RNA–Protein interactions for RNA: ENST00000519535.1

SCUBE2-205, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 3

Gene SCUBE2, Length 738 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-205ENST00000519535 PRKRIP1Q9H875 184 aaPredicted RBP18.04■□□□□ 0.48
SCUBE2-205ENST00000519535 NFE2L2Q16236 605 aa18.03■□□□□ 0.48
SCUBE2-205ENST00000519535 GPR162Q16538 588 aa18.03■□□□□ 0.48
SCUBE2-205ENST00000519535 CCDC184Q52MB2 194 aa18.03■□□□□ 0.48
SCUBE2-205ENST00000519535 USPL1Q5W0Q7 1092 aa18.03■□□□□ 0.48
SCUBE2-205ENST00000519535 TTC5Q8N0Z6 440 aa18.03■□□□□ 0.48
SCUBE2-205ENST00000519535 USP16Q9Y5T5 823 aa18.03■□□□□ 0.48
SCUBE2-205ENST00000519535 TM4SF1P30408 202 aa18.02■□□□□ 0.48
SCUBE2-205ENST00000519535 EIF5P55010 431 aaKnown RBP18.02■□□□□ 0.48
SCUBE2-205ENST00000519535 CCDC146Q8IYE0 955 aa18.02■□□□□ 0.48
SCUBE2-205ENST00000519535 NLGN1Q8N2Q7 840 aa18.02■□□□□ 0.48
SCUBE2-205ENST00000519535 COL15A1P39059 1388 aa18.02■□□□□ 0.47
SCUBE2-205ENST00000519535 C10orf71Q711Q0 1435 aa18.01■□□□□ 0.47
SCUBE2-205ENST00000519535 FMNL2Q96PY5 1086 aa18.01■□□□□ 0.47
SCUBE2-205ENST00000519535 PXDNLA1KZ92 1463 aa18.01■□□□□ 0.47
SCUBE2-205ENST00000519535 HTATSF1O43719 755 aaKnown RBP18■□□□□ 0.47
SCUBE2-205ENST00000519535 RTF1Q92541 710 aaKnown RBP18■□□□□ 0.47
SCUBE2-205ENST00000519535 RRP7AQ9Y3A4 280 aaKnown RBP18■□□□□ 0.47
SCUBE2-205ENST00000519535 KIAA1551Q9HCM1 1747 aa17.99■□□□□ 0.47
SCUBE2-205ENST00000519535 NBPF26B4DH59 902 aa17.99■□□□□ 0.47
SCUBE2-205ENST00000519535 POLRMTO00411 1230 aaKnown RBP17.99■□□□□ 0.47
SCUBE2-205ENST00000519535 NFIXQ14938 502 aa17.99■□□□□ 0.47
SCUBE2-205ENST00000519535 NBPF10Q6P3W6 841 aaKnown RBP17.99■□□□□ 0.47
SCUBE2-205ENST00000519535 NBPF15Q8N660 670 aa17.99■□□□□ 0.47
SCUBE2-205ENST00000519535 NARFQ9UHQ1 456 aa17.99■□□□□ 0.47
SCUBE2-205ENST00000519535 A0A0G2JLW4 131 aa17.98■□□□□ 0.47
SCUBE2-205ENST00000519535 TAF7Q15545 349 aaPredicted RBP17.98■□□□□ 0.47
SCUBE2-205ENST00000519535 ADAMTS8Q9UP79 889 aa17.98■□□□□ 0.47
SCUBE2-205ENST00000519535 STARD3NLO95772 234 aa17.97■□□□□ 0.47
SCUBE2-205ENST00000519535 DPEP1P16444 411 aa17.97■□□□□ 0.47
SCUBE2-205ENST00000519535 KCNA3P22001 575 aa17.97■□□□□ 0.47
SCUBE2-205ENST00000519535 TBC1D2BQ9UPU7 963 aa17.97■□□□□ 0.47
SCUBE2-205ENST00000519535 DCAF8L1A6NGE4 600 aa17.96■□□□□ 0.47
SCUBE2-205ENST00000519535 ZEB1P37275 1124 aaPredicted RBP17.96■□□□□ 0.47
SCUBE2-205ENST00000519535 TMPOP42166 694 aaKnown RBP17.96■□□□□ 0.47
SCUBE2-205ENST00000519535 PARP3Q9Y6F1 533 aa17.95■□□□□ 0.46
SCUBE2-205ENST00000519535 CARMIL3Q8ND23 1372 aa17.94■□□□□ 0.46
SCUBE2-205ENST00000519535 ZPR1O75312 459 aa17.94■□□□□ 0.46
SCUBE2-205ENST00000519535 CAMTA2O94983 1202 aa17.94■□□□□ 0.46
SCUBE2-205ENST00000519535 RIPK4P57078 832 aa17.94■□□□□ 0.46
SCUBE2-205ENST00000519535 EIF4A1P60842 406 aaKnown RBP17.94■□□□□ 0.46
SCUBE2-205ENST00000519535 TBC1D9BQ66K14 1250 aa17.94■□□□□ 0.46
SCUBE2-205ENST00000519535 TRIM35Q9UPQ4 493 aa17.94■□□□□ 0.46
SCUBE2-205ENST00000519535 ZNF330Q9Y3S2 320 aaPredicted RBP17.94■□□□□ 0.46
SCUBE2-205ENST00000519535 MAPK8IP3Q9UPT6 1336 aa17.94■□□□□ 0.46
SCUBE2-205ENST00000519535 DLG5Q8TDM6 1919 aa17.94■□□□□ 0.46
SCUBE2-205ENST00000519535 SNRPA1P09661 255 aaKnown RBP17.93■□□□□ 0.46
SCUBE2-205ENST00000519535 CHRNA5P30532 468 aa17.93■□□□□ 0.46
SCUBE2-205ENST00000519535 IL6STP40189 918 aaPredicted RBP17.93■□□□□ 0.46
SCUBE2-205ENST00000519535 CCDC24Q8N4L8 307 aa17.93■□□□□ 0.46
SCUBE2-205ENST00000519535 ZNF784Q8NCA9 323 aaPredicted RBP17.93■□□□□ 0.46
SCUBE2-205ENST00000519535 BICDL1Q6ZP65 573 aa17.92■□□□□ 0.46
SCUBE2-205ENST00000519535 TEX13AQ9BXU3 409 aaPredicted RBP17.92■□□□□ 0.46
SCUBE2-205ENST00000519535 KIF13BQ9NQT8 1826 aa17.91■□□□□ 0.46
SCUBE2-205ENST00000519535 ZNF316A6NFI3 1004 aaPredicted RBP17.91■□□□□ 0.46
SCUBE2-205ENST00000519535 GIGYF1O75420 1035 aaPredicted RBP17.91■□□□□ 0.46
SCUBE2-205ENST00000519535 NEUROD2Q15784 382 aa17.91■□□□□ 0.46
SCUBE2-205ENST00000519535 SENP3-EIF4A1A0A087X0R7 540 aa17.9■□□□□ 0.46
SCUBE2-205ENST00000519535 KRT24Q2M2I5 525 aa17.9■□□□□ 0.46
SCUBE2-205ENST00000519535 KDM3BQ7LBC6 1761 aa17.89■□□□□ 0.45
SCUBE2-205ENST00000519535 N4BP2Q86UW6 1770 aaPredicted RBP17.89■□□□□ 0.45
SCUBE2-205ENST00000519535 SERPINB2P05120 415 aa17.89■□□□□ 0.45
SCUBE2-205ENST00000519535 TGFB2P61812 414 aa17.89■□□□□ 0.45
SCUBE2-205ENST00000519535 GRIN3BO60391 1043 aa17.88■□□□□ 0.45
SCUBE2-205ENST00000519535 RUNDC1Q96C34 613 aa17.88■□□□□ 0.45
SCUBE2-205ENST00000519535 A0A087WZG4 1122 aa17.87■□□□□ 0.45
SCUBE2-205ENST00000519535 NEFMP07197 916 aa17.87■□□□□ 0.45
SCUBE2-205ENST00000519535 WDR43Q15061 677 aaKnown RBP eCLIP17.87■□□□□ 0.45
SCUBE2-205ENST00000519535 HLFQ16534 295 aa17.87■□□□□ 0.45
SCUBE2-205ENST00000519535 DZIP3Q86Y13 1208 aaKnown RBP17.87■□□□□ 0.45
SCUBE2-205ENST00000519535 BCS1LQ9Y276 419 aa17.87■□□□□ 0.45
SCUBE2-205ENST00000519535 SCN7AQ01118 1682 aa17.87■□□□□ 0.45
SCUBE2-205ENST00000519535 PROSER3Q2NL68 480 aa17.86■□□□□ 0.45
SCUBE2-205ENST00000519535 TTLL7Q6ZT98 887 aa17.86■□□□□ 0.45
SCUBE2-205ENST00000519535 LRP10Q7Z4F1 713 aa17.86■□□□□ 0.45
SCUBE2-205ENST00000519535 PNNQ9H307 717 aaKnown RBP17.86■□□□□ 0.45
SCUBE2-205ENST00000519535 TSPYL4Q9UJ04 414 aa17.86■□□□□ 0.45
SCUBE2-205ENST00000519535 NRXN2Q9P2S2 1712 aa17.86■□□□□ 0.45
SCUBE2-205ENST00000519535 PDIA6Q15084 440 aa17.85■□□□□ 0.45
SCUBE2-205ENST00000519535 PRR5LQ6MZQ0 368 aa17.85■□□□□ 0.45
SCUBE2-205ENST00000519535 PNISRQ8TF01 805 aaKnown RBP17.85■□□□□ 0.45
SCUBE2-205ENST00000519535 APAF1O14727 1248 aa17.84■□□□□ 0.45
SCUBE2-205ENST00000519535 ANXA1P04083 346 aa17.84■□□□□ 0.45
SCUBE2-205ENST00000519535 NGEFQ8N5V2 710 aa17.84■□□□□ 0.45
SCUBE2-205ENST00000519535 AFDNP55196 1824 aaKnown RBP17.84■□□□□ 0.45
SCUBE2-205ENST00000519535 ADCY9O60503 1353 aa17.83■□□□□ 0.45
SCUBE2-205ENST00000519535 CHL1O00533 1208 aa17.83■□□□□ 0.44
SCUBE2-205ENST00000519535 PRELPP51888 382 aa17.82■□□□□ 0.44
SCUBE2-205ENST00000519535 MYL6BP14649 208 aa17.81■□□□□ 0.44
SCUBE2-205ENST00000519535 NECTIN2Q92692 538 aa17.81■□□□□ 0.44
SCUBE2-205ENST00000519535 ATP10DQ9P241 1426 aa17.81■□□□□ 0.44
SCUBE2-205ENST00000519535 BRCA1P38398 1863 aaKnown RBP17.8■□□□□ 0.44
SCUBE2-205ENST00000519535 C2CD5Q86YS7 1000 aa17.8■□□□□ 0.44
SCUBE2-205ENST00000519535 PIM2Q9P1W9 311 aa17.8■□□□□ 0.44
SCUBE2-205ENST00000519535 BCORQ6W2J9 1755 aa17.8■□□□□ 0.44
SCUBE2-205ENST00000519535 CHD4Q14839 1912 aa17.79■□□□□ 0.44
SCUBE2-205ENST00000519535 EIF2S2P20042 333 aaKnown RBP17.79■□□□□ 0.44
SCUBE2-205ENST00000519535 DALRD3Q5D0E6 543 aaKnown RBP17.79■□□□□ 0.44
SCUBE2-205ENST00000519535 ARHGAP27Q6ZUM4 889 aa17.79■□□□□ 0.44
SCUBE2-205ENST00000519535 LAS1LQ9Y4W2 734 aaKnown RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms