RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 POTEDQ86YR6 584 aa12.16□□□□□ -0.46
CLN8-203ENST00000518780 DDX21Q9NR30 783 aaKnown RBP eCLIP12.16□□□□□ -0.46
CLN8-203ENST00000518780 LRRC4BQ9NT99 713 aa12.16□□□□□ -0.46
CLN8-203ENST00000518780 CCDC87Q9NVE4 849 aa12.16□□□□□ -0.46
CLN8-203ENST00000518780 KAT6BQ8WYB5 2073 aa12.15□□□□□ -0.46
CLN8-203ENST00000518780 UBR2Q8IWV8 1755 aa12.15□□□□□ -0.46
CLN8-203ENST00000518780 IL6STP40189 918 aaPredicted RBP12.15□□□□□ -0.46
CLN8-203ENST00000518780 CRKLP46109 303 aaKnown RBP12.15□□□□□ -0.46
CLN8-203ENST00000518780 EZH2Q15910 746 aaKnown RBP12.15□□□□□ -0.46
CLN8-203ENST00000518780 INTS5Q6P9B9 1019 aaKnown RBP12.15□□□□□ -0.46
CLN8-203ENST00000518780 FLAD1Q8NFF5 587 aa12.15□□□□□ -0.46
CLN8-203ENST00000518780 RGPD3A6NKT7 1758 aaPredicted RBP12.15□□□□□ -0.46
CLN8-203ENST00000518780 RGPD4Q7Z3J3 1758 aa12.15□□□□□ -0.46
CLN8-203ENST00000518780 CICQ96RK0 1608 aaPredicted RBP12.15□□□□□ -0.47
CLN8-203ENST00000518780 EP400Q96L91 3159 aa12.14□□□□□ -0.47
CLN8-203ENST00000518780 A0A087WZG4 1122 aa12.14□□□□□ -0.47
CLN8-203ENST00000518780 PRAMEF22A3QJZ6 481 aa12.14□□□□□ -0.47
CLN8-203ENST00000518780 RGL2O15211 777 aa12.14□□□□□ -0.47
CLN8-203ENST00000518780 RPS6KA4O75676 772 aa12.14□□□□□ -0.47
CLN8-203ENST00000518780 CENPBP07199 599 aaPredicted RBP12.14□□□□□ -0.47
CLN8-203ENST00000518780 RARSP54136 660 aaKnown RBP12.14□□□□□ -0.47
CLN8-203ENST00000518780 NBPF14Q5TI25 921 aa12.14□□□□□ -0.47
CLN8-203ENST00000518780 DEFB132Q7Z7B7 95 aa12.14□□□□□ -0.47
CLN8-203ENST00000518780 LINC00116Q8NCU8 138 aa12.14□□□□□ -0.47
CLN8-203ENST00000518780 AK7Q96M32 723 aa12.14□□□□□ -0.47
CLN8-203ENST00000518780 RCAN3Q9UKA8 241 aa12.14□□□□□ -0.47
CLN8-203ENST00000518780 VIRMAQ69YN4 1812 aaKnown RBP12.14□□□□□ -0.47
CLN8-203ENST00000518780 A1BGP04217 495 aa12.13□□□□□ -0.47
CLN8-203ENST00000518780 SLC4A2P04920 1241 aa12.13□□□□□ -0.47
CLN8-203ENST00000518780 EIF5P55010 431 aaKnown RBP12.13□□□□□ -0.47
CLN8-203ENST00000518780 PDIA6Q15084 440 aa12.13□□□□□ -0.47
CLN8-203ENST00000518780 RTCBQ9Y3I0 505 aaKnown RBP12.13□□□□□ -0.47
CLN8-203ENST00000518780 TNS1Q9HBL0 1735 aaKnown RBP12.13□□□□□ -0.47
CLN8-203ENST00000518780 LY75O60449 1722 aa12.12□□□□□ -0.47
CLN8-203ENST00000518780 NBPF26B4DH59 902 aa12.12□□□□□ -0.47
CLN8-203ENST00000518780 IPO8O15397 1037 aaKnown RBP12.12□□□□□ -0.47
CLN8-203ENST00000518780 DDX58O95786 925 aaKnown RBP12.12□□□□□ -0.47
CLN8-203ENST00000518780 SSFA2P28290 1259 aa12.12□□□□□ -0.47
CLN8-203ENST00000518780 NBPF10Q6P3W6 841 aaKnown RBP12.12□□□□□ -0.47
CLN8-203ENST00000518780 NBPF15Q8N660 670 aa12.12□□□□□ -0.47
CLN8-203ENST00000518780 SSH1Q8WYL5 1049 aa12.12□□□□□ -0.47
CLN8-203ENST00000518780 ARHGAP45Q92619 1136 aa12.12□□□□□ -0.47
CLN8-203ENST00000518780 AKT1S1Q96B36 256 aa12.12□□□□□ -0.47
CLN8-203ENST00000518780 SMC4Q9NTJ3 1288 aa12.12□□□□□ -0.47
CLN8-203ENST00000518780 STK32BQ9NY57 414 aa12.12□□□□□ -0.47
CLN8-203ENST00000518780 CHPF2Q9P2E5 772 aa12.12□□□□□ -0.47
CLN8-203ENST00000518780 KIF16BQ96L93 1317 aa12.11□□□□□ -0.47
CLN8-203ENST00000518780 GNPATO15228 680 aa12.11□□□□□ -0.47
CLN8-203ENST00000518780 CANXP27824 592 aaKnown RBP12.11□□□□□ -0.47
CLN8-203ENST00000518780 KCNQ4P56696 695 aa12.11□□□□□ -0.47
CLN8-203ENST00000518780 SLC15A2Q16348 729 aa12.11□□□□□ -0.47
CLN8-203ENST00000518780 TRAPPC3LQ5T215 181 aa12.11□□□□□ -0.47
CLN8-203ENST00000518780 LRP10Q7Z4F1 713 aa12.11□□□□□ -0.47
CLN8-203ENST00000518780 MRPL50Q8N5N7 158 aaKnown RBP12.11□□□□□ -0.47
CLN8-203ENST00000518780 ZBTB1Q9Y2K1 713 aa12.11□□□□□ -0.47
CLN8-203ENST00000518780 PTPRCP08575 1304 aa12.11□□□□□ -0.47
CLN8-203ENST00000518780 C5P01031 1676 aa12.1□□□□□ -0.47
CLN8-203ENST00000518780 ERVV-1B6SEH8 477 aa12.1□□□□□ -0.47
CLN8-203ENST00000518780 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.1□□□□□ -0.47
CLN8-203ENST00000518780 NECTIN2Q92692 538 aa12.1□□□□□ -0.47
CLN8-203ENST00000518780 TFCP2L1Q9NZI6 479 aa12.1□□□□□ -0.47
CLN8-203ENST00000518780 SOCS7O14512 581 aa12.09□□□□□ -0.47
CLN8-203ENST00000518780 MS4A1P11836 297 aa12.09□□□□□ -0.47
CLN8-203ENST00000518780 MYL6BP14649 208 aa12.09□□□□□ -0.47
CLN8-203ENST00000518780 FLIIQ13045 1269 aa12.09□□□□□ -0.47
CLN8-203ENST00000518780 MAPK8IP2Q13387 824 aaPredicted RBP12.09□□□□□ -0.47
CLN8-203ENST00000518780 PROSER3Q2NL68 480 aa12.08□□□□□ -0.48
CLN8-203ENST00000518780 CLEC4GQ6UXB4 293 aa12.08□□□□□ -0.48
CLN8-203ENST00000518780 KIF6Q6ZMV9 814 aa12.08□□□□□ -0.48
CLN8-203ENST00000518780 ANKRD13DQ6ZTN6 518 aa12.08□□□□□ -0.48
CLN8-203ENST00000518780 COPS6Q7L5N1 327 aa12.08□□□□□ -0.48
CLN8-203ENST00000518780 PLBD2Q8NHP8 589 aa12.08□□□□□ -0.48
CLN8-203ENST00000518780 API5Q9BZZ5 524 aaKnown RBP12.08□□□□□ -0.48
CLN8-203ENST00000518780 COL15A1P39059 1388 aa12.07□□□□□ -0.48
CLN8-203ENST00000518780 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.07□□□□□ -0.48
CLN8-203ENST00000518780 ZPR1O75312 459 aa12.07□□□□□ -0.48
CLN8-203ENST00000518780 RFC4P35249 363 aa12.07□□□□□ -0.48
CLN8-203ENST00000518780 TJP1Q07157 1748 aa12.07□□□□□ -0.48
CLN8-203ENST00000518780 HSP90AB3PQ58FF7 597 aa12.07□□□□□ -0.48
CLN8-203ENST00000518780 ZKSCAN2Q63HK3 967 aa12.07□□□□□ -0.48
CLN8-203ENST00000518780 KSR2Q6VAB6 950 aa12.07□□□□□ -0.48
CLN8-203ENST00000518780 DZIP3Q86Y13 1208 aaKnown RBP12.07□□□□□ -0.48
CLN8-203ENST00000518780 XAGE3Q8WTP9 111 aa12.07□□□□□ -0.48
CLN8-203ENST00000518780 ARHGEF1Q92888 912 aaKnown RBP12.07□□□□□ -0.48
CLN8-203ENST00000518780 NARFQ9UHQ1 456 aa12.07□□□□□ -0.48
CLN8-203ENST00000518780 ZNF652Q9Y2D9 606 aa12.07□□□□□ -0.48
CLN8-203ENST00000518780 MAP3K15Q6ZN16 1313 aa12.07□□□□□ -0.48
CLN8-203ENST00000518780 C4BP0C0L5 1744 aa12.06□□□□□ -0.48
CLN8-203ENST00000518780 LAMB4A4D0S4 1761 aa12.06□□□□□ -0.48
CLN8-203ENST00000518780 TCERG1O14776 1098 aaKnown RBP12.06□□□□□ -0.48
CLN8-203ENST00000518780 BCAR3O75815 825 aa12.06□□□□□ -0.48
CLN8-203ENST00000518780 FKBP5Q13451 457 aaPredicted RBP12.06□□□□□ -0.48
CLN8-203ENST00000518780 ZNF827Q17R98 1081 aa12.06□□□□□ -0.48
CLN8-203ENST00000518780 SLC16A10Q8TF71 515 aa12.06□□□□□ -0.48
CLN8-203ENST00000518780 PHAXQ9H814 394 aaKnown RBP12.06□□□□□ -0.48
CLN8-203ENST00000518780 NOB1Q9ULX3 412 aaKnown RBP12.06□□□□□ -0.48
CLN8-203ENST00000518780 ZNF330Q9Y3S2 320 aaPredicted RBP12.06□□□□□ -0.48
CLN8-203ENST00000518780 ANXA1P04083 346 aa12.05□□□□□ -0.48
CLN8-203ENST00000518780 PIP4K2AP48426 406 aaPredicted RBP12.05□□□□□ -0.48
CLN8-203ENST00000518780 AIMP1Q12904 312 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms