RNA–Protein interactions for RNA: ENST00000519060.6

MSR1-210, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 5

Gene MSR1, Length 1,009 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-210ENST00000519060 KAT6BQ8WYB5 2073 aa13.22□□□□□ -0.29
MSR1-210ENST00000519060 PTPREP23469 700 aa13.22□□□□□ -0.29
MSR1-210ENST00000519060 PBX2P40425 430 aa13.22□□□□□ -0.29
MSR1-210ENST00000519060 POTEEQ6S8J3 1075 aa13.22□□□□□ -0.29
MSR1-210ENST00000519060 IP6K1Q92551 441 aa13.22□□□□□ -0.29
MSR1-210ENST00000519060 CD163L1Q9NR16 1453 aa13.22□□□□□ -0.29
MSR1-210ENST00000519060 LTV1Q96GA3 475 aaPredicted RBP13.21□□□□□ -0.29
MSR1-210ENST00000519060 TERF2IPQ9NYB0 399 aa13.21□□□□□ -0.29
MSR1-210ENST00000519060 AKAP12Q02952 1782 aa13.21□□□□□ -0.29
MSR1-210ENST00000519060 ARHGAP33O14559 1287 aa13.2□□□□□ -0.3
MSR1-210ENST00000519060 FBLN1P23142 703 aa13.2□□□□□ -0.3
MSR1-210ENST00000519060 KCNQ4P56696 695 aa13.2□□□□□ -0.3
MSR1-210ENST00000519060 TSR1Q2NL82 804 aaKnown RBP13.2□□□□□ -0.3
MSR1-210ENST00000519060 PUS7Q96PZ0 661 aaKnown RBP13.2□□□□□ -0.3
MSR1-210ENST00000519060 MYOM1P52179 1685 aa13.19□□□□□ -0.3
MSR1-210ENST00000519060 WNK3Q9BYP7 1800 aa13.19□□□□□ -0.3
MSR1-210ENST00000519060 ABCC6O95255 1503 aa13.18□□□□□ -0.3
MSR1-210ENST00000519060 GPR162Q16538 588 aa13.18□□□□□ -0.3
MSR1-210ENST00000519060 SLC27A3Q5K4L6 730 aa13.18□□□□□ -0.3
MSR1-210ENST00000519060 SLC16A10Q8TF71 515 aa13.18□□□□□ -0.3
MSR1-210ENST00000519060 KCNK17Q96T54 332 aa13.18□□□□□ -0.3
MSR1-210ENST00000519060 EDC4Q6P2E9 1401 aaKnown RBP13.17□□□□□ -0.3
MSR1-210ENST00000519060 PSEN2P49810 448 aa13.17□□□□□ -0.3
MSR1-210ENST00000519060 CDAN1Q8IWY9 1227 aa13.17□□□□□ -0.3
MSR1-210ENST00000519060 SYTL4Q96C24 671 aaPredicted RBP13.16□□□□□ -0.3
MSR1-210ENST00000519060 TFCP2L1Q9NZI6 479 aa13.16□□□□□ -0.3
MSR1-210ENST00000519060 UTRNP46939 3433 aa13.16□□□□□ -0.3
MSR1-210ENST00000519060 A0A1W2PP64 1363 aa13.16□□□□□ -0.3
MSR1-210ENST00000519060 MAP3K5Q99683 1374 aa13.16□□□□□ -0.3
MSR1-210ENST00000519060 PNPLA7Q6ZV29 1317 aa13.15□□□□□ -0.3
MSR1-210ENST00000519060 HOXC9P31274 260 aa13.15□□□□□ -0.3
MSR1-210ENST00000519060 AMPHP49418 695 aa13.15□□□□□ -0.3
MSR1-210ENST00000519060 ZCRB1Q8TBF4 217 aaKnown RBP13.15□□□□□ -0.3
MSR1-210ENST00000519060 COG3Q96JB2 828 aa13.15□□□□□ -0.3
MSR1-210ENST00000519060 TESK2Q96S53 571 aa13.15□□□□□ -0.3
MSR1-210ENST00000519060 CDHR5Q9HBB8 845 aa13.15□□□□□ -0.3
MSR1-210ENST00000519060 NHSQ6T4R5 1651 aa13.15□□□□□ -0.31
MSR1-210ENST00000519060 MAP3K19Q56UN5 1328 aa13.14□□□□□ -0.31
MSR1-210ENST00000519060 MON2Q7Z3U7 1717 aa13.14□□□□□ -0.31
MSR1-210ENST00000519060 ST20-MTHFSA0A0A6YYL1 179 aa13.14□□□□□ -0.31
MSR1-210ENST00000519060 POLD1P28340 1107 aa13.14□□□□□ -0.31
MSR1-210ENST00000519060 C1QTNF8P60827 252 aa13.14□□□□□ -0.31
MSR1-210ENST00000519060 PPP1R3GB7ZBB8 358 aa13.13□□□□□ -0.31
MSR1-210ENST00000519060 COL9A1P20849 921 aa13.13□□□□□ -0.31
MSR1-210ENST00000519060 BTAF1O14981 1849 aa13.13□□□□□ -0.31
MSR1-210ENST00000519060 NBPF6Q5VWK0 638 aa13.12□□□□□ -0.31
MSR1-210ENST00000519060 GPIHBP1Q8IV16 184 aa13.12□□□□□ -0.31
MSR1-210ENST00000519060 NLGN2Q8NFZ4 835 aa13.12□□□□□ -0.31
MSR1-210ENST00000519060 NBPF4Q96M43 638 aa13.12□□□□□ -0.31
MSR1-210ENST00000519060 NPDC1Q9NQX5 325 aaPredicted RBP13.12□□□□□ -0.31
MSR1-210ENST00000519060 PAPPAQ13219 1627 aa13.12□□□□□ -0.31
MSR1-210ENST00000519060 ANKRD36BQ8N2N9 1353 aa13.11□□□□□ -0.31
MSR1-210ENST00000519060 RRS1Q15050 365 aaKnown RBP13.11□□□□□ -0.31
MSR1-210ENST00000519060 DMRTA1Q5VZB9 504 aa13.11□□□□□ -0.31
MSR1-210ENST00000519060 COL23A1Q86Y22 540 aaPredicted RBP13.11□□□□□ -0.31
MSR1-210ENST00000519060 KRTAP3-3Q9BYR6 98 aa13.11□□□□□ -0.31
MSR1-210ENST00000519060 KRTAP3-2Q9BYR7 98 aa13.11□□□□□ -0.31
MSR1-210ENST00000519060 CCNL1Q9UK58 526 aaPredicted RBP13.11□□□□□ -0.31
MSR1-210ENST00000519060 LTN1O94822 1766 aa13.1□□□□□ -0.31
MSR1-210ENST00000519060 USP54Q70EL1 1684 aa13.1□□□□□ -0.31
MSR1-210ENST00000519060 SENP3-EIF4A1A0A087X0R7 540 aa13.1□□□□□ -0.31
MSR1-210ENST00000519060 FYB1O15117 783 aa13.1□□□□□ -0.31
MSR1-210ENST00000519060 PTGDRQ13258 359 aa13.1□□□□□ -0.31
MSR1-210ENST00000519060 PCDH10Q9P2E7 1040 aa13.1□□□□□ -0.31
MSR1-210ENST00000519060 NSD2O96028 1365 aa13.09□□□□□ -0.31
MSR1-210ENST00000519060 FCHSD2O94868 740 aa13.09□□□□□ -0.31
MSR1-210ENST00000519060 USHBP1Q8N6Y0 703 aa13.09□□□□□ -0.31
MSR1-210ENST00000519060 CHD4Q14839 1912 aa13.09□□□□□ -0.31
MSR1-210ENST00000519060 TONSLQ96HA7 1378 aa13.08□□□□□ -0.31
MSR1-210ENST00000519060 LSM11P83369 360 aaKnown RBP eCLIP13.08□□□□□ -0.32
MSR1-210ENST00000519060 ZBED2Q9BTP6 218 aa13.08□□□□□ -0.32
MSR1-210ENST00000519060 GGNBP2Q9H3C7 697 aa13.08□□□□□ -0.32
MSR1-210ENST00000519060 YBX3P16989 372 aaKnown RBP eCLIP13.07□□□□□ -0.32
MSR1-210ENST00000519060 HSP90AB2PQ58FF8 381 aa13.07□□□□□ -0.32
MSR1-210ENST00000519060 RAPGEF4Q8WZA2 1011 aa13.07□□□□□ -0.32
MSR1-210ENST00000519060 SLC4A5Q9BY07 1137 aa13.07□□□□□ -0.32
MSR1-210ENST00000519060 GPR37O15354 613 aa13.06□□□□□ -0.32
MSR1-210ENST00000519060 GRIN3BO60391 1043 aa13.06□□□□□ -0.32
MSR1-210ENST00000519060 MSL1Q68DK7 614 aa13.06□□□□□ -0.32
MSR1-210ENST00000519060 MEGF6O75095 1541 aa13.06□□□□□ -0.32
MSR1-210ENST00000519060 CGNL1Q0VF96 1302 aa13.06□□□□□ -0.32
MSR1-210ENST00000519060 USP47Q96K76 1375 aa13.06□□□□□ -0.32
MSR1-210ENST00000519060 TATP17735 454 aaPredicted RBP13.05□□□□□ -0.32
MSR1-210ENST00000519060 PRSS12P56730 875 aa13.05□□□□□ -0.32
MSR1-210ENST00000519060 HIC1Q14526 733 aa13.05□□□□□ -0.32
MSR1-210ENST00000519060 TK2O00142 265 aa13.04□□□□□ -0.32
MSR1-210ENST00000519060 GIGYF1O75420 1035 aaPredicted RBP13.04□□□□□ -0.32
MSR1-210ENST00000519060 MPRIPQ6WCQ1 1025 aa13.04□□□□□ -0.32
MSR1-210ENST00000519060 ANKRD13DQ6ZTN6 518 aa13.04□□□□□ -0.32
MSR1-210ENST00000519060 CYP27B1O15528 508 aa13.03□□□□□ -0.32
MSR1-210ENST00000519060 PROX2Q3B8N5 592 aa13.03□□□□□ -0.32
MSR1-210ENST00000519060 CDCA7LQ96GN5 454 aa13.03□□□□□ -0.32
MSR1-210ENST00000519060 RBM27Q9P2N5 1060 aaKnown RBP13.03□□□□□ -0.32
MSR1-210ENST00000519060 VPS9D1Q9Y2B5 631 aa13.03□□□□□ -0.32
MSR1-210ENST00000519060 TRIM6-TRIM34B2RNG4 842 aa13.02□□□□□ -0.33
MSR1-210ENST00000519060 TMF1P82094 1093 aa13.02□□□□□ -0.33
MSR1-210ENST00000519060 SMIM5Q71RC9 77 aa13.02□□□□□ -0.33
MSR1-210ENST00000519060 FLAD1Q8NFF5 587 aa13.02□□□□□ -0.33
MSR1-210ENST00000519060 ZC3H15Q8WU90 426 aaKnown RBP13.02□□□□□ -0.33
MSR1-210ENST00000519060 CD2APQ9Y5K6 639 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms