RNA–Protein interactions for RNA: ENST00000520630.1

CSMD1-209, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 312 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-209ENST00000520630 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.25□□□□□ -0.61
CSMD1-209ENST00000520630 SPG7Q9UQ90 795 aa11.25□□□□□ -0.61
CSMD1-209ENST00000520630 USP42Q9H9J4 1324 aaKnown RBP11.25□□□□□ -0.61
CSMD1-209ENST00000520630 IFNL2Q8IZJ0 200 aa11.24□□□□□ -0.61
CSMD1-209ENST00000520630 RBM42Q9BTD8 480 aaKnown RBP11.24□□□□□ -0.61
CSMD1-209ENST00000520630 PRDM10Q9NQV6 1147 aa11.24□□□□□ -0.61
CSMD1-209ENST00000520630 ST20-MTHFSA0A0A6YYL1 179 aa11.23□□□□□ -0.61
CSMD1-209ENST00000520630 LMNB1P20700 586 aa11.23□□□□□ -0.61
CSMD1-209ENST00000520630 FAM161AQ3B820 660 aa11.23□□□□□ -0.61
CSMD1-209ENST00000520630 CARD14Q9BXL6 1004 aa11.23□□□□□ -0.61
CSMD1-209ENST00000520630 CREBZFQ9NS37 354 aa11.23□□□□□ -0.61
CSMD1-209ENST00000520630 CNTNAP1P78357 1384 aa11.23□□□□□ -0.61
CSMD1-209ENST00000520630 CRKLP46109 303 aaKnown RBP11.22□□□□□ -0.61
CSMD1-209ENST00000520630 INTS5Q6P9B9 1019 aaKnown RBP11.22□□□□□ -0.61
CSMD1-209ENST00000520630 CARMIL3Q8ND23 1372 aa11.22□□□□□ -0.61
CSMD1-209ENST00000520630 PASKQ96RG2 1323 aa11.22□□□□□ -0.61
CSMD1-209ENST00000520630 SCN7AQ01118 1682 aa11.21□□□□□ -0.61
CSMD1-209ENST00000520630 WASHC2AQ641Q2 1341 aa11.21□□□□□ -0.61
CSMD1-209ENST00000520630 CCER1Q8TC90 406 aaPredicted RBP11.21□□□□□ -0.61
CSMD1-209ENST00000520630 ERVV-2B6SEH9 535 aa11.2□□□□□ -0.62
CSMD1-209ENST00000520630 VEGFBP49765 207 aa11.2□□□□□ -0.62
CSMD1-209ENST00000520630 BCL2L12Q9HB09 334 aa11.2□□□□□ -0.62
CSMD1-209ENST00000520630 WBP1LQ9NX94 342 aa11.2□□□□□ -0.62
CSMD1-209ENST00000520630 PCDH10Q9P2E7 1040 aa11.2□□□□□ -0.62
CSMD1-209ENST00000520630 SIPA1L3O60292 1781 aaPredicted RBP11.2□□□□□ -0.62
CSMD1-209ENST00000520630 BCORQ6W2J9 1755 aa11.2□□□□□ -0.62
CSMD1-209ENST00000520630 POLR2AP24928 1970 aaKnown RBP11.19□□□□□ -0.62
CSMD1-209ENST00000520630 LTBP1Q14766 1721 aa11.19□□□□□ -0.62
CSMD1-209ENST00000520630 LBX1P52954 281 aa11.19□□□□□ -0.62
CSMD1-209ENST00000520630 USPL1Q5W0Q7 1092 aa11.19□□□□□ -0.62
CSMD1-209ENST00000520630 ABHD8Q96I13 439 aa11.19□□□□□ -0.62
CSMD1-209ENST00000520630 PTCD1O75127 700 aaKnown RBP11.18□□□□□ -0.62
CSMD1-209ENST00000520630 ITGBL1O95965 494 aaPredicted RBP11.18□□□□□ -0.62
CSMD1-209ENST00000520630 HSPA8P11142 646 aaKnown RBP11.18□□□□□ -0.62
CSMD1-209ENST00000520630 RGS19P49795 217 aa11.18□□□□□ -0.62
CSMD1-209ENST00000520630 NFIXQ14938 502 aa11.18□□□□□ -0.62
CSMD1-209ENST00000520630 CHADLQ6NUI6 762 aa11.18□□□□□ -0.62
CSMD1-209ENST00000520630 SOS1Q07889 1333 aaPredicted RBP11.17□□□□□ -0.62
CSMD1-209ENST00000520630 CTCFP49711 727 aaPredicted RBP11.17□□□□□ -0.62
CSMD1-209ENST00000520630 EIF4A2Q14240 407 aaKnown RBP11.17□□□□□ -0.62
CSMD1-209ENST00000520630 POLKQ9UBT6 870 aa11.17□□□□□ -0.62
CSMD1-209ENST00000520630 CLSPNQ9HAW4 1339 aa11.16□□□□□ -0.62
CSMD1-209ENST00000520630 PPM1GO15355 546 aaPredicted RBP11.16□□□□□ -0.62
CSMD1-209ENST00000520630 DDNO94850 711 aaPredicted RBP11.16□□□□□ -0.62
CSMD1-209ENST00000520630 TTLL6Q8N841 843 aa11.16□□□□□ -0.62
CSMD1-209ENST00000520630 NFATC2IPQ8NCF5 419 aa11.15□□□□□ -0.62
CSMD1-209ENST00000520630 SERPINB2P05120 415 aa11.14□□□□□ -0.63
CSMD1-209ENST00000520630 C2CD5Q86YS7 1000 aa11.14□□□□□ -0.63
CSMD1-209ENST00000520630 DNAJC10Q8IXB1 793 aa11.14□□□□□ -0.63
CSMD1-209ENST00000520630 MRC1P22897 1456 aa11.13□□□□□ -0.63
CSMD1-209ENST00000520630 CYP19A1P11511 503 aaPredicted RBP11.13□□□□□ -0.63
CSMD1-209ENST00000520630 CABP4P57796 275 aa11.13□□□□□ -0.63
CSMD1-209ENST00000520630 ERFEQ4G0M1 354 aa11.13□□□□□ -0.63
CSMD1-209ENST00000520630 NARFQ9UHQ1 456 aa11.13□□□□□ -0.63
CSMD1-209ENST00000520630 COL15A1P39059 1388 aa11.13□□□□□ -0.63
CSMD1-209ENST00000520630 AKAP11Q9UKA4 1901 aa11.12□□□□□ -0.63
CSMD1-209ENST00000520630 C21orf2O43822 256 aa11.12□□□□□ -0.63
CSMD1-209ENST00000520630 DPY19L2Q6NUT2 758 aa11.12□□□□□ -0.63
CSMD1-209ENST00000520630 TAF1DQ9H5J8 278 aaPredicted RBP11.12□□□□□ -0.63
CSMD1-209ENST00000520630 ZNF219Q9P2Y4 722 aaPredicted RBP11.12□□□□□ -0.63
CSMD1-209ENST00000520630 LTBP3Q9NS15 1303 aa11.11□□□□□ -0.63
CSMD1-209ENST00000520630 RASSF10A6NK89 507 aa11.11□□□□□ -0.63
CSMD1-209ENST00000520630 TMEM88BA6NKF7 163 aa11.11□□□□□ -0.63
CSMD1-209ENST00000520630 ZPR1O75312 459 aa11.11□□□□□ -0.63
CSMD1-209ENST00000520630 ZEB1P37275 1124 aaPredicted RBP11.11□□□□□ -0.63
CSMD1-209ENST00000520630 MLLT1Q03111 559 aaPredicted RBP11.11□□□□□ -0.63
CSMD1-209ENST00000520630 ZNF530Q6P9A1 599 aaPredicted RBP11.11□□□□□ -0.63
CSMD1-209ENST00000520630 AEBP1Q8IUX7 1158 aa11.11□□□□□ -0.63
CSMD1-209ENST00000520630 CCDC24Q8N4L8 307 aa11.11□□□□□ -0.63
CSMD1-209ENST00000520630 L3MBTL3Q96JM7 780 aaPredicted RBP11.11□□□□□ -0.63
CSMD1-209ENST00000520630 ZBTB1Q9Y2K1 713 aa11.11□□□□□ -0.63
CSMD1-209ENST00000520630 COL4A5P29400 1685 aa11.11□□□□□ -0.63
CSMD1-209ENST00000520630 NUP98P52948 1817 aa11.1□□□□□ -0.63
CSMD1-209ENST00000520630 H0YIN7 160 aa11.1□□□□□ -0.63
CSMD1-209ENST00000520630 HSP90AB1P08238 724 aaKnown RBP11.1□□□□□ -0.63
CSMD1-209ENST00000520630 LDHDQ86WU2 507 aa11.1□□□□□ -0.63
CSMD1-209ENST00000520630 CCDC85CA6NKD9 419 aa11.09□□□□□ -0.63
CSMD1-209ENST00000520630 MTHFSP49914 203 aa11.09□□□□□ -0.63
CSMD1-209ENST00000520630 FMR1Q06787 632 aaKnown RBP eCLIP11.09□□□□□ -0.63
CSMD1-209ENST00000520630 PLEKHO1Q53GL0 409 aaPredicted RBP11.09□□□□□ -0.63
CSMD1-209ENST00000520630 AIDAQ96BJ3 306 aa11.09□□□□□ -0.63
CSMD1-209ENST00000520630 WDR33Q9C0J8 1336 aaKnown RBP11.09□□□□□ -0.63
CSMD1-209ENST00000520630 ZNF541Q9H0D2 1346 aa11.09□□□□□ -0.63
CSMD1-209ENST00000520630 SLC39A6Q13433 755 aa11.08□□□□□ -0.64
CSMD1-209ENST00000520630 DEFB115Q30KQ5 88 aa11.08□□□□□ -0.64
CSMD1-209ENST00000520630 TBC1D9BQ66K14 1250 aa11.08□□□□□ -0.64
CSMD1-209ENST00000520630 C7orf43Q8WVR3 580 aa11.08□□□□□ -0.64
CSMD1-209ENST00000520630 ZNF622Q969S3 477 aaKnown RBP eCLIP11.08□□□□□ -0.64
CSMD1-209ENST00000520630 LGR6Q9HBX8 967 aa11.08□□□□□ -0.64
CSMD1-209ENST00000520630 PRR5LQ6MZQ0 368 aa11.07□□□□□ -0.64
CSMD1-209ENST00000520630 SNED1Q8TER0 1413 aa11.07□□□□□ -0.64
CSMD1-209ENST00000520630 EIF5P55010 431 aaKnown RBP11.06□□□□□ -0.64
CSMD1-209ENST00000520630 MAP1SQ66K74 1059 aaPredicted RBP11.06□□□□□ -0.64
CSMD1-209ENST00000520630 BICDL1Q6ZP65 573 aa11.06□□□□□ -0.64
CSMD1-209ENST00000520630 BRIP1Q9BX63 1249 aa11.06□□□□□ -0.64
CSMD1-209ENST00000520630 TAOK3Q9H2K8 898 aa11.06□□□□□ -0.64
CSMD1-209ENST00000520630 TAF1P21675 1872 aa11.06□□□□□ -0.64
CSMD1-209ENST00000520630 SLC24A1O60721 1099 aa11.05□□□□□ -0.64
CSMD1-209ENST00000520630 TNNT2P45379 298 aaPredicted RBP11.05□□□□□ -0.64
CSMD1-209ENST00000520630 AMOTQ4VCS5 1084 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms