RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 MMP10P09238 476 aa19.89■□□□□ 0.77
FBXO28-204ENST00000519894 ZNF496Q96IT1 587 aaPredicted RBP19.89■□□□□ 0.77
FBXO28-204ENST00000519894 MCM10Q7L590 875 aa19.88■□□□□ 0.77
FBXO28-204ENST00000519894 PLEKHF1Q96S99 279 aa19.88■□□□□ 0.77
FBXO28-204ENST00000519894 SRP68Q9UHB9 627 aaKnown RBP19.88■□□□□ 0.77
FBXO28-204ENST00000519894 SOS1Q07889 1333 aaPredicted RBP19.87■□□□□ 0.77
FBXO28-204ENST00000519894 KCNQ3O43525 872 aa19.87■□□□□ 0.77
FBXO28-204ENST00000519894 DCTN1Q14203 1278 aa19.87■□□□□ 0.77
FBXO28-204ENST00000519894 PELP1Q8IZL8 1130 aaKnown RBP19.87■□□□□ 0.77
FBXO28-204ENST00000519894 RTF1Q92541 710 aaKnown RBP19.87■□□□□ 0.77
FBXO28-204ENST00000519894 ZBTB1Q9Y2K1 713 aa19.87■□□□□ 0.77
FBXO28-204ENST00000519894 HEG1Q9ULI3 1381 aa19.86■□□□□ 0.77
FBXO28-204ENST00000519894 USP42Q9H9J4 1324 aaKnown RBP19.86■□□□□ 0.77
FBXO28-204ENST00000519894 BTBD11A6QL63 1104 aa19.86■□□□□ 0.77
FBXO28-204ENST00000519894 HTATSF1O43719 755 aaKnown RBP19.86■□□□□ 0.77
FBXO28-204ENST00000519894 MYBBP1AQ9BQG0 1328 aaKnown RBP19.84■□□□□ 0.77
FBXO28-204ENST00000519894 YBX3P16989 372 aaKnown RBP eCLIP19.84■□□□□ 0.77
FBXO28-204ENST00000519894 ZEB1P37275 1124 aaPredicted RBP19.84■□□□□ 0.77
FBXO28-204ENST00000519894 FKBP8Q14318 412 aa19.84■□□□□ 0.77
FBXO28-204ENST00000519894 FMNL2Q96PY5 1086 aa19.84■□□□□ 0.77
FBXO28-204ENST00000519894 NEFMP07197 916 aa19.83■□□□□ 0.77
FBXO28-204ENST00000519894 POLA2Q14181 598 aa19.83■□□□□ 0.77
FBXO28-204ENST00000519894 TEX13AQ9BXU3 409 aaPredicted RBP19.83■□□□□ 0.77
FBXO28-204ENST00000519894 DLG5Q8TDM6 1919 aa19.82■□□□□ 0.76
FBXO28-204ENST00000519894 STARD3NLO95772 234 aa19.82■□□□□ 0.76
FBXO28-204ENST00000519894 CANXP27824 592 aaKnown RBP19.82■□□□□ 0.76
FBXO28-204ENST00000519894 USPL1Q5W0Q7 1092 aa19.82■□□□□ 0.76
FBXO28-204ENST00000519894 PNNQ9H307 717 aaKnown RBP19.82■□□□□ 0.76
FBXO28-204ENST00000519894 PARP3Q9Y6F1 533 aa19.82■□□□□ 0.76
FBXO28-204ENST00000519894 CHD4Q14839 1912 aa19.82■□□□□ 0.76
FBXO28-204ENST00000519894 COL15A1P39059 1388 aa19.82■□□□□ 0.76
FBXO28-204ENST00000519894 NFE2L2Q16236 605 aa19.81■□□□□ 0.76
FBXO28-204ENST00000519894 NARFQ9UHQ1 456 aa19.81■□□□□ 0.76
FBXO28-204ENST00000519894 ZPR1O75312 459 aa19.8■□□□□ 0.76
FBXO28-204ENST00000519894 TM4SF1P30408 202 aa19.8■□□□□ 0.76
FBXO28-204ENST00000519894 EIF5P55010 431 aaKnown RBP19.8■□□□□ 0.76
FBXO28-204ENST00000519894 KIF13BQ9NQT8 1826 aa19.8■□□□□ 0.76
FBXO28-204ENST00000519894 GRIN3BO60391 1043 aa19.79■□□□□ 0.76
FBXO28-204ENST00000519894 DDR1Q08345 913 aa19.79■□□□□ 0.76
FBXO28-204ENST00000519894 TAF7Q15545 349 aaPredicted RBP19.79■□□□□ 0.76
FBXO28-204ENST00000519894 BCL2L12Q9HB09 334 aa19.79■□□□□ 0.76
FBXO28-204ENST00000519894 USP16Q9Y5T5 823 aa19.79■□□□□ 0.76
FBXO28-204ENST00000519894 MAPK8IP3Q9UPT6 1336 aa19.78■□□□□ 0.76
FBXO28-204ENST00000519894 C10orf71Q711Q0 1435 aa19.78■□□□□ 0.76
FBXO28-204ENST00000519894 PRAMEF22A3QJZ6 481 aa19.78■□□□□ 0.76
FBXO28-204ENST00000519894 A1BGP04217 495 aa19.78■□□□□ 0.76
FBXO28-204ENST00000519894 PRKRIP1Q9H875 184 aaPredicted RBP19.78■□□□□ 0.76
FBXO28-204ENST00000519894 TGFB2P61812 414 aa19.77■□□□□ 0.76
FBXO28-204ENST00000519894 MIS18AQ9NYP9 233 aa19.77■□□□□ 0.76
FBXO28-204ENST00000519894 WWC3Q9ULE0 1092 aa19.77■□□□□ 0.76
FBXO28-204ENST00000519894 KIAA1551Q9HCM1 1747 aa19.76■□□□□ 0.75
FBXO28-204ENST00000519894 PXDNLA1KZ92 1463 aa19.76■□□□□ 0.75
FBXO28-204ENST00000519894 POLRMTO00411 1230 aaKnown RBP19.76■□□□□ 0.75
FBXO28-204ENST00000519894 A0A087WZG4 1122 aa19.75■□□□□ 0.75
FBXO28-204ENST00000519894 SNRPA1P09661 255 aaKnown RBP19.75■□□□□ 0.75
FBXO28-204ENST00000519894 IL6STP40189 918 aaPredicted RBP19.75■□□□□ 0.75
FBXO28-204ENST00000519894 NFIXQ14938 502 aa19.75■□□□□ 0.75
FBXO28-204ENST00000519894 THUMPD2Q9BTF0 503 aaKnown RBP19.75■□□□□ 0.75
FBXO28-204ENST00000519894 N4BP2Q86UW6 1770 aaPredicted RBP19.75■□□□□ 0.75
FBXO28-204ENST00000519894 A0A0G2JLW4 131 aa19.74■□□□□ 0.75
FBXO28-204ENST00000519894 DPEP1P16444 411 aa19.73■□□□□ 0.75
FBXO28-204ENST00000519894 ZNF784Q8NCA9 323 aaPredicted RBP19.73■□□□□ 0.75
FBXO28-204ENST00000519894 SP7Q8TDD2 431 aaPredicted RBP19.73■□□□□ 0.75
FBXO28-204ENST00000519894 PNISRQ8TF01 805 aaKnown RBP19.73■□□□□ 0.75
FBXO28-204ENST00000519894 ZNF330Q9Y3S2 320 aaPredicted RBP19.73■□□□□ 0.75
FBXO28-204ENST00000519894 TMPOP42166 694 aaKnown RBP19.72■□□□□ 0.75
FBXO28-204ENST00000519894 PIP4K2AP48426 406 aaPredicted RBP19.72■□□□□ 0.75
FBXO28-204ENST00000519894 RIPK4P57078 832 aa19.72■□□□□ 0.75
FBXO28-204ENST00000519894 TBC1D2BQ9UPU7 963 aa19.72■□□□□ 0.75
FBXO28-204ENST00000519894 KDM3BQ7LBC6 1761 aa19.71■□□□□ 0.75
FBXO28-204ENST00000519894 CCDC146Q8IYE0 955 aa19.71■□□□□ 0.75
FBXO28-204ENST00000519894 UTRNP46939 3433 aa19.7■□□□□ 0.74
FBXO28-204ENST00000519894 KCNA3P22001 575 aa19.7■□□□□ 0.74
FBXO28-204ENST00000519894 ADAMTS8Q9UP79 889 aa19.7■□□□□ 0.74
FBXO28-204ENST00000519894 AFDNP55196 1824 aaKnown RBP19.69■□□□□ 0.74
FBXO28-204ENST00000519894 NRXN2Q9P2S2 1712 aa19.69■□□□□ 0.74
FBXO28-204ENST00000519894 SERPINB2P05120 415 aa19.69■□□□□ 0.74
FBXO28-204ENST00000519894 EIF4A1P60842 406 aaKnown RBP19.69■□□□□ 0.74
FBXO28-204ENST00000519894 WDR43Q15061 677 aaKnown RBP eCLIP19.69■□□□□ 0.74
FBXO28-204ENST00000519894 TBC1D9BQ66K14 1250 aa19.69■□□□□ 0.74
FBXO28-204ENST00000519894 NBPF26B4DH59 902 aa19.68■□□□□ 0.74
FBXO28-204ENST00000519894 CAMTA2O94983 1202 aa19.68■□□□□ 0.74
FBXO28-204ENST00000519894 NBPF10Q6P3W6 841 aaKnown RBP19.68■□□□□ 0.74
FBXO28-204ENST00000519894 BICDL1Q6ZP65 573 aa19.68■□□□□ 0.74
FBXO28-204ENST00000519894 NBPF15Q8N660 670 aa19.68■□□□□ 0.74
FBXO28-204ENST00000519894 RUNDC1Q96C34 613 aa19.68■□□□□ 0.74
FBXO28-204ENST00000519894 BCS1LQ9Y276 419 aa19.68■□□□□ 0.74
FBXO28-204ENST00000519894 RRP7AQ9Y3A4 280 aaKnown RBP19.68■□□□□ 0.74
FBXO28-204ENST00000519894 GIGYF1O75420 1035 aaPredicted RBP19.67■□□□□ 0.74
FBXO28-204ENST00000519894 NPM2Q86SE8 214 aaKnown RBP19.67■□□□□ 0.74
FBXO28-204ENST00000519894 DZIP3Q86Y13 1208 aaKnown RBP19.67■□□□□ 0.74
FBXO28-204ENST00000519894 SCN7AQ01118 1682 aa19.67■□□□□ 0.74
FBXO28-204ENST00000519894 BRCA1P38398 1863 aaKnown RBP19.67■□□□□ 0.74
FBXO28-204ENST00000519894 ZNF316A6NFI3 1004 aaPredicted RBP19.66■□□□□ 0.74
FBXO28-204ENST00000519894 CHRNA5P30532 468 aa19.66■□□□□ 0.74
FBXO28-204ENST00000519894 LMOD3Q0VAK6 560 aa19.65■□□□□ 0.74
FBXO28-204ENST00000519894 NEUROD2Q15784 382 aa19.65■□□□□ 0.74
FBXO28-204ENST00000519894 PIM2Q9P1W9 311 aa19.65■□□□□ 0.74
FBXO28-204ENST00000519894 TSPYL4Q9UJ04 414 aa19.64■□□□□ 0.73
FBXO28-204ENST00000519894 LAMB4A4D0S4 1761 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms