RNA–Protein interactions for RNA: ENST00000519788.6

SCUBE2-206, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5

Gene SCUBE2, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-206ENST00000519788 RNF25Q96BH1 459 aaPredicted RBP10.48□□□□□ -0.73
SCUBE2-206ENST00000519788 AK7Q96M32 723 aa10.48□□□□□ -0.73
SCUBE2-206ENST00000519788 SPON1Q9HCB6 807 aa10.48□□□□□ -0.73
SCUBE2-206ENST00000519788 MAPK8IP3Q9UPT6 1336 aa10.48□□□□□ -0.73
SCUBE2-206ENST00000519788 COL5A3P25940 1745 aaPredicted RBP10.47□□□□□ -0.73
SCUBE2-206ENST00000519788 TJP1Q07157 1748 aa10.47□□□□□ -0.73
SCUBE2-206ENST00000519788 HTATSF1O43719 755 aaKnown RBP10.47□□□□□ -0.73
SCUBE2-206ENST00000519788 COL23A1Q86Y22 540 aaPredicted RBP10.47□□□□□ -0.73
SCUBE2-206ENST00000519788 KCPQ6ZWJ8 1503 aa10.47□□□□□ -0.73
SCUBE2-206ENST00000519788 UBR2Q8IWV8 1755 aa10.47□□□□□ -0.73
SCUBE2-206ENST00000519788 UBR3Q6ZT12 1888 aa10.47□□□□□ -0.73
SCUBE2-206ENST00000519788 GNPATO15228 680 aa10.46□□□□□ -0.73
SCUBE2-206ENST00000519788 KCNQ3O43525 872 aa10.46□□□□□ -0.73
SCUBE2-206ENST00000519788 PHF14O94880 888 aa10.46□□□□□ -0.73
SCUBE2-206ENST00000519788 HMGB2P26583 209 aaKnown RBP10.46□□□□□ -0.73
SCUBE2-206ENST00000519788 THUMPD2Q9BTF0 503 aaKnown RBP10.46□□□□□ -0.73
SCUBE2-206ENST00000519788 RRP7AQ9Y3A4 280 aaKnown RBP10.46□□□□□ -0.73
SCUBE2-206ENST00000519788 BTBD11A6QL63 1104 aa10.45□□□□□ -0.74
SCUBE2-206ENST00000519788 TMPOP42166 694 aaKnown RBP10.45□□□□□ -0.74
SCUBE2-206ENST00000519788 RIPK4P57078 832 aa10.45□□□□□ -0.74
SCUBE2-206ENST00000519788 ZNF790Q6PG37 636 aa10.45□□□□□ -0.74
SCUBE2-206ENST00000519788 DNAJC10Q8IXB1 793 aa10.45□□□□□ -0.74
SCUBE2-206ENST00000519788 TTC5Q8N0Z6 440 aa10.45□□□□□ -0.74
SCUBE2-206ENST00000519788 RUNDC1Q96C34 613 aa10.45□□□□□ -0.74
SCUBE2-206ENST00000519788 ZNF496Q96IT1 587 aaPredicted RBP10.45□□□□□ -0.74
SCUBE2-206ENST00000519788 MTFR1LQ9H019 292 aa10.45□□□□□ -0.74
SCUBE2-206ENST00000519788 MYH14Q7Z406 1995 aaKnown RBP10.45□□□□□ -0.74
SCUBE2-206ENST00000519788 CICQ96RK0 1608 aaPredicted RBP10.44□□□□□ -0.74
SCUBE2-206ENST00000519788 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.44□□□□□ -0.74
SCUBE2-206ENST00000519788 PTGER2P43116 358 aa10.44□□□□□ -0.74
SCUBE2-206ENST00000519788 CRKLP46109 303 aaKnown RBP10.44□□□□□ -0.74
SCUBE2-206ENST00000519788 NBR1Q14596 966 aa10.44□□□□□ -0.74
SCUBE2-206ENST00000519788 NEUROD2Q15784 382 aa10.44□□□□□ -0.74
SCUBE2-206ENST00000519788 RC3H1Q5TC82 1133 aaKnown RBP10.44□□□□□ -0.74
SCUBE2-206ENST00000519788 MIS18AQ9NYP9 233 aa10.44□□□□□ -0.74
SCUBE2-206ENST00000519788 CNTNAP4Q9C0A0 1308 aa10.43□□□□□ -0.74
SCUBE2-206ENST00000519788 CYP19A1P11511 503 aaPredicted RBP10.43□□□□□ -0.74
SCUBE2-206ENST00000519788 GSE1Q14687 1217 aa10.43□□□□□ -0.74
SCUBE2-206ENST00000519788 TAF7Q15545 349 aaPredicted RBP10.43□□□□□ -0.74
SCUBE2-206ENST00000519788 MSL1Q68DK7 614 aa10.43□□□□□ -0.74
SCUBE2-206ENST00000519788 INTS5Q6P9B9 1019 aaKnown RBP10.43□□□□□ -0.74
SCUBE2-206ENST00000519788 FLAD1Q8NFF5 587 aa10.43□□□□□ -0.74
SCUBE2-206ENST00000519788 SLC16A10Q8TF71 515 aa10.43□□□□□ -0.74
SCUBE2-206ENST00000519788 SGIP1Q9BQI5 828 aa10.43□□□□□ -0.74
SCUBE2-206ENST00000519788 MRS2Q9HD23 443 aa10.43□□□□□ -0.74
SCUBE2-206ENST00000519788 PPP1R1BQ9UD71 204 aaPredicted RBP10.43□□□□□ -0.74
SCUBE2-206ENST00000519788 COL24A1Q17RW2 1714 aa10.42□□□□□ -0.74
SCUBE2-206ENST00000519788 RPS6KA4O75676 772 aa10.42□□□□□ -0.74
SCUBE2-206ENST00000519788 SSFA2P28290 1259 aa10.42□□□□□ -0.74
SCUBE2-206ENST00000519788 PNISRQ8TF01 805 aaKnown RBP10.42□□□□□ -0.74
SCUBE2-206ENST00000519788 FMNL2Q96PY5 1086 aa10.42□□□□□ -0.74
SCUBE2-206ENST00000519788 RTCBQ9Y3I0 505 aaKnown RBP10.42□□□□□ -0.74
SCUBE2-206ENST00000519788 HEG1Q9ULI3 1381 aa10.41□□□□□ -0.74
SCUBE2-206ENST00000519788 SENP3-EIF4A1A0A087X0R7 540 aa10.41□□□□□ -0.74
SCUBE2-206ENST00000519788 NUBP1P53384 320 aa10.41□□□□□ -0.74
SCUBE2-206ENST00000519788 TRAPPC3LQ5T215 181 aa10.41□□□□□ -0.74
SCUBE2-206ENST00000519788 ARHGEF1Q92888 912 aaKnown RBP10.41□□□□□ -0.74
SCUBE2-206ENST00000519788 CCDC87Q9NVE4 849 aa10.41□□□□□ -0.74
SCUBE2-206ENST00000519788 TRIM35Q9UPQ4 493 aa10.41□□□□□ -0.74
SCUBE2-206ENST00000519788 KDM3BQ7LBC6 1761 aa10.4□□□□□ -0.74
SCUBE2-206ENST00000519788 PRAMEF22A3QJZ6 481 aa10.4□□□□□ -0.74
SCUBE2-206ENST00000519788 APAF1O14727 1248 aa10.4□□□□□ -0.74
SCUBE2-206ENST00000519788 STARD3NLO95772 234 aa10.4□□□□□ -0.74
SCUBE2-206ENST00000519788 LMOD3Q0VAK6 560 aa10.4□□□□□ -0.74
SCUBE2-206ENST00000519788 ARXQ96QS3 562 aa10.4□□□□□ -0.74
SCUBE2-206ENST00000519788 C4AP0C0L4 1744 aa10.39□□□□□ -0.75
SCUBE2-206ENST00000519788 CANXP27824 592 aaKnown RBP10.39□□□□□ -0.75
SCUBE2-206ENST00000519788 POLD1P28340 1107 aa10.39□□□□□ -0.75
SCUBE2-206ENST00000519788 RFC4P35249 363 aa10.39□□□□□ -0.75
SCUBE2-206ENST00000519788 POTEDQ86YR6 584 aa10.39□□□□□ -0.75
SCUBE2-206ENST00000519788 TEX13AQ9BXU3 409 aaPredicted RBP10.39□□□□□ -0.75
SCUBE2-206ENST00000519788 ZBTB1Q9Y2K1 713 aa10.39□□□□□ -0.75
SCUBE2-206ENST00000519788 USP16Q9Y5T5 823 aa10.39□□□□□ -0.75
SCUBE2-206ENST00000519788 SOS1Q07889 1333 aaPredicted RBP10.38□□□□□ -0.75
SCUBE2-206ENST00000519788 A1BGP04217 495 aa10.38□□□□□ -0.75
SCUBE2-206ENST00000519788 SNRPA1P09661 255 aaKnown RBP10.38□□□□□ -0.75
SCUBE2-206ENST00000519788 FHDC1Q9C0D6 1143 aaPredicted RBP10.38□□□□□ -0.75
SCUBE2-206ENST00000519788 SRP68Q9UHB9 627 aaKnown RBP10.38□□□□□ -0.75
SCUBE2-206ENST00000519788 TSPYL4Q9UJ04 414 aa10.38□□□□□ -0.75
SCUBE2-206ENST00000519788 LAS1LQ9Y4W2 734 aaKnown RBP10.38□□□□□ -0.75
SCUBE2-206ENST00000519788 RIOK3O14730 519 aaKnown RBP10.37□□□□□ -0.75
SCUBE2-206ENST00000519788 GYS1P13807 737 aa10.37□□□□□ -0.75
SCUBE2-206ENST00000519788 PIP4K2AP48426 406 aaPredicted RBP10.37□□□□□ -0.75
SCUBE2-206ENST00000519788 EIF4A1P60842 406 aaKnown RBP10.37□□□□□ -0.75
SCUBE2-206ENST00000519788 DCAF8Q5TAQ9 597 aa10.36□□□□□ -0.75
SCUBE2-206ENST00000519788 FAM9BQ8IZU0 186 aa10.36□□□□□ -0.75
SCUBE2-206ENST00000519788 ZNF330Q9Y3S2 320 aaPredicted RBP10.36□□□□□ -0.75
SCUBE2-206ENST00000519788 COL15A1P39059 1388 aa10.36□□□□□ -0.75
SCUBE2-206ENST00000519788 USP42Q9H9J4 1324 aaKnown RBP10.35□□□□□ -0.75
SCUBE2-206ENST00000519788 CHL1O00533 1208 aa10.35□□□□□ -0.75
SCUBE2-206ENST00000519788 GTPBP6O43824 516 aaPredicted RBP10.35□□□□□ -0.75
SCUBE2-206ENST00000519788 GIGYF1O75420 1035 aaPredicted RBP10.35□□□□□ -0.75
SCUBE2-206ENST00000519788 MMP10P09238 476 aa10.35□□□□□ -0.75
SCUBE2-206ENST00000519788 EIF5P55010 431 aaKnown RBP10.35□□□□□ -0.75
SCUBE2-206ENST00000519788 USPL1Q5W0Q7 1092 aa10.35□□□□□ -0.75
SCUBE2-206ENST00000519788 NLGN1Q8N2Q7 840 aa10.35□□□□□ -0.75
SCUBE2-206ENST00000519788 SYT17Q9BSW7 474 aa10.35□□□□□ -0.75
SCUBE2-206ENST00000519788 LAMB4A4D0S4 1761 aa10.34□□□□□ -0.75
SCUBE2-206ENST00000519788 NBPF26B4DH59 902 aa10.34□□□□□ -0.75
SCUBE2-206ENST00000519788 ZPR1O75312 459 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms