RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 HTATSF1O43719 755 aaKnown RBP9.94□□□□□ -0.82
SDCBP-206ENST00000519115 TMPOP42166 694 aaKnown RBP9.94□□□□□ -0.82
SDCBP-206ENST00000519115 RIPK4P57078 832 aa9.94□□□□□ -0.82
SDCBP-206ENST00000519115 ZNF790Q6PG37 636 aa9.94□□□□□ -0.82
SDCBP-206ENST00000519115 COL23A1Q86Y22 540 aaPredicted RBP9.94□□□□□ -0.82
SDCBP-206ENST00000519115 DNAJC10Q8IXB1 793 aa9.94□□□□□ -0.82
SDCBP-206ENST00000519115 RUNDC1Q96C34 613 aa9.94□□□□□ -0.82
SDCBP-206ENST00000519115 ZNF496Q96IT1 587 aaPredicted RBP9.94□□□□□ -0.82
SDCBP-206ENST00000519115 CNTNAP4Q9C0A0 1308 aa9.93□□□□□ -0.82
SDCBP-206ENST00000519115 SENP3-EIF4A1A0A087X0R7 540 aa9.93□□□□□ -0.82
SDCBP-206ENST00000519115 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.93□□□□□ -0.82
SDCBP-206ENST00000519115 CRKLP46109 303 aaKnown RBP9.93□□□□□ -0.82
SDCBP-206ENST00000519115 HNRNPUQ00839 825 aaKnown RBP eCLIP9.93□□□□□ -0.82
SDCBP-206ENST00000519115 MSL1Q68DK7 614 aa9.93□□□□□ -0.82
SDCBP-206ENST00000519115 POTEHQ6S545 545 aa9.93□□□□□ -0.82
SDCBP-206ENST00000519115 MTFR1LQ9H019 292 aa9.93□□□□□ -0.82
SDCBP-206ENST00000519115 MIS18AQ9NYP9 233 aa9.93□□□□□ -0.82
SDCBP-206ENST00000519115 HEG1Q9ULI3 1381 aa9.92□□□□□ -0.82
SDCBP-206ENST00000519115 SLC34A2O95436 690 aa9.92□□□□□ -0.82
SDCBP-206ENST00000519115 HMGB2P26583 209 aaKnown RBP9.92□□□□□ -0.82
SDCBP-206ENST00000519115 CCDC27Q2M243 656 aa9.92□□□□□ -0.82
SDCBP-206ENST00000519115 PPP1R1BQ9UD71 204 aaPredicted RBP9.92□□□□□ -0.82
SDCBP-206ENST00000519115 APAF1O14727 1248 aa9.91□□□□□ -0.82
SDCBP-206ENST00000519115 SSFA2P28290 1259 aa9.91□□□□□ -0.82
SDCBP-206ENST00000519115 PTGER2P43116 358 aa9.91□□□□□ -0.82
SDCBP-206ENST00000519115 LMOD3Q0VAK6 560 aa9.91□□□□□ -0.82
SDCBP-206ENST00000519115 TAF7Q15545 349 aaPredicted RBP9.91□□□□□ -0.82
SDCBP-206ENST00000519115 RC3H1Q5TC82 1133 aaKnown RBP9.91□□□□□ -0.82
SDCBP-206ENST00000519115 FMNL2Q96PY5 1086 aa9.91□□□□□ -0.82
SDCBP-206ENST00000519115 CCDC87Q9NVE4 849 aa9.91□□□□□ -0.82
SDCBP-206ENST00000519115 RTCBQ9Y3I0 505 aaKnown RBP9.91□□□□□ -0.82
SDCBP-206ENST00000519115 RPS6KA4O75676 772 aa9.9□□□□□ -0.82
SDCBP-206ENST00000519115 CYP19A1P11511 503 aaPredicted RBP9.9□□□□□ -0.82
SDCBP-206ENST00000519115 INTS5Q6P9B9 1019 aaKnown RBP9.9□□□□□ -0.82
SDCBP-206ENST00000519115 VSIG10Q8N0Z9 540 aa9.9□□□□□ -0.82
SDCBP-206ENST00000519115 FLAD1Q8NFF5 587 aa9.9□□□□□ -0.82
SDCBP-206ENST00000519115 SLC16A10Q8TF71 515 aa9.9□□□□□ -0.82
SDCBP-206ENST00000519115 YTHDC1Q96MU7 727 aaKnown RBP9.9□□□□□ -0.82
SDCBP-206ENST00000519115 TRIM35Q9UPQ4 493 aa9.9□□□□□ -0.82
SDCBP-206ENST00000519115 ZBTB1Q9Y2K1 713 aa9.9□□□□□ -0.82
SDCBP-206ENST00000519115 PRAMEF22A3QJZ6 481 aa9.89□□□□□ -0.83
SDCBP-206ENST00000519115 SGIP1Q9BQI5 828 aa9.89□□□□□ -0.83
SDCBP-206ENST00000519115 SCN7AQ01118 1682 aa9.89□□□□□ -0.83
SDCBP-206ENST00000519115 COL15A1P39059 1388 aa9.88□□□□□ -0.83
SDCBP-206ENST00000519115 SOS1Q07889 1333 aaPredicted RBP9.88□□□□□ -0.83
SDCBP-206ENST00000519115 STARD3NLO95772 234 aa9.88□□□□□ -0.83
SDCBP-206ENST00000519115 CANXP27824 592 aaKnown RBP9.88□□□□□ -0.83
SDCBP-206ENST00000519115 PIP4K2AP48426 406 aaPredicted RBP9.88□□□□□ -0.83
SDCBP-206ENST00000519115 TRAPPC3LQ5T215 181 aa9.88□□□□□ -0.83
SDCBP-206ENST00000519115 WDR63Q8IWG1 891 aa9.88□□□□□ -0.83
SDCBP-206ENST00000519115 ARHGEF1Q92888 912 aaKnown RBP9.88□□□□□ -0.83
SDCBP-206ENST00000519115 SRP68Q9UHB9 627 aaKnown RBP9.88□□□□□ -0.83
SDCBP-206ENST00000519115 TSPYL4Q9UJ04 414 aa9.88□□□□□ -0.83
SDCBP-206ENST00000519115 ZNF330Q9Y3S2 320 aaPredicted RBP9.88□□□□□ -0.83
SDCBP-206ENST00000519115 BCORQ6W2J9 1755 aa9.88□□□□□ -0.83
SDCBP-206ENST00000519115 A1BGP04217 495 aa9.87□□□□□ -0.83
SDCBP-206ENST00000519115 SNRPA1P09661 255 aaKnown RBP9.87□□□□□ -0.83
SDCBP-206ENST00000519115 POLD1P28340 1107 aa9.87□□□□□ -0.83
SDCBP-206ENST00000519115 RFC4P35249 363 aa9.87□□□□□ -0.83
SDCBP-206ENST00000519115 KLHL34Q8N239 644 aa9.87□□□□□ -0.83
SDCBP-206ENST00000519115 ARXQ96QS3 562 aa9.87□□□□□ -0.83
SDCBP-206ENST00000519115 LAS1LQ9Y4W2 734 aaKnown RBP9.87□□□□□ -0.83
SDCBP-206ENST00000519115 USP16Q9Y5T5 823 aa9.87□□□□□ -0.83
SDCBP-206ENST00000519115 ZNF521Q96K83 1311 aa9.86□□□□□ -0.83
SDCBP-206ENST00000519115 EIF4A1P60842 406 aaKnown RBP9.86□□□□□ -0.83
SDCBP-206ENST00000519115 TEX13AQ9BXU3 409 aaPredicted RBP9.86□□□□□ -0.83
SDCBP-206ENST00000519115 FHDC1Q9C0D6 1143 aaPredicted RBP9.86□□□□□ -0.83
SDCBP-206ENST00000519115 PCDH10Q9P2E7 1040 aa9.86□□□□□ -0.83
SDCBP-206ENST00000519115 AFDNP55196 1824 aaKnown RBP9.86□□□□□ -0.83
SDCBP-206ENST00000519115 USP42Q9H9J4 1324 aaKnown RBP9.85□□□□□ -0.83
SDCBP-206ENST00000519115 ABCB7O75027 752 aa9.85□□□□□ -0.83
SDCBP-206ENST00000519115 GYS1P13807 737 aa9.85□□□□□ -0.83
SDCBP-206ENST00000519115 TRMT2AQ8IZ69 625 aaKnown RBP9.85□□□□□ -0.83
SDCBP-206ENST00000519115 IL16Q14005 1332 aa9.84□□□□□ -0.83
SDCBP-206ENST00000519115 CHL1O00533 1208 aa9.84□□□□□ -0.83
SDCBP-206ENST00000519115 GIGYF1O75420 1035 aaPredicted RBP9.84□□□□□ -0.83
SDCBP-206ENST00000519115 MMP10P09238 476 aa9.84□□□□□ -0.83
SDCBP-206ENST00000519115 EIF5P55010 431 aaKnown RBP9.84□□□□□ -0.83
SDCBP-206ENST00000519115 CALD1Q05682 793 aaKnown RBP9.84□□□□□ -0.83
SDCBP-206ENST00000519115 GOLGA2Q08379 1002 aa9.84□□□□□ -0.83
SDCBP-206ENST00000519115 FKBP8Q14318 412 aa9.84□□□□□ -0.83
SDCBP-206ENST00000519115 KRT24Q2M2I5 525 aa9.84□□□□□ -0.83
SDCBP-206ENST00000519115 SALL2Q9Y467 1007 aaPredicted RBP9.84□□□□□ -0.83
SDCBP-206ENST00000519115 KIF13BQ9NQT8 1826 aa9.84□□□□□ -0.83
SDCBP-206ENST00000519115 N4BP2Q86UW6 1770 aaPredicted RBP9.83□□□□□ -0.84
SDCBP-206ENST00000519115 NBPF26B4DH59 902 aa9.83□□□□□ -0.84
SDCBP-206ENST00000519115 E9PSI1 815 aa9.83□□□□□ -0.84
SDCBP-206ENST00000519115 ZPR1O75312 459 aa9.83□□□□□ -0.84
SDCBP-206ENST00000519115 ERICH6BQ5W0A0 696 aa9.83□□□□□ -0.84
SDCBP-206ENST00000519115 USPL1Q5W0Q7 1092 aa9.83□□□□□ -0.84
SDCBP-206ENST00000519115 NBPF10Q6P3W6 841 aaKnown RBP9.83□□□□□ -0.84
SDCBP-206ENST00000519115 NBPF15Q8N660 670 aa9.83□□□□□ -0.84
SDCBP-206ENST00000519115 TBC1D2BQ9UPU7 963 aa9.83□□□□□ -0.84
SDCBP-206ENST00000519115 NUP98P52948 1817 aa9.83□□□□□ -0.84
SDCBP-206ENST00000519115 KIAA1551Q9HCM1 1747 aa9.82□□□□□ -0.84
SDCBP-206ENST00000519115 CT47B1P0C2W7 299 aaPredicted RBP9.82□□□□□ -0.84
SDCBP-206ENST00000519115 IL6STP40189 918 aaPredicted RBP9.82□□□□□ -0.84
SDCBP-206ENST00000519115 NPM2Q86SE8 214 aaKnown RBP9.82□□□□□ -0.84
SDCBP-206ENST00000519115 WWC1Q8IX03 1113 aa9.82□□□□□ -0.84
SDCBP-206ENST00000519115 NLGN1Q8N2Q7 840 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms