.45■■□□□ 1.18
TRAM1-203ENST00000520700 TRAPPC3LQ5T215 181 aa22.44■■□□□ 1.18
TRAM1-203ENST00000520700 LRP10Q7Z4F1 713 aa22.44■■□□□ 1.18
TRAM1-203ENST00000520700 PNPLA7Q6ZV29 1317 aa22.43■■□□□ 1.18
TRAM1-203ENST00000520700 A0A087WZG4 1122 aa22.43■■□□□ 1.18
TRAM1-203ENST00000520700 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.43■■□□□ 1.18
TRAM1-203ENST00000520700 CANXP27824 592 aaKnown RBP22.43■■□□□ 1.18
TRAM1-203ENST00000520700 AMIGO3Q86WK7 504 aa22.43■■□□□ 1.18
TRAM1-203ENST00000520700 QSER1Q2KHR3 1735 aa22.42■■□□□ 1.18
TRAM1-203ENST00000520700 UBR3Q6ZT12 1888 aa22.41■■□□□ 1.18
TRAM1-203ENST00000520700 COL23A1Q86Y22 540 aaPredicted RBP22.41■■□□□ 1.18
TRAM1-203ENST00000520700 ARHGEF1Q92888 912 aaKnown RBP22.41■■□□□ 1.18
TRAM1-203ENST00000520700 HYPKQ9NX55 129 aa22.41■■□□□ 1.18
TRAM1-203ENST00000520700 RGL2O15211 777 aa22.4■■□□□ 1.18
TRAM1-203ENST00000520700 R3HDM1Q15032 1099 aaKnown RBP22.4■■□□□ 1.18
TRAM1-203ENST00000520700 SLC16A10Q8TF71 515 aa22.4■■□□□ 1.18
TRAM1-203ENST00000520700 CHPF2Q9P2E5 772 aa22.4■■□□□ 1.18
TRAM1-203ENST00000520700 YTHDC1Q96MU7 727 aaKnown RBP22.39■■□□□ 1.17
TRAM1-203ENST00000520700 COL15A1P39059 1388 aa22.38■■□□□ 1.17
TRAM1-203ENST00000520700 PROSER3Q2NL68 480 aa22.38■■□□□ 1.17
TRAM1-203ENST00000520700 NPM2Q86SE8 214 aaKnown RBP22.38■■□□□ 1.17
TRAM1-203ENST00000520700 NECTIN2Q92692 538 aa22.38■■□□□ 1.17
TRAM1-203ENST00000520700 STK31Q9BXU1 1019 aa22.38■■□□□ 1.17
TRAM1-203ENST00000520700 NARFQ9UHQ1 456 aa22.38■■□□□ 1.17
TRAM1-203ENST00000520700 RFC4P35249 363 aa22.37■■□□□ 1.17
TRAM1-203ENST00000520700 ALDH1L2Q3SY69 923 aa22.37■■□□□ 1.17
TRAM1-203ENST00000520700 PHF14O94880 888 aa22.36■■□□□ 1.17
TRAM1-203ENST00000520700 MYL6BP14649 208 aa22.36■■□□□ 1.17
TRAM1-203ENST00000520700 PIP4K2AP48426 406 aaPredicted RBP22.36■■□□□ 1.17
TRAM1-203ENST00000520700 SMIM5Q71RC9 77 aa22.36■■□□□ 1.17
TRAM1-203ENST00000520700 SLC4A2P04920 1241 aa22.35■■□□□ 1.17
TRAM1-203ENST00000520700 BRPF1P55201 1214 aaPredicted RBP22.35■■□□□ 1.17
TRAM1-203ENST00000520700 USP42Q9H9J4 1324 aaKnown RBP22.34■■□□□ 1.17
TRAM1-203ENST00000520700 TUBGCP6Q96RT7 1819 aa22.34■■□□□ 1.17
TRAM1-203ENST00000520700 ERVV-1B6SEH8 477 aa22.34■■□□□ 1.17
TRAM1-203ENST00000520700 DZIP3Q86Y13 1208 aaKnown RBP22.34■■□□□ 1.17
TRAM1-203ENST00000520700 ZPR1O75312 459 aa22.33■■□□□ 1.17
TRAM1-203ENST00000520700 CAMTA2O94983 1202 aa22.33■■□□□ 1.17
TRAM1-203ENST00000520700 ANXA1P04083 346 aa22.33■■□□□ 1.17
TRAM1-203ENST00000520700 CLEC4GQ6UXB4 293 aa22.33■■□□□ 1.17
TRAM1-203ENST00000520700 COPS6Q7L5N1 327 aa22.33■■□□□ 1.17
TRAM1-203ENST00000520700 PSDA5PKW4 1024 aaPredicted RBP22.32■■□□□ 1.16
TRAM1-203ENST00000520700 RARSP54136 660 aaKnown RBP22.32■■□□□ 1.16
TRAM1-203ENST00000520700 XAGE3Q8WTP9 111 aa22.32■■□□□ 1.16
TRAM1-203ENST00000520700 SSH1Q8WYL5 1049 aa22.32■■□□□ 1.16
TRAM1-203ENST00000520700 PDGFDQ9GZP0 370 aaPredicted RBP22.32■■□□□ 1.16
TRAM1-203ENST00000520700 TBC1D2BQ9UPU7 963 aa22.32■■□□□ 1.16
TRAM1-203ENST00000520700 CACNA1FO60840 1977 aa22.32■■□□□ 1.16
TRAM1-203ENST00000520700 GYS1P13807 737 aa22.31■■□□□ 1.16
TRAM1-203ENST00000520700 TTLL7Q6ZT98 887 aa22.31■■□□□ 1.16
TRAM1-203ENST00000520700 NLGN1Q8N2Q7 840 aa22.31■■□□□ 1.16
TRAM1-203ENST00000520700 MRPL50Q8N5N7 158 aaKnown RBP22.31■■□□□ 1.16
TRAM1-203ENST00000520700 ZNF330Q9Y3S2 320 aaPredicted RBP22.31■■□□□ 1.16
TRAM1-203ENST00000520700 MAP3K15Q6ZN16 1313 aa22.31■■□□□ 1.16
TRAM1-203ENST00000520700 USPL1Q5W0Q7 1092 aa22.3■■□□□ 1.16
TRAM1-203ENST00000520700 KIF6Q6ZMV9 814 aa22.3■■□□□ 1.16
TRAM1-203ENST00000520700 PHAXQ9H814 394 aaKnown RBP22.3■■□□□ 1.16
TRAM1-203ENST00000520700 BCL2L12Q9HB09 334 aa22.3■■□□□ 1.16
TRAM1-203ENST00000520700 CASZ1Q86V15 1759 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms