RNA–Protein interactions for RNA: ENST00000519643.5

SH3PXD2B-203, Transcript of SH3 and PX domains 2B, humanhuman

TSL 1 (best) BASIC

Gene SH3PXD2B, Length 1,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2B-203ENST00000519643 MIS18AQ9NYP9 233 aa19.4■□□□□ 0.7
SH3PXD2B-203ENST00000519643 SIPA1L3O60292 1781 aaPredicted RBP19.4■□□□□ 0.7
SH3PXD2B-203ENST00000519643 TEFQ10587 303 aa19.39■□□□□ 0.69
SH3PXD2B-203ENST00000519643 COL23A1Q86Y22 540 aaPredicted RBP19.39■□□□□ 0.69
SH3PXD2B-203ENST00000519643 BCL2L13Q9BXK5 485 aa19.39■□□□□ 0.69
SH3PXD2B-203ENST00000519643 SMC4Q9NTJ3 1288 aa19.39■□□□□ 0.69
SH3PXD2B-203ENST00000519643 CCNL1Q9UK58 526 aaPredicted RBP19.39■□□□□ 0.69
SH3PXD2B-203ENST00000519643 KDM3BQ7LBC6 1761 aa19.38■□□□□ 0.69
SH3PXD2B-203ENST00000519643 KDM6AO15550 1401 aaPredicted RBP19.38■□□□□ 0.69
SH3PXD2B-203ENST00000519643 CYP27B1O15528 508 aa19.38■□□□□ 0.69
SH3PXD2B-203ENST00000519643 ZCRB1Q8TBF4 217 aaKnown RBP19.38■□□□□ 0.69
SH3PXD2B-203ENST00000519643 C20orf194Q5TEA3 1177 aa19.37■□□□□ 0.69
SH3PXD2B-203ENST00000519643 IFFO2Q5TF58 517 aa19.37■□□□□ 0.69
SH3PXD2B-203ENST00000519643 PCDH11XQ9BZA7 1347 aa19.36■□□□□ 0.69
SH3PXD2B-203ENST00000519643 PCDH11YQ9BZA8 1340 aa19.36■□□□□ 0.69
SH3PXD2B-203ENST00000519643 ELL2O00472 640 aaPredicted RBP19.36■□□□□ 0.69
SH3PXD2B-203ENST00000519643 GRIN3BO60391 1043 aa19.36■□□□□ 0.69
SH3PXD2B-203ENST00000519643 HSP90AB1P08238 724 aaKnown RBP19.36■□□□□ 0.69
SH3PXD2B-203ENST00000519643 CANXP27824 592 aaKnown RBP19.36■□□□□ 0.69
SH3PXD2B-203ENST00000519643 PPP4R2Q9NY27 417 aa19.36■□□□□ 0.69
SH3PXD2B-203ENST00000519643 ATP10DQ9P241 1426 aa19.36■□□□□ 0.69
SH3PXD2B-203ENST00000519643 KRT24Q2M2I5 525 aa19.35■□□□□ 0.69
SH3PXD2B-203ENST00000519643 MSL1Q68DK7 614 aa19.35■□□□□ 0.69
SH3PXD2B-203ENST00000519643 EXOC6Q8TAG9 804 aa19.35■□□□□ 0.69
SH3PXD2B-203ENST00000519643 FRAT1Q92837 279 aaPredicted RBP19.35■□□□□ 0.69
SH3PXD2B-203ENST00000519643 BRPF1P55201 1214 aaPredicted RBP19.34■□□□□ 0.69
SH3PXD2B-203ENST00000519643 PDE3AQ14432 1141 aa19.34■□□□□ 0.69
SH3PXD2B-203ENST00000519643 DCAF5Q96JK2 942 aa19.34■□□□□ 0.69
SH3PXD2B-203ENST00000519643 CRBNQ96SW2 442 aa19.34■□□□□ 0.69
SH3PXD2B-203ENST00000519643 MRC1P22897 1456 aa19.34■□□□□ 0.69
SH3PXD2B-203ENST00000519643 MSH5O43196 834 aa19.33■□□□□ 0.69
SH3PXD2B-203ENST00000519643 C5P01031 1676 aa19.33■□□□□ 0.69
SH3PXD2B-203ENST00000519643 KIF16BQ96L93 1317 aa19.33■□□□□ 0.68
SH3PXD2B-203ENST00000519643 BTBD11A6QL63 1104 aa19.32■□□□□ 0.68
SH3PXD2B-203ENST00000519643 MRPL50Q8N5N7 158 aaKnown RBP19.32■□□□□ 0.68
SH3PXD2B-203ENST00000519643 SOS1Q07889 1333 aaPredicted RBP19.32■□□□□ 0.68
SH3PXD2B-203ENST00000519643 ZKSCAN2Q63HK3 967 aa19.32■□□□□ 0.68
SH3PXD2B-203ENST00000519643 SLC52A2Q9HAB3 445 aa19.32■□□□□ 0.68
SH3PXD2B-203ENST00000519643 ADCY9O60503 1353 aa19.31■□□□□ 0.68
SH3PXD2B-203ENST00000519643 NKX1-1Q15270 411 aaPredicted RBP19.31■□□□□ 0.68
SH3PXD2B-203ENST00000519643 TAF1LQ8IZX4 1826 aa19.3■□□□□ 0.68
SH3PXD2B-203ENST00000519643 EIF4A1P60842 406 aaKnown RBP19.3■□□□□ 0.68
SH3PXD2B-203ENST00000519643 NOB1Q9ULX3 412 aaKnown RBP19.3■□□□□ 0.68
SH3PXD2B-203ENST00000519643 CD2APQ9Y5K6 639 aa19.3■□□□□ 0.68
SH3PXD2B-203ENST00000519643 IPO8O15397 1037 aaKnown RBP19.29■□□□□ 0.68
SH3PXD2B-203ENST00000519643 MS4A1P11836 297 aa19.29■□□□□ 0.68
SH3PXD2B-203ENST00000519643 TOGARAM1Q9Y4F4 1720 aa19.29■□□□□ 0.68
SH3PXD2B-203ENST00000519643 TCERG1O14776 1098 aaKnown RBP19.28■□□□□ 0.68
SH3PXD2B-203ENST00000519643 KCNQ3O43525 872 aa19.28■□□□□ 0.68
SH3PXD2B-203ENST00000519643 AMIGO3Q86WK7 504 aa19.28■□□□□ 0.68
SH3PXD2B-203ENST00000519643 PANK1Q8TE04 598 aa19.28■□□□□ 0.68
SH3PXD2B-203ENST00000519643 TNNQ9UQP3 1299 aa19.28■□□□□ 0.68
SH3PXD2B-203ENST00000519643 PALLDQ8WX93 1383 aa19.27■□□□□ 0.68
SH3PXD2B-203ENST00000519643 ATF7IPQ6VMQ6 1270 aa19.27■□□□□ 0.68
SH3PXD2B-203ENST00000519643 HOXB7P09629 217 aa19.26■□□□□ 0.67
SH3PXD2B-203ENST00000519643 RLBP1P12271 317 aa19.26■□□□□ 0.67
SH3PXD2B-203ENST00000519643 TRIM27P14373 513 aa19.26■□□□□ 0.67
SH3PXD2B-203ENST00000519643 DZIP1LQ8IYY4 767 aaKnown RBP19.26■□□□□ 0.67
SH3PXD2B-203ENST00000519643 NFATC2IPQ8NCF5 419 aa19.26■□□□□ 0.67
SH3PXD2B-203ENST00000519643 ARHGAP45Q92619 1136 aa19.26■□□□□ 0.67
SH3PXD2B-203ENST00000519643 C4BP0C0L5 1744 aa19.25■□□□□ 0.67
SH3PXD2B-203ENST00000519643 ERVV-2B6SEH9 535 aa19.25■□□□□ 0.67
SH3PXD2B-203ENST00000519643 CABP4P57796 275 aa19.25■□□□□ 0.67
SH3PXD2B-203ENST00000519643 HEG1Q9ULI3 1381 aa19.24■□□□□ 0.67
SH3PXD2B-203ENST00000519643 CCDC30Q5VVM6 783 aa19.24■□□□□ 0.67
SH3PXD2B-203ENST00000519643 FTSJ3Q8IY81 847 aaKnown RBP19.24■□□□□ 0.67
SH3PXD2B-203ENST00000519643 CLUAP1Q96AJ1 413 aa19.24■□□□□ 0.67
SH3PXD2B-203ENST00000519643 GPBP1L1Q9HC44 474 aaPredicted RBP19.24■□□□□ 0.67
SH3PXD2B-203ENST00000519643 COG6Q9Y2V7 657 aa19.24■□□□□ 0.67
SH3PXD2B-203ENST00000519643 B4GALNT3Q6L9W6 998 aa19.23■□□□□ 0.67
SH3PXD2B-203ENST00000519643 ZNF790Q6PG37 636 aa19.23■□□□□ 0.67
SH3PXD2B-203ENST00000519643 FLAD1Q8NFF5 587 aa19.23■□□□□ 0.67
SH3PXD2B-203ENST00000519643 CACNA1FO60840 1977 aa19.23■□□□□ 0.67
SH3PXD2B-203ENST00000519643 UBR3Q6ZT12 1888 aa19.23■□□□□ 0.67
SH3PXD2B-203ENST00000519643 SMIM5Q71RC9 77 aa19.22■□□□□ 0.67
SH3PXD2B-203ENST00000519643 CCDC136Q96JN2 1154 aa19.22■□□□□ 0.67
SH3PXD2B-203ENST00000519643 ITGB4P16144 1822 aa19.21■□□□□ 0.67
SH3PXD2B-203ENST00000519643 HSPA6P17066 643 aa19.21■□□□□ 0.67
SH3PXD2B-203ENST00000519643 SLC39A6Q13433 755 aa19.21■□□□□ 0.67
SH3PXD2B-203ENST00000519643 ZNF526Q8TF50 670 aaPredicted RBP19.21■□□□□ 0.67
SH3PXD2B-203ENST00000519643 STK31Q9BXU1 1019 aa19.21■□□□□ 0.67
SH3PXD2B-203ENST00000519643 CHMP4AQ9BY43 222 aa19.21■□□□□ 0.67
SH3PXD2B-203ENST00000519643 API5Q9BZZ5 524 aaKnown RBP19.21■□□□□ 0.67
SH3PXD2B-203ENST00000519643 SLC4A2P04920 1241 aa19.2■□□□□ 0.66
SH3PXD2B-203ENST00000519643 MVPQ14764 893 aaKnown RBP19.2■□□□□ 0.66
SH3PXD2B-203ENST00000519643 HDGFL1Q5TGJ6 251 aa19.2■□□□□ 0.66
SH3PXD2B-203ENST00000519643 WWC3Q9ULE0 1092 aa19.19■□□□□ 0.66
SH3PXD2B-203ENST00000519643 PTPRCP08575 1304 aa19.19■□□□□ 0.66
SH3PXD2B-203ENST00000519643 TTC5Q8N0Z6 440 aa19.19■□□□□ 0.66
SH3PXD2B-203ENST00000519643 NECTIN2Q92692 538 aa19.19■□□□□ 0.66
SH3PXD2B-203ENST00000519643 ABCC4O15439 1325 aa19.18■□□□□ 0.66
SH3PXD2B-203ENST00000519643 UBR2Q8IWV8 1755 aa19.18■□□□□ 0.66
SH3PXD2B-203ENST00000519643 AAMPQ13685 434 aa19.18■□□□□ 0.66
SH3PXD2B-203ENST00000519643 TMEM57Q8N5G2 664 aa19.18■□□□□ 0.66
SH3PXD2B-203ENST00000519643 AK7Q96M32 723 aa19.18■□□□□ 0.66
SH3PXD2B-203ENST00000519643 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.17■□□□□ 0.66
SH3PXD2B-203ENST00000519643 PHF14O94880 888 aa19.17■□□□□ 0.66
SH3PXD2B-203ENST00000519643 EIF2S2P20042 333 aaKnown RBP19.17■□□□□ 0.66
SH3PXD2B-203ENST00000519643 G2E3Q7L622 706 aa19.17■□□□□ 0.66
SH3PXD2B-203ENST00000519643 PIGBQ92521 554 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms